FFCP PHASE1:Hg19::chr3:119013160..119013180,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.86e-18!180;CL:0000057!1.37e-09!75;CL:0000048!3.99e-09!430;CL:0000680!9.10e-09!57;CL:0000056!9.10e-09!57;CL:0000355!9.10e-09!57;CL:0000183!1.01e-08!59;CL:0000723!1.59e-08!436;CL:0000187!4.83e-08!54;CL:0000034!5.09e-08!444;CL:0000557!1.67e-07!71;CL:0002009!5.95e-07!65 | |ontology_enrichment_celltype=CL:0000055!2.86e-18!180;CL:0000057!1.37e-09!75;CL:0000048!3.99e-09!430;CL:0000680!9.10e-09!57;CL:0000056!9.10e-09!57;CL:0000355!9.10e-09!57;CL:0000183!1.01e-08!59;CL:0000723!1.59e-08!436;CL:0000187!4.83e-08!54;CL:0000034!5.09e-08!444;CL:0000557!1.67e-07!71;CL:0002009!5.95e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.47e-11;33!CL:0002057;7.47e-11;33!CL:0000473;1.55e-09;39!CL:0000234;1.55e-09;39 | |ontology_enrichment_celltype_v019=CL:0000860;7.47e-11;33!CL:0002057;7.47e-11;33!CL:0000473;1.55e-09;39!CL:0000234;1.55e-09;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.65e-12,427;CL:0000723,4.02e-11,433;CL:0000034,1.81e-10,441;CL:0000557,7.08e-10,67;CL:0002009,8.39e-09,61;CL:0000680,1.27e-08,58;CL:0000056,1.27e-08,58;CL:0000355,1.27e-08,58;CL:0000839,1.88e-08,66;CL:0000057,3.13e-08,76;CL:0000187,8.72e-08,55;CL:0000473,8.94e-08,48;CL:0000234,8.94e-08,48;CL:0002194,9.48e-08,59;CL:0000576,9.48e-08,59;CL:0000040,9.48e-08,59;CL:0000559,9.48e-08,59;CL:0000219,1.72e-07,386;CL:0002320,1.76e-07,361;CL:0000860,9.11e-07,42;CL:0002057,9.11e-07,42;CL:0000134,9.48e-07,354 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.45e-14!167;UBERON:0000468!2.80e-11!659;UBERON:0000467!2.58e-09!625;UBERON:0000480!3.14e-09!626;UBERON:0000914!3.23e-09!83;UBERON:0002329!3.23e-09!83;UBERON:0003077!3.23e-09!83;UBERON:0003059!3.23e-09!83;UBERON:0007282!3.23e-09!83;UBERON:0009618!3.23e-09!83;UBERON:0007285!3.23e-09!83;UBERON:0004290!9.15e-09!70;UBERON:0000062!2.27e-08!511;UBERON:0002616!9.76e-08!59;UBERON:0002385!1.59e-07!63;UBERON:0001015!1.59e-07!63;UBERON:0000383!1.59e-07!63;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605;UBERON:0001134!1.64e-07!61;UBERON:0002036!1.64e-07!61;UBERON:0003082!1.64e-07!61;UBERON:0000923!2.61e-07!604;UBERON:0005291!2.61e-07!604;UBERON:0006598!2.61e-07!604;UBERON:0002532!2.61e-07!604;UBERON:0004765!2.76e-07!101;UBERON:0001434!2.76e-07!101;UBERON:0000922!2.81e-07!612;UBERON:0001474!4.42e-07!86;UBERON:0000479!5.53e-07!787;UBERON:0001049!7.56e-07!57;UBERON:0005068!7.56e-07!57;UBERON:0006241!7.56e-07!57;UBERON:0007135!7.56e-07!57 | |ontology_enrichment_uberon=UBERON:0002204!1.45e-14!167;UBERON:0000468!2.80e-11!659;UBERON:0000467!2.58e-09!625;UBERON:0000480!3.14e-09!626;UBERON:0000914!3.23e-09!83;UBERON:0002329!3.23e-09!83;UBERON:0003077!3.23e-09!83;UBERON:0003059!3.23e-09!83;UBERON:0007282!3.23e-09!83;UBERON:0009618!3.23e-09!83;UBERON:0007285!3.23e-09!83;UBERON:0004290!9.15e-09!70;UBERON:0000062!2.27e-08!511;UBERON:0002616!9.76e-08!59;UBERON:0002385!1.59e-07!63;UBERON:0001015!1.59e-07!63;UBERON:0000383!1.59e-07!63;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605;UBERON:0001134!1.64e-07!61;UBERON:0002036!1.64e-07!61;UBERON:0003082!1.64e-07!61;UBERON:0000923!2.61e-07!604;UBERON:0005291!2.61e-07!604;UBERON:0006598!2.61e-07!604;UBERON:0002532!2.61e-07!604;UBERON:0004765!2.76e-07!101;UBERON:0001434!2.76e-07!101;UBERON:0000922!2.81e-07!612;UBERON:0001474!4.42e-07!86;UBERON:0000479!5.53e-07!787;UBERON:0001049!7.56e-07!57;UBERON:0005068!7.56e-07!57;UBERON:0006241!7.56e-07!57;UBERON:0007135!7.56e-07!57 