FFCP PHASE1:Hg19::chr18:74277589..74277595,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!1.10e-14!42;CL:0000860!4.25e-13!45;CL:0002194!3.45e-08!63;CL:0000576!3.45e-08!63;CL:0000040!3.45e-08!63;CL:0000559!3.45e-08!63;CL:0002009!1.08e-07!65;CL:0000766!1.39e-07!76;CL:0000012!2.22e-07!682;CL:0000548!3.70e-07!679;CL:0000004!3.70e-07!679;CL:0000255!3.70e-07!679;CL:0002371!5.99e-07!591;CL:0000144!9.75e-07!625 | |ontology_enrichment_celltype=CL:0002057!1.10e-14!42;CL:0000860!4.25e-13!45;CL:0002194!3.45e-08!63;CL:0000576!3.45e-08!63;CL:0000040!3.45e-08!63;CL:0000559!3.45e-08!63;CL:0002009!1.08e-07!65;CL:0000766!1.39e-07!76;CL:0000012!2.22e-07!682;CL:0000548!3.70e-07!679;CL:0000004!3.70e-07!679;CL:0000255!3.70e-07!679;CL:0002371!5.99e-07!591;CL:0000144!9.75e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002202;7.90e-11;9!CL:0002632;7.90e-11;9!CL:0000307;4.15e-09;3!CL:0000767;9.37e-09;3!CL:0002328;9.37e-09;3!CL:0002174;1.31e-07;1!CL:0000501;1.31e-07;1!CL:0002368;1.59e-07;13!CL:0002601;3.50e-07;1!CL:0002327;3.51e-07;4 | |ontology_enrichment_celltype_v019=CL:0002202;7.90e-11;9!CL:0002632;7.90e-11;9!CL:0000307;4.15e-09;3!CL:0000767;9.37e-09;3!CL:0002328;9.37e-09;3!CL:0002174;1.31e-07;1!CL:0000501;1.31e-07;1!CL:0002368;1.59e-07;13!CL:0002601;3.50e-07;1!CL:0002327;3.51e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.67e-11,9;CL:0002632,4.67e-11,9;CL:0002328,3.92e-09,3;CL:0000068,4.42e-09,3;CL:0000069,4.42e-09,3;CL:0000307,4.42e-09,3;CL:0000377,4.42e-09,3;CL:0000767,7.13e-09,3;CL:0002368,1.12e-07,13;CL:0002174,1.27e-07,1;CL:0000501,1.27e-07,1;CL:0002327,3.52e-07,4;CL:0002601,5.50e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;4.15e-09;3 | |ontology_enrichment_development_v019=CL:0000377;4.15e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3111;3.50e-07;1!DOID:3603;3.50e-07;1 | |ontology_enrichment_disease_v019=DOID:3111;3.50e-07;1!DOID:3603;3.50e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,2.52e-07,1;DOID:3603,2.52e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.37e-09;3!UBERON:0002031;9.37e-09;3!UBERON:0001911;3.51e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004815;9.37e-09;3!UBERON:0002031;9.37e-09;3!UBERON:0001911;3.51e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.92e-09,3;UBERON:0002031,3.92e-09,3;UBERON:0001911,3.52e-07,4;UBERON:0005333,3.52e-07,4;UBERON:0008425,3.52e-07,4;UBERON:0005311,3.52e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,1.96682138424452,0.767658796194425,1.08371286321253,0.919421224478927,1.8072355126695,1.84877005083394,0,0,0.880801318004542,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0.619412741790207,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0,1.60464513538047,1.27867425159808,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,1.47311054395026,0.316462387440884,0.422510572623884,0.850417199860174,1.04829322754188,1.12328631146495,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.448346041655403,0.587172493218824,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0,0,0,0,0.0974370051611986,0.757301322732344,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,2.76269842704961,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86587272649115,2.03443756959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0.206768026122887,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.813472649219715,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.616194468458578,0.15350367472613,0.275673144969061,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0.192190067365106,0.638063562472921,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06428319221179,0,0,0.379473173765715,0.699869440489966,0.48111056362756,1.34060455107157,6.53345909167936,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0.1605880751037,0,0,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,1.55832187032068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.874813840149763,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0,0,0,0,0.596143835108969,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0.288950589901519,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0.959575986597226,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0.999843263696853,0,0,0.705797459094515,0,0,0.298509605773748,0.701139929541673,0,0,0,1.77962244319307,0.457680136793847,0,0.621748802331122,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0.813741466409323,0.181848659202559,0.429642228169954