FFCP PHASE1:Hg19::chr9:79057008..79057019,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002541!1.68e-12!3 | |ontology_enrichment_celltype=CL:0002541!1.68e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0000945;2.67e-09;24!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0000945;2.67e-09;24!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.76e-18,3;CL:0000945,2.56e-09,24;CL:0000826,2.56e-09,24;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;3.99e-50;1!DOID:0050177;3.99e-50;1!DOID:0050427;3.99e-50;1!DOID:3910;4.32e-26;2!DOID:4468;7.14e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_disease_v019=DOID:630;3.99e-50;1!DOID:0050177;3.99e-50;1!DOID:0050427;3.99e-50;1!DOID:3910;4.32e-26;2!DOID:4468;7.14e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:630,2.42e-50,1;DOID:0050177,2.42e-50,1;DOID:0050427,2.42e-50,1;DOID:3910,4.32e-26,2;DOID:4468,9.18e-26,2;DOID:3908,2.66e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.68e-12!3;UBERON:0000920!1.68e-12!3;UBERON:0000488!3.57e-09!4 | |ontology_enrichment_uberon=UBERON:0000476!1.68e-12!3;UBERON:0000920!1.68e-12!3;UBERON:0000488!3.57e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.81e-14;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.81e-14;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0.534893840235659,1.14940825229924,0.550975469195755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0.494411622680279,0,0,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,11.4414142631745,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0.593042257361244,0.494255755786011,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0.534893840235659,1.14940825229924,0.550975469195755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0.494411622680279,0,0,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,11.4414142631745,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0.593042257361244,0.494255755786011,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | ||
|short_description=p5@GCNT1 | |short_description=p5@GCNT1 | ||
}} | }} |
Revision as of 13:52, 18 November 2012
Short description: | p5@GCNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GCNT1_5end |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | 426bp_to_ENST00000442371, NM_001097634, uc010mpg.2_5end |
EntrezGene: | GCNT1 |
HGNC: | 4203 |
UniProt: | Q02742Q86T81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.76e-18 | 3 |
lymphocyte of B lineage | 2.56e-09 | 24 |
pro-B cell | 2.56e-09 | 24 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.32e-26 | 2 |
alveolar duct | 4.32e-26 | 2 |
bronchiole | 4.32e-26 | 2 |
pulmonary alveolus epithelium | 6.76e-18 | 3 |
alveolus | 6.76e-18 | 3 |
pulmonary lobule | 6.76e-18 | 3 |
lobule | 6.76e-18 | 3 |
alveolus of lung | 6.76e-18 | 3 |
alveolar system | 6.76e-18 | 3 |
pulmonary acinus | 6.76e-18 | 3 |
alveolar sac | 6.76e-18 | 3 |
alveolar wall | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.42e-50 | 1 |
monogenic disease | 2.42e-50 | 1 |
xeroderma pigmentosum | 2.42e-50 | 1 |
lung adenocarcinoma | 4.32e-26 | 2 |
clear cell adenocarcinoma | 9.18e-26 | 2 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.