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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|phase1_expression=2.72517568905835,2.5692062866918,2.11431606143957,1.0007329835313,0.893922188854576,1.74467704820074,2.53299878168311,1.26343974685366,1.56711376919903,0.491467873003018,1.39560233594486,3.05817920982241,2.37390280405608,1.60896258848061,0.994192127183747,1.34465029290355,1.20538905604795,2.92124036154949,0.487932798790507,8.125989833068,5.71201935483908,8.46327747990837,3.14859585844162,1.64249310087461,1.25542639594803,0.229240217243854,0.246301768349837,0.314843125254717,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0.671746422719773,1.6194683300949,1.80302897343931,2.61716829803216,1.88937971844405,2.42584061187816,3.25400651667958,2.87817521615278,2.16794459626573,2.58923153089935,2.0492856522328,2.12834006899727,2.41321976515633,1.29096936716765,0,1.69418105588344,3.82068610080984,2.9214052977861,1.83650335422542,2.24650318953266,0,1.64925650093358,1.79517291859469,2.55734850319616,3.77272010217159,4.53908179752912,4.35975574296902,1.00499466102697,1.0429658368404,1.3031330682307,4.23779651843358,2.20966581592539,1.26584954976354,0.422510572623884,0.212604299965044,0.209658645508376,1.34794357375794,1.05123824989054,0.48217676009124,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0,0.144824403882799,4.87613732627923,0.670700859703636,0.895037932904712,1.80719576192283,0.50133791063589,1.44846518960824,1.5905718941022,0.973269740605272,2.74150969775797,1.99556457716308,2.10803485663503,1.5062593682237,0.364295288292542,0,2.59637914923747,2.08955684759121,3.0580330919339,0.476981248610684,0,1.11437250398869,0.39752481473341,0.860234595106124,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0.993943903390637,0.759783069987479,1.19168262731897,2.29469296599051,1.41867352879343,1.12135520028461,0,0.49333509683432,3.11211035399766,0.134710672069688,0.980771418680752,3.48122083583342,6.91411109375999,1.64025002283658,1.24864030732128,1.1409436430889,0.896692083310806,1.64408298101271,1.61872944368132,0.98315564691574,1.63323337003915,1.35117749042945,0.826606249406124,3.56400857184616,1.48360157567134,5.46096817162816,0,1.5150250255866,1.7516592782075,0.831192346452549,0.877955241761676,3.0648779579902,0.901428353439581,0.453728732640084,3.22901344239952,1.06778694409284,0.635795703478686,2.40072876867522,3.09157587715317,3.34932702059318,2.60563598864226,2.19409231913646,2.33848812386877,5.80597680761463,2.11714766877288,2.7479829659198,2.13005755509969,1.5112814734146,1.52604533079439,0.193260853163297,0,0,0.121973706129595,0,0,0.414644220061482,0.252320850875628,0,1.56449532329816,1.28648187638577,2.76269842704961,1.39310378409594,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0,1.40241773803446,4.115740113314,0,0,0,0,0,0,1.02940686179115,0.439001141634502,0,0.402115889646523,0.185176890317059,0.651616610620649,2.07986957055916,0,0.231860809950154,2.46558257895225,0.577465791044295,0,0.380508304469197,0,0,1.72351904261178,1.17002132569619,1.93220510975347,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0.766765358330422,0,1.93706554829097,3.52457796419313,2.88239906833923,5.42842463733434,1.46045156871989,0.763976851116555,1.17217447210047,0,1.33675740514321,1.20137223137567,4.57322292208925,2.5790149399433,2.1798003441664,1.68678057388185,1.42198887333556,0,0,2.39344304926383,0,2.31486636835928,0,1.3321108950805,1.85871391755592,0.542621605391443,0,0.977208552881205,1.77695974371273,2.37585561880029,0.602878754119172,0.871533458600294,1.79951384127703,3.64871341923571,1.50677127429638,0,0.479249710983165,2.29723