,0,0.796191777397232,0,0,0.336749488765919,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,1.69049698686902,0,0.106691729694141,0,1.70254786070051,0,0.279759015438889,0,0,0.107824811396682,1.72992536041486,0,0,0.850299680406731,0.371807292777007,0,0,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.366857197043358,1.38630799380406,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0.496211178389294,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0.207216164163037,0,0,0,0.946656005844523,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,3.8614456457388,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,1.96682138424452,0.767658796194425,1.08371286321253,0.919421224478927,1.8072355126695,1.84877005083394,0,0,0.880801318004542,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0.619412741790207,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0,1.60464513538047,1.27867425159808,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,1.47311054395026,0.316462387440884,0.422510572623884,0.850417199860174,1.04829322754188,1.12328631146495,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.448346041655403,0.587172493218824,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0,0,0,0,0.0974370051611986,0.757301322732344,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,2.76269842704961,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86587272649115,2.03443756959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0.206768026122887,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.813472649219715,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.616194468458578,0.15350367472613,0.275673144969061,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0.192190067365106,0.638063562472921,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06428319221179,0,0,0.379473173765715,0.699869440489966,0.48111056362756,1.34060455107157,6.53345909167936,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0.1605880751037,0,0,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,1.55832187032068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.874813840149763,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0,0,0,0,0.596143835108969,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0.288950589901519,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0.959575986597226,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0.999843263696853,0,0,0.705797459094515,0,0,0.298509605773748,0.701139929541673,0,0,0,1.77962244319307,0.457680136793847,0,0.621748802331122,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0.813741466409323,0.181848659202559,0.429642228169954,0,0.796191777397232,0,0,0.336749488765919,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,1.69049698686902,0,0.106691729694141,0,1.70254786070051,0,0.279759015438889,0,0,0.107824811396682,1.72992536041486,0,0,0.850299680406731,0.371807292777007,0,0,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.366857197043358,1.38630799380406,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0.496211178389294,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0.207216164163037,0,0,0,0.946656005844523,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,3.8614456457388,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:74277589..74277595,- | |short_description=p@chr18:74277589..74277595,- | ||
}} | }} |
Revision as of 09:36, 18 November 2012
Short description: | p@chr18:74277589..74277595, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:74277589..74277595, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.67e-11 | 9 |
epithelial cell of lower respiratory tract | 4.67e-11 | 9 |
bronchial epithelial cell | 3.92e-09 | 3 |
duct epithelial cell | 4.42e-09 | 3 |
branched duct epithelial cell | 4.42e-09 | 3 |
tracheal epithelial cell | 4.42e-09 | 3 |
tracheoblast | 4.42e-09 | 3 |
basophil | 7.13e-09 | 3 |
respiratory epithelial cell | 1.12e-07 | 13 |
follicular cell of ovary | 1.27e-07 | 1 |
granulosa cell | 1.27e-07 | 1 |
mammary gland epithelial cell | 3.52e-07 | 4 |
uterine smooth muscle cell | 5.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.92e-09 | 3 |
epithelium of bronchus | 3.92e-09 | 3 |
mammary gland | 3.52e-07 | 4 |
mammary bud | 3.52e-07 | 4 |
mammary ridge | 3.52e-07 | 4 |
mammary placode | 3.52e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.52e-07 | 1 |
mucinous cystadenocarcinoma | 2.52e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.