FFCP PHASE1:Hg19::chr20:25038752..25038785,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000542!4.27e-15!53;CL:0000051!4.27e-15!53;CL:0000838!4.72e-15!52;CL:0000037!1.25e-12!172;CL:0000566!1.25e-12!172;CL:0000988!1.45e-12!182;CL:0000738!3.58e-11!140;CL:0002032!5.23e-11!165;CL:0000837!5.23e-11!165;CL:0002087!1.34e-10!119;CL:0002031!2.96e-10!124;CL:0000084!3.84e-09!25;CL:0000827!3.84e-09!25;CL:0000791!4.93e-08!18;CL:0000789!4.93e-08!18;CL:0002420!4.93e-08!18;CL:0002419!4.93e-08!18;CL:0000790!4.93e-08!18;CL:0000236!1.44e-07!14 | |ontology_enrichment_celltype=CL:0000542!4.27e-15!53;CL:0000051!4.27e-15!53;CL:0000838!4.72e-15!52;CL:0000037!1.25e-12!172;CL:0000566!1.25e-12!172;CL:0000988!1.45e-12!182;CL:0000738!3.58e-11!140;CL:0002032!5.23e-11!165;CL:0000837!5.23e-11!165;CL:0002087!1.34e-10!119;CL:0002031!2.96e-10!124;CL:0000084!3.84e-09!25;CL:0000827!3.84e-09!25;CL:0000791!4.93e-08!18;CL:0000789!4.93e-08!18;CL:0002420!4.93e-08!18;CL:0002419!4.93e-08!18;CL:0000790!4.93e-08!18;CL:0000236!1.44e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.43e-09;53!CL:0000084;3.33e-09;25!CL:0000791;4.48e-08;18!CL:0000789;4.48e-08;18!CL:0002419;4.48e-08;18!CL:0000236;1.32e-07;13 | |ontology_enrichment_celltype_v019=CL:0000542;1.43e-09;53!CL:0000084;3.33e-09;25!CL:0000791;4.48e-08;18!CL:0000789;4.48e-08;18!CL:0002419;4.48e-08;18!CL:0000236;1.32e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.92e-15,53;CL:0000051,3.92e-15,53;CL:0000838,4.34e-15,52;CL:0000037,2.93e-14,168;CL:0000988,3.10e-14,177;CL:0000738,6.46e-13,136;CL:0002087,1.51e-12,115;CL:0002032,1.57e-12,161;CL:0000837,1.57e-12,161;CL:0002031,5.14e-12,120;CL:0000084,3.36e-09,25;CL:0000827,3.36e-09,25;CL:0000791,4.41e-08,18;CL:0000789,4.41e-08,18;CL:0002420,4.41e-08,18;CL:0002419,4.41e-08,18;CL:0000790,4.41e-08,18;CL:0000236,1.30e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.43e-09;53!CL:0000790;4.48e-08;18 | |ontology_enrichment_development_v019=CL:0000051;1.43e-09;53!CL:0000790;4.48e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-41!115;UBERON:0001049!2.24e-18!57;UBERON:0005068!2.24e-18!57;UBERON:0006241!2.24e-18!57;UBERON:0007135!2.24e-18!57;UBERON:0002616!2.36e-16!59;UBERON:0003080!5.55e-14!42;UBERON:0002780!8.88e-14!41;UBERON:0001890!8.88e-14!41;UBERON:0006240!8.88e-14!41;UBERON:0000955!8.43e-13!69;UBERON:0006238!8.43e-13!69;UBERON:0001893!1.01e-12!34;UBERON:0002020!1.59e-12!34;UBERON:0003528!1.59e-12!34;UBERON:0002791!2.63e-12!33;UBERON:0001017!8.08e-12!82;UBERON:0001869!8.09e-12!32;UBERON:0002346!1.14e-11!90;UBERON:0005743!4.97e-11!86;UBERON:0003075!5.18e-11!86;UBERON:0007284!5.18e-11!86;UBERON:0002619!5.64e-11!22;UBERON:0000073!3.24e-10!94;UBERON:0001016!3.24e-10!94;UBERON:0001950!9.04e-10!20;UBERON:0000956!2.09e-08!25;UBERON:0000203!2.09e-08!25;UBERON:0003056!9.72e-08!61 | |ontology_enrichment_uberon=UBERON:0007023!2.04e-41!115;UBERON:0001049!2.24e-18!57;UBERON:0005068!2.24e-18!57;UBERON:0006241!2.24e-18!57;UBERON:0007135!2.24e-18!57;UBERON:0002616!2.36e-16!59;UBERON:0003080!5.55e-14!42;UBERON:0002780!8.88e-14!41;UBERON:0001890!8.88e-14!41;UBERON:0006240!8.88e-14!41;UBERON:0000955!8.43e-13!69;UBERON:0006238!8.43e-13!69;UBERON:0001893!1.01e-12!34;UBERON:0002020!1.59e-12!34;UBERON:0003528!1.59e-12!34;UBERON:0002791!2.63e-12!33;UBERON:0001017!8.08e-12!82;UBERON:0001869!8.09e-12!32;UBERON:0002346!1.14e-11!90;UBERON:0005743!4.97e-11!86;UBERON:0003075!5.18e-11!86;UBERON:0007284!5.18e-11!86;UBERON:0002619!5.64e-11!22;UBERON:0000073!3.24e-10!94;UBERON:0001016!3.24e-10!94;UBERON:0001950!9.04e-10!20;UBERON:0000956!2.09e-08!25;UBERON:0000203!2.09e-08!25;UBERON:0003056!9.72e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.92e-12;114!UBERON:0002619;4.22e-11;22!UBERON:0001893;4.96e-11;34!UBERON:0003528;9.06e-11;34!UBERON:0002020;9.06e-11;34!UBERON:0001869;9.29e-11;32!UBERON:0002791;9.69e-11;32!UBERON:0002780;2.18e-10;41!UBERON:0001890;2.18e-10;41!UBERON:0000073;6.34e-10;53!UBERON:0002616;6.34e-10;53!UBERON:0001950;6.93e-10;20!UBERON:0000956;1.87e-08;25!UBERON:0000203;1.87e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0007023;9.92e-12;114!UBERON:0002619;4.22e-11;22!UBERON:0001893;4.96e-11;34!UBERON:0003528;9.06e-11;34!UBERON:0002020;9.06e-11;34!UBERON:0001869;9.29e-11;32!UBERON:0002791;9.69e-11;32!UBERON:0002780;2.18e-10;41!UBERON:0001890;2.18e-10;41!UBERON:0000073;6.34e-10;53!UBERON:0002616;6.34e-10;53!UBERON:0001950;6.93e-10;20!UBERON:0000956;1.87e-08;25!UBERON:0000203;1.87e-08;25 | ||
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| ||
|short_description=p1@ACSS1 | |short_description=p1@ACSS1 | ||
}} | }} |
Revision as of 02:13, 19 November 2012
Short description: | p1@ACSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ACSS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000323482, NM_001252675, NM_001252677, NM_032501_5end |
EntrezGene: | ACSS1 |
HGNC: | 16091 |
UniProt: | Q9NUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.92e-15 | 53 |
common lymphoid progenitor | 3.92e-15 | 53 |
lymphoid lineage restricted progenitor cell | 4.34e-15 | 52 |
hematopoietic stem cell | 2.93e-14 | 168 |
hematopoietic cell | 3.10e-14 | 177 |
leukocyte | 6.46e-13 | 136 |
nongranular leukocyte | 1.51e-12 | 115 |
hematopoietic oligopotent progenitor cell | 1.57e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 5.14e-12 | 120 |
T cell | 3.36e-09 | 25 |
pro-T cell | 3.36e-09 | 25 |
mature alpha-beta T cell | 4.41e-08 | 18 |
alpha-beta T cell | 4.41e-08 | 18 |
immature T cell | 4.41e-08 | 18 |
mature T cell | 4.41e-08 | 18 |
immature alpha-beta T cell | 4.41e-08 | 18 |
B cell | 1.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.88e-41 | 114 |
neural tube | 2.85e-18 | 56 |
neural rod | 2.85e-18 | 56 |
future spinal cord | 2.85e-18 | 56 |
neural keel | 2.85e-18 | 56 |
regional part of nervous system | 2.44e-17 | 53 |
regional part of brain | 2.44e-17 | 53 |
regional part of forebrain | 7.46e-14 | 41 |
forebrain | 7.46e-14 | 41 |
anterior neural tube | 7.46e-14 | 41 |
future forebrain | 7.46e-14 | 41 |
telencephalon | 8.67e-13 | 34 |
brain | 1.14e-12 | 68 |
future brain | 1.14e-12 | 68 |
brain grey matter | 1.37e-12 | 34 |
gray matter | 1.37e-12 | 34 |
neurectoderm | 2.27e-12 | 86 |
cerebral hemisphere | 7.04e-12 | 32 |
regional part of telencephalon | 7.60e-12 | 32 |
central nervous system | 1.02e-11 | 81 |
neural plate | 1.06e-11 | 82 |
presumptive neural plate | 1.06e-11 | 82 |
regional part of cerebral cortex | 4.79e-11 | 22 |
nervous system | 1.27e-10 | 89 |
neocortex | 7.83e-10 | 20 |
cerebral cortex | 1.93e-08 | 25 |
pallium | 1.93e-08 | 25 |
pre-chordal neural plate | 6.50e-08 | 61 |
ecto-epithelium | 4.58e-07 | 104 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.