FFCP PHASE1:Hg19::chr5:176943630..176943646,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.03e-13!180;CL:0000359!3.04e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.03e-13!180;CL:0000359!3.04e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.39e-20;32!CL:0000192;2.59e-12;43!CL:0002539;6.27e-11;10!CL:0000187;3.75e-08;55!CL:0002596;3.26e-07;2!CL:0002589;4.85e-07;2 | |ontology_enrichment_celltype_v019=CL:0000359;5.39e-20;32!CL:0000192;2.59e-12;43!CL:0002539;6.27e-11;10!CL:0000187;3.75e-08;55!CL:0002596;3.26e-07;2!CL:0002589;4.85e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.72e-21,32;CL:0000192,1.09e-14,43;CL:0000514,1.09e-14,43;CL:0000680,5.58e-13,58;CL:0000056,5.58e-13,58;CL:0000355,5.58e-13,58;CL:0000187,3.00e-12,55;CL:0002539,4.72e-11,10;CL:0000393,1.25e-10,61;CL:0000211,1.25e-10,61;CL:0002596,2.18e-07,2;CL:0002589,4.06e-07,2;CL:0000222,6.80e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.59e-12;43!CL:0000355;4.34e-08;58 | |ontology_enrichment_development_v019=CL:0000514;2.59e-12;43!CL:0000355;4.34e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.86e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;2.86e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.42e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.93e-09!42;UBERON:0003509!1.93e-09!42;UBERON:0004572!1.93e-09!42;UBERON:0004573!8.53e-09!33;UBERON:0004571!8.53e-09!33 | |ontology_enrichment_uberon=UBERON:0001637!1.93e-09!42;UBERON:0003509!1.93e-09!42;UBERON:0004572!1.93e-09!42;UBERON:0004573!8.53e-09!33;UBERON:0004571!8.53e-09!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.42e-14;33!UBERON:0004571;1.42e-14;33!UBERON:0004237;6.27e-11;10!UBERON:0004695;6.27e-11;10!UBERON:0002111;6.27e-11;10!UBERON:0004178;6.27e-11;10!UBERON:0001637;2.26e-10;42!UBERON:0003509;2.26e-10;42!UBERON:0004572;2.26e-10;42!UBERON:0007500;2.45e-07;56!UBERON:0001981;2.45e-07;56!UBERON:0004537;2.45e-07;56!UBERON:0005396;3.26e-07;2!UBERON:0001529;4.85e-07;2!UBERON:0007204;4.85e-07;2!UBERON:0001135;4.96e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.42e-14;33!UBERON:0004571;1.42e-14;33!UBERON:0004237;6.27e-11;10!UBERON:0004695;6.27e-11;10!UBERON:0002111;6.27e-11;10!UBERON:0004178;6.27e-11;10!UBERON:0001637;2.26e-10;42!UBERON:0003509;2.26e-10;42!UBERON:0004572;2.26e-10;42!UBERON:0007500;2.45e-07;56!UBERON:0001981;2.45e-07;56!UBERON:0004537;2.45e-07;56!UBERON:0005396;3.26e-07;2!UBERON:0001529;4.85e-07;2!UBERON:0007204;4.85e-07;2!UBERON:0001135;4.96e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.08e-17,33;UBERON:0004571,1.08e-17,33;UBERON:0001637,3.37e-17,42;UBERON:0003509,3.37e-17,42;UBERON:0004572,3.37e-17,42;UBERON:0004872,1.32e-12,83;UBERON:0007500,1.38e-12,59;UBERON:0001981,1.38e-12,59;UBERON:0004537,1.38e-12,59;UBERON:0006965,1.38e-12,59;UBERON:0001134,7.53e-12,62;UBERON:0002036,7.53e-12,62;UBERON:0003082,7.53e-12,62;UBERON:0000055,1.19e-11,68;UBERON:0002385,2.44e-11,64;UBERON:0001015,2.44e-11,64;UBERON:0000383,2.44e-11,64;UBERON:0004237,4.72e-11,10;UBERON:0004695,4.72e-11,10;UBERON:0002111,4.72e-11,10;UBERON:0004178,4.72e-11,10;UBERON:0002049,7.81e-11,78;UBERON:0007798,7.81e-11,78;UBERON:0003914,5.31e-10,117;UBERON:0002329,8.73e-10,71;UBERON:0003059,8.73e-10,71;UBERON:0007282,8.73e-10,71;UBERON:0004290,8.73e-10,71;UBERON:0009618,8.73e-10,71;UBERON:0003077,1.37e-09,72;UBERON:0007285,1.37e-09,72;UBERON:0007503,1.38e-09,78;UBERON:0007524,2.13e-09,73;UBERON:0004535,3.22e-09,109;UBERON:0001009,7.99e-09,112;UBERON:0000486,9.25e-09,83;UBERON:0005256,1.90e-08,122;UBERON:0005396,2.18e-07,2;UBERON:0001529,4.06e-07,2;UBERON:0007204,4.06e-07,2;UBERON:0001135,4.15e-07,15;UBERON:0000490,8.86e-07,148 | |||
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| ||
|short_description=p7@DDX41 | |short_description=p7@DDX41 | ||
}} | }} |
Revision as of 12:27, 18 November 2012
Short description: | p7@DDX41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_DDX41_5end |
Coexpression cluster: | C2471_basal_Smooth_mucinous_Chondrocyte_H9_Cardiac_Sertoli |
Association with transcript: | -305bp_to_ENST00000504781_5end |
EntrezGene: | DDX41 |
HGNC: | 18674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.72e-21 | 32 |
smooth muscle cell | 1.09e-14 | 43 |
smooth muscle myoblast | 1.09e-14 | 43 |
muscle precursor cell | 5.58e-13 | 58 |
myoblast | 5.58e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.58e-13 | 58 |
muscle cell | 3.00e-12 | 55 |
aortic smooth muscle cell | 4.72e-11 | 10 |
electrically responsive cell | 1.25e-10 | 61 |
electrically active cell | 1.25e-10 | 61 |
smooth muscle cell of the carotid artery | 2.18e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 4.06e-07 | 2 |
mesodermal cell | 6.80e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.42e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.