FFCP PHASE1:Hg19::chr11:117073740..117073758,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!9.20e-22!180;CL:0000057!4.35e-12!75;CL:0000680!7.66e-12!57;CL:0000056!7.66e-12!57;CL:0000355!7.66e-12!57;CL:0000359!3.38e-11!32;CL:0000187!1.21e-10!54;CL:0000183!2.22e-10!59;CL:0000393!4.47e-10!60;CL:0000211!4.47e-10!60;CL:0000192!7.82e-10!42;CL:0000514!7.82e-10!42;CL:0002334!1.41e-07!12 | |ontology_enrichment_celltype=CL:0000055!9.20e-22!180;CL:0000057!4.35e-12!75;CL:0000680!7.66e-12!57;CL:0000056!7.66e-12!57;CL:0000355!7.66e-12!57;CL:0000359!3.38e-11!32;CL:0000187!1.21e-10!54;CL:0000183!2.22e-10!59;CL:0000393!4.47e-10!60;CL:0000211!4.47e-10!60;CL:0000192!7.82e-10!42;CL:0000514!7.82e-10!42;CL:0002334!1.41e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.28e-11;32!CL:0002334;4.66e-09;12 | |ontology_enrichment_celltype_v019=CL:0000359;6.28e-11;32!CL:0002334;4.66e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-13,76;CL:0000359,1.42e-11,32;CL:0002334,6.16e-09,12;CL:0000192,3.97e-08,43;CL:0000514,3.97e-08,43;CL:0000680,6.33e-08,58;CL:0000056,6.33e-08,58;CL:0000355,6.33e-08,58;CL:0000136,3.34e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.95e-07!14 | |ontology_enrichment_disease=DOID:2394!1.95e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.88e-12!63;UBERON:0001015!3.88e-12!63;UBERON:0000383!3.88e-12!63;UBERON:0000914!5.23e-12!83;UBERON:0002329!5.23e-12!83;UBERON:0003077!5.23e-12!83;UBERON:0003059!5.23e-12!83;UBERON:0007282!5.23e-12!83;UBERON:0009618!5.23e-12!83;UBERON:0007285!5.23e-12!83;UBERON:0001134!1.96e-11!61;UBERON:0002036!1.96e-11!61;UBERON:0003082!1.96e-11!61;UBERON:0005256!6.70e-11!143;UBERON:0004872!1.40e-10!84;UBERON:0004290!1.03e-09!70;UBERON:0002100!1.71e-09!216;UBERON:0001637!7.03e-09!42;UBERON:0003509!7.03e-09!42;UBERON:0004572!7.03e-09!42;UBERON:0004573!2.89e-08!33;UBERON:0004571!2.89e-08!33;UBERON:0000486!5.12e-08!82;UBERON:0001981!6.71e-08!60;UBERON:0007500!6.71e-08!60;UBERON:0004537!6.71e-08!60;UBERON:0006965!6.71e-08!60;UBERON:0003914!1.15e-07!118;UBERON:0002049!4.01e-07!79;UBERON:0007798!4.01e-07!79;UBERON:0000475!8.27e-07!365 | |ontology_enrichment_uberon=UBERON:0002385!3.88e-12!63;UBERON:0001015!3.88e-12!63;UBERON:0000383!3.88e-12!63;UBERON:0000914!5.23e-12!83;UBERON:0002329!5.23e-12!83;UBERON:0003077!5.23e-12!83;UBERON:0003059!5.23e-12!83;UBERON:0007282!5.23e-12!83;UBERON:0009618!5.23e-12!83;UBERON:0007285!5.23e-12!83;UBERON:0001134!1.96e-11!61;UBERON:0002036!1.96e-11!61;UBERON:0003082!1.96e-11!61;UBERON:0005256!6.70e-11!143;UBERON:0004872!1.40e-10!84;UBERON:0004290!1.03e-09!70;UBERON:0002100!1.71e-09!216;UBERON:0001637!7.03e-09!42;UBERON:0003509!7.03e-09!42;UBERON:0004572!7.03e-09!42;UBERON:0004573!2.89e-08!33;UBERON:0004571!2.89e-08!33;UBERON:0000486!5.12e-08!82;UBERON:0001981!6.71e-08!60;UBERON:0007500!6.71e-08!60;UBERON:0004537!6.71e-08!60;UBERON:0006965!6.71e-08!60;UBERON:0003914!1.15e-07!118;UBERON:0002049!4.01e-07!79;UBERON:0007798!4.01e-07!79;UBERON:0000475!8.27e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.59e-09;6!UBERON:0002358;7.59e-09;6!UBERON:0003684;7.59e-09;6!UBERON:0001178;7.59e-09;6!UBERON:0001637;2.06e-07;42!UBERON:0003509;2.06e-07;42!UBERON:0004572;2.06e-07;42!UBERON:0004573;4.52e-07;33!UBERON:0004571;4.52e