FFCP PHASE1:Hg19::chr9:37034469..37034474,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000945!5.28e-44!24;CL:0000826!5.28e-44!24;CL:0000236!3.71e-28!14;CL:0000542!4.53e-19!53;CL:0000051!4.53e-19!53;CL:0000838!8.84e-18!52;CL:0002087!2.22e-10!119;CL:0000037!6.23e-09!172;CL:0000566!6.23e-09!172;CL:0000738!8.79e-09!140;CL:0000988!7.04e-08!182;CL:0000817!1.37e-07!3;CL:0002031!2.28e-07!124;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165 | |ontology_enrichment_celltype=CL:0000945!5.28e-44!24;CL:0000826!5.28e-44!24;CL:0000236!3.71e-28!14;CL:0000542!4.53e-19!53;CL:0000051!4.53e-19!53;CL:0000838!8.84e-18!52;CL:0002087!2.22e-10!119;CL:0000037!6.23e-09!172;CL:0000566!6.23e-09!172;CL:0000738!8.79e-09!140;CL:0000988!7.04e-08!182;CL:0000817!1.37e-07!3;CL:0002031!2.28e-07!124;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.77e-85;24!CL:0000236;7.57e-50;13!CL:0000542;1.98e-24;53!CL:0000123;1.41e-08;2!CL:0000242;1.41e-08;2 | |ontology_enrichment_celltype_v019=CL:0000945;2.77e-85;24!CL:0000236;7.57e-50;13!CL:0000542;1.98e-24;53!CL:0000123;1.41e-08;2!CL:0000242;1.41e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.89e-85,24;CL:0000826,1.89e-85,24;CL:0000236,1.02e-53,14;CL:0000542,8.00e-39,53;CL:0000051,8.00e-39,53;CL:0000838,3.34e-36,52;CL:0002087,7.80e-16,115;CL:0000817,2.42e-13,3;CL:0000738,1.80e-12,136;CL:0002031,2.98e-12,120;CL:0000037,7.05e-11,168;CL:0002032,1.36e-10,161;CL:0000837,1.36e-10,161;CL:0000988,5.23e-10,177;CL:0000785,2.31e-09,2;CL:0000955,2.31e-09,2;CL:0000818,2.31e-09,2;CL:0000954,2.31e-09,2;CL:0000816,2.31e-09,2;CL:0000242,1.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.98e-24;53!CL:0000954;2.18e-09;2!UBERON:0004872;8.63e-09;7 | |ontology_enrichment_development_v019=CL:0000051;1.98e-24;53!CL:0000954;2.18e-09;2!UBERON:0004872;8.63e-09;7 | ||
|ontology_enrichment_disease=DOID:0060058!3.61e-10!10 | |ontology_enrichment_disease=DOID:0060058!3.61e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.95e-15;10 | |ontology_enrichment_disease_v019=DOID:0060058;8.95e-15;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.85e-15,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002106;4.92e-12;3!UBERON:0000178;2.82e-11;15!UBERON:0000179;2.82e-11;15!UBERON:0000463;2.82e-11;15!UBERON:0002390;3.02e-11;32!UBERON:0002193;2.78e-08;42!UBERON:0004177;2.13e-07;5!UBERON:0005057;2.13e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;4.92e-12;3!UBERON:0000178;2.82e-11;15!UBERON:0000179;2.82e-11;15!UBERON:0000463;2.82e-11;15!UBERON:0002390;3.02e-11;32!UBERON:0002193;2.78e-08;42!UBERON:0004177;2.13e-07;5!UBERON:0005057;2.13e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.97e-12,3;UBERON:0004854,5.97e-12,3;UBERON:0009034,5.97e-12,3;UBERON:0002095,5.97e-12,3;UBERON:0004782,5.97e-12,3;UBERON:0003281,5.97e-12,3;UBERON:0009664,5.97e-12,3;UBERON:0002296,5.97e-12,3;UBERON:0005602,5.97e-12,3;UBERON:0001179,5.97e-12,3;UBERON:0006293,5.97e-12,3;UBERON:0000178,2.80e-11,15;UBERON:0000179,2.80e-11,15;UBERON:0000463,2.80e-11,15;UBERON:0000945,1.32e-07,8;UBERON:0010039,1.32e-07,8 | |||
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| ||
|short_description=p1@PAX5 | |short_description=p1@PAX5 | ||
}} | }} |
Revision as of 14:54, 18 November 2012
Short description: | p1@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PAX5_5end |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | 1bp_to_ENST00000377849, NM_016734, uc003zzo.1, uc010mlo.1, uc010mlp.1, uc010mlq.1, uc010mlr.1, uc010mls.1, uc011lpw.1, uc011lpx.1, uc011lpy.1, uc011lpz.1, uc011lqa.1, uc011lqb.1, uc011lqc.1_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | E3W992Q02548Q5SFM2Q6S731Q6S730Q6S729Q6S728 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.89e-85 | 24 |
pro-B cell | 1.89e-85 | 24 |
B cell | 1.02e-53 | 14 |
lymphocyte | 8.00e-39 | 53 |
common lymphoid progenitor | 8.00e-39 | 53 |
lymphoid lineage restricted progenitor cell | 3.34e-36 | 52 |
nongranular leukocyte | 7.80e-16 | 115 |
precursor B cell | 2.42e-13 | 3 |
leukocyte | 1.80e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.98e-12 | 120 |
hematopoietic stem cell | 7.05e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.36e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-10 | 161 |
hematopoietic cell | 5.23e-10 | 177 |
mature B cell | 2.31e-09 | 2 |
pre-B-II cell | 2.31e-09 | 2 |
transitional stage B cell | 2.31e-09 | 2 |
small pre-B-II cell | 2.31e-09 | 2 |
immature B cell | 2.31e-09 | 2 |
Merkel cell | 1.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.97e-12 | 3 |
gastrointestinal system mesentery | 5.97e-12 | 3 |
stomach region | 5.97e-12 | 3 |
mesentery | 5.97e-12 | 3 |
gastrointestinal system serosa | 5.97e-12 | 3 |
mesentery of stomach | 5.97e-12 | 3 |
gut mesentery | 5.97e-12 | 3 |
dorsal mesentery | 5.97e-12 | 3 |
dorsal mesogastrium | 5.97e-12 | 3 |
peritoneal cavity | 5.97e-12 | 3 |
spleen primordium | 5.97e-12 | 3 |
blood | 2.80e-11 | 15 |
haemolymphatic fluid | 2.80e-11 | 15 |
organism substance | 2.80e-11 | 15 |
stomach | 1.32e-07 | 8 |
food storage organ | 1.32e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.85e-15 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.