871668228,1.42636905040718,1.30303176000821,2.26023954805422,1.96967059563885,0,0.197030760201927,0,0.128343036279748,5.08189248444927,0,0,0.502548796003046,0,0,0,0,1.59498939234882,2.00068208423871,0.813795071099207,2.28767947683888,3.03329280955175,2.20783381047509,1.63997980989798,4.8151375956435,4.5481500811197,1.03473071292505,1.99267679560631,1.10621501125022,0.781952530212746,2.34961388955289,2.74514739048685,0.206768026122887,0.647142602455851,0.106727557803444,0.606255142892519,0,2.72151263996712,4.21783273291921,6.1384789315225,2.52594084989766,2.94720043288112,1.53512174720011,1.93024705372329,1.48418066444991,1.54209693802656,1.42049380250502,1.23190734020714,1.03850885836724,1.27831416305955,0,0.802025881213139,0,0.459257792658427,1.27463817604702,1.57349297951309,0,0.693138033939733,0,0,0.844413031143006,0,0.340187410553031,1.72732732881711,1.54227252690289,0.541892875087706,2.00675909541941,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.618246069886334,2.38080608527693,2.22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| ||
|short_description=p4@ARHGAP31 | |short_description=p4@ARHGAP31 | ||
}} | }} |
Revision as of 01:30, 19 November 2012
Short description: | p4@ARHGAP31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARHGAP31_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000264245, NM_020754, uc003ecj.3_5end |
EntrezGene: | ARHGAP31 |
HGNC: | 29216 |
UniProt: | Q2M1Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.65e-12 | 427 |
somatic stem cell | 4.02e-11 | 433 |
stem cell | 1.81e-10 | 441 |
granulocyte monocyte progenitor cell | 7.08e-10 | 67 |
macrophage dendritic cell progenitor | 8.39e-09 | 61 |
muscle precursor cell | 1.27e-08 | 58 |
myoblast | 1.27e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-08 | 58 |
myeloid lineage restricted progenitor cell | 1.88e-08 | 66 |
fibroblast | 3.13e-08 | 76 |
muscle cell | 8.72e-08 | 55 |
defensive cell | 8.94e-08 | 48 |
phagocyte | 8.94e-08 | 48 |
monopoietic cell | 9.48e-08 | 59 |
monocyte | 9.48e-08 | 59 |
monoblast | 9.48e-08 | 59 |
promonocyte | 9.48e-08 | 59 |
motile cell | 1.72e-07 | 386 |
connective tissue cell | 1.76e-07 | 361 |
classical monocyte | 9.11e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.11e-07 | 42 |
mesenchymal cell | 9.48e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.30e-16 | 167 |
mesoderm | 2.27e-10 | 315 |
mesoderm-derived structure | 2.27e-10 | 315 |
presumptive mesoderm | 2.27e-10 | 315 |
bone element | 7.07e-10 | 82 |
bone marrow | 3.66e-09 | 76 |
dense mesenchyme tissue | 3.94e-09 | 73 |
skeletal element | 4.26e-09 | 90 |
skeletal system | 7.01e-09 | 100 |
paraxial mesoderm | 9.84e-09 | 72 |
presumptive paraxial mesoderm | 9.84e-09 | 72 |
epithelial vesicle | 1.85e-08 | 78 |
somite | 1.85e-08 | 71 |
presomitic mesoderm | 1.85e-08 | 71 |
presumptive segmental plate | 1.85e-08 | 71 |
dermomyotome | 1.85e-08 | 71 |
trunk paraxial mesoderm | 1.85e-08 | 71 |
tissue | 4.03e-08 | 773 |
germ layer | 9.98e-08 | 560 |
germ layer / neural crest | 9.98e-08 | 560 |
embryonic tissue | 9.98e-08 | 560 |
presumptive structure | 9.98e-08 | 560 |
germ layer / neural crest derived structure | 9.98e-08 | 560 |
epiblast (generic) | 9.98e-08 | 560 |
skeletal muscle tissue | 1.18e-07 | 62 |
striated muscle tissue | 1.18e-07 | 62 |
myotome | 1.18e-07 | 62 |
embryonic structure | 1.35e-07 | 564 |
muscle tissue | 1.63e-07 | 64 |
musculature | 1.63e-07 | 64 |
musculature of body | 1.63e-07 | 64 |
connective tissue | 4.78e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.