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0003688;7.59e-09;6!UBERON:0002358;7.59e-09;6!UBERON:0003684;7.59e-09;6!UBERON:0001178;7.59e-09;6!UBERON:0001637;2.06e-07;42!UBERON:0003509;2.06e-07;42!UBERON:0004572;2.06e-07;42!UBERON:0004573;4.52e-07;33!UBERON:0004571;4.52e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.16e-10,42;UBERON:0003509,2.16e-10,42;UBERON:0004572,2.16e-10,42;UBERON:0004872,5.04e-09,83;UBERON:0003688,9.95e-09,6;UBERON:0002358,9.95e-09,6;UBERON:0003684,9.95e-09,6;UBERON:0001178,9.95e-09,6;UBERON:0007500,1.46e-08,59;UBERON:0001981,1.46e-08,59;UBERON:0004537,1.46e-08,59;UBERON:0006965,1.46e-08,59;UBERON:0004573,2.62e-08,33;UBERON:0004571,2.62e-08,33;UBERON:0002385,4.78e-08,64;UBERON:0001015,4.78e-08,64;UBERON:0000383,4.78e-08,64;UBERON:0002049,6.37e-08,78;UBERON:0007798,6.37e-08,78;UBERON:0007524,1.11e-07,73;UBERON:0001134,1.11e-07,62;UBERON:0002036,1.11e-07,62;UBERON:0003082,1.11e-07,62;UBERON:0002329,2.59e-07,71;UBERON:0003059,2.59e-07,71;UBERON:0007282,2.59e-07,71;UBERON:0004290,2.59e-07,71;UBERON:0009618,2.59e-07,71;UBERON:0003077,4.09e-07,72;UBERON:0007285,4.09e-07,72;UBERON:0003914,4.82e-07,117;UBERON:0004535,6.14e-07,109;UBERON:0007503,9.95e-07,78 | |||
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| ||
|short_description=p3@TAGLN | |short_description=p3@TAGLN | ||
}} | }} |
Revision as of 19:12, 18 November 2012
Short description: | p3@TAGLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TAGLN_5end |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | -101bp_to_ENST00000529622_5end |
EntrezGene: | TAGLN |
HGNC: | 11553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-13 | 76 |
vascular associated smooth muscle cell | 1.42e-11 | 32 |
preadipocyte | 6.16e-09 | 12 |
smooth muscle cell | 3.97e-08 | 43 |
smooth muscle myoblast | 3.97e-08 | 43 |
muscle precursor cell | 6.33e-08 | 58 |
myoblast | 6.33e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-08 | 58 |
fat cell | 3.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
artery | 2.16e-10 | 42 |
arterial blood vessel | 2.16e-10 | 42 |
arterial system | 2.16e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 5.04e-09 | 83 |
omentum | 9.95e-09 | 6 |
peritoneum | 9.95e-09 | 6 |
abdominal cavity | 9.95e-09 | 6 |
visceral peritoneum | 9.95e-09 | 6 |
epithelial tube open at both ends | 1.46e-08 | 59 |
blood vessel | 1.46e-08 | 59 |
blood vasculature | 1.46e-08 | 59 |
vascular cord | 1.46e-08 | 59 |
systemic artery | 2.62e-08 | 33 |
systemic arterial system | 2.62e-08 | 33 |
muscle tissue | 4.78e-08 | 64 |
musculature | 4.78e-08 | 64 |
musculature of body | 4.78e-08 | 64 |
vasculature | 6.37e-08 | 78 |
vascular system | 6.37e-08 | 78 |
dense mesenchyme tissue | 1.11e-07 | 73 |
skeletal muscle tissue | 1.11e-07 | 62 |
striated muscle tissue | 1.11e-07 | 62 |
myotome | 1.11e-07 | 62 |
somite | 2.59e-07 | 71 |
presomitic mesoderm | 2.59e-07 | 71 |
presumptive segmental plate | 2.59e-07 | 71 |
dermomyotome | 2.59e-07 | 71 |
trunk paraxial mesoderm | 2.59e-07 | 71 |
paraxial mesoderm | 4.09e-07 | 72 |
presumptive paraxial mesoderm | 4.09e-07 | 72 |
epithelial tube | 4.82e-07 | 117 |
cardiovascular system | 6.14e-07 | 109 |
epithelial vesicle | 9.95e-07 | 78 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.