FFCP PHASE1:Hg19::chr12:13256571..13256592,-: Difference between revisions
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|ontology_enrichment_development_v019=CL:0002057;6.74e-66;42!CL:0000049;5.17e-11;108 | |ontology_enrichment_development_v019=CL:0002057;6.74e-66;42!CL:0000049;5.17e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@GSG1 | |short_description=p1@GSG1 | ||
}} | }} |
Revision as of 14:50, 18 November 2012
Short description: | p1@GSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GSG1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000351606, ENST00000432710, ENST00000545401_5end |
EntrezGene: | GSG1 |
HGNC: | 19716 |
UniProt: | G3XAB9F5H0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.47e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.47e-87 | 42 |
defensive cell | 3.35e-75 | 48 |
phagocyte | 3.35e-75 | 48 |
monopoietic cell | 5.02e-59 | 59 |
monocyte | 5.02e-59 | 59 |
monoblast | 5.02e-59 | 59 |
promonocyte | 5.02e-59 | 59 |
macrophage dendritic cell progenitor | 6.14e-57 | 61 |
myeloid lineage restricted progenitor cell | 2.90e-52 | 66 |
granulocyte monocyte progenitor cell | 2.07e-51 | 67 |
myeloid leukocyte | 3.07e-51 | 72 |
myeloid cell | 2.24e-32 | 108 |
common myeloid progenitor | 2.24e-32 | 108 |
nongranular leukocyte | 9.25e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 2.25e-26 | 120 |
leukocyte | 1.50e-24 | 136 |
hematopoietic oligopotent progenitor cell | 7.58e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.58e-20 | 161 |
hematopoietic stem cell | 8.86e-19 | 168 |
hematopoietic cell | 1.57e-17 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.83e-45 | 76 |
bone element | 4.37e-41 | 82 |
skeletal element | 5.72e-37 | 90 |
immune system | 1.32e-35 | 93 |
hematopoietic system | 1.62e-33 | 98 |
blood island | 1.62e-33 | 98 |
skeletal system | 9.71e-33 | 100 |
hemolymphoid system | 6.50e-30 | 108 |
musculoskeletal system | 2.22e-17 | 167 |
lateral plate mesoderm | 1.41e-14 | 203 |
mesoderm | 4.58e-09 | 315 |
mesoderm-derived structure | 4.58e-09 | 315 |
presumptive mesoderm | 4.58e-09 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.