FFCP PHASE1:Hg19::chr12:53298570..53298600,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!3.31e-47!254;CL:0000223!1.08e-14!59;CL:0000077!4.45e-13!19;CL:0002076!1.26e-09!43;CL:1000507!5.68e-07!12;CL:1000494!5.68e-07!12 | |ontology_enrichment_celltype=CL:0000066!3.31e-47!254;CL:0000223!1.08e-14!59;CL:0000077!4.45e-13!19;CL:0002076!1.26e-09!43;CL:1000507!5.68e-07!12;CL:1000494!5.68e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.13e-17;19!CL:0000349;1.86e-14;19!CL:1000507;1.49e-08;10!CL:1000494;1.49e-08;10 | |ontology_enrichment_celltype_v019=CL:0000077;5.13e-17;19!CL:0000349;1.86e-14;19!CL:1000507;1.49e-08;10!CL:1000494;1.49e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.38e-34,253;CL:0000077,7.33e-17,19;CL:0000349,1.43e-14,19;CL:0000223,1.56e-09,58;CL:1000507,1.41e-08,10;CL:1000494,1.41e-08,10;CL:1000449,9.88e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.09e-07;29 | |ontology_enrichment_development_v019=UBERON:0008947;4.09e-07;29 | ||
|ontology_enrichment_disease=DOID:305!1.13e-32!106;DOID:0050687!4.77e-25!143;DOID:162!2.02e-16!235;DOID:14566!9.22e-16!239;DOID:299!9.31e-11!25 | |ontology_enrichment_disease=DOID:305!1.13e-32!106;DOID:0050687!4.77e-25!143;DOID:162!2.02e-16!235;DOID:14566!9.22e-16!239;DOID:299!9.31e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:299;5.65e-11;25!DOID:305;6.58e-08;106 | |ontology_enrichment_disease_v019=DOID:299;5.65e-11;25!DOID:305;6.58e-08;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.43e-21,106;DOID:0050687,2.12e-16,143;DOID:299,4.52e-11,25;DOID:162,8.11e-11,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.21e-22!169;UBERON:0000925!2.21e-22!169;UBERON:0006595!2.21e-22!169;UBERON:0004921!8.60e-19!129;UBERON:0004185!8.60e-19!129;UBERON:0001007!3.13e-18!155;UBERON:0001555!3.13e-18!155;UBERON:0007026!3.13e-18!155;UBERON:0000077!4.24e-17!130;UBERON:0001048!7.33e-16!168;UBERON:0000466!1.29e-15!126;UBERON:0003104!2.82e-14!238;UBERON:0009142!2.82e-14!238;UBERON:0001041!8.05e-14!98;UBERON:0005177!1.07e-13!107;UBERON:0000464!3.12e-12!104;UBERON:0005911!8.52e-12!82;UBERON:0000481!2.51e-11!347;UBERON:0005172!6.91e-11!55;UBERON:0005173!6.91e-11!55;UBERON:0006554!1.90e-10!44;UBERON:0008947!3.37e-10!38;UBERON:0003258!3.37e-10!38;UBERON:0009569!3.70e-10!113;UBERON:0001008!5.61e-10!45;UBERON:0000065!2.61e-09!53;UBERON:0000058!2.67e-09!26;UBERON:0002113!5.25e-09!27;UBERON:0003918!5.25e-09!27;UBERON:0005095!5.25e-09!27;UBERON:0007687!5.25e-09!27;UBERON:0005631!7.55e-09!14;UBERON:0000158!7.55e-09!14;UBERON:0002417!1.28e-08!61;UBERON:0000916!1.28e-08!61;UBERON:0002553!2.32e-08!70;UBERON:0000072!2.78e-08!46;UBERON:0000478!5.33e-08!24;UBERON:0003886!7.27e-08!63;UBERON:0001737!7.33e-08!9;UBERON:0000489!9.00e-08!32;UBERON:0001004!1.27e-07!72;UBERON:0003103!2.85e-07!69;UBERON:0003124!2.86e-07!7;UBERON:0003929!4.20e-07!54;UBERON:0000080!4.80e-07!18;UBERON:0002120!4.80e-07!18;UBERON:0004875!4.80e-07!18;UBERON:0005721!4.80e-07!18;UBERON:0005754!4.80e-07!18;UBERON:0007297!4.80e-07!18;UBERON:0009773!5.68e-07!12;UBERON:0001231!5.68e-07!12;UBERON:0004810!5.68e-07!12;UBERON:0005156!6.75e-07!59;UBERON:0000990!6.75e-07!59;UBERON:0006555!9.09e-07!17;UBERON:0005103!9.09e-07!17;UBERON:0000083!9.09e-07!17;UBERON:0009201!9.09e-07!17;UBERON:0004819!9.09e-07!17;UBERON:0006553!9.09e-07!17;UBERON:0003074!9.09e-07!17;UBERON:0003060!9.09e-07!17 | |ontology_enrichment_uberon=UBERON:0004119!2.21e-22!169;UBERON:0000925!2.21e-22!169;UBERON:0006595!2.21e-22!169;UBERON:0004921!8.60e-19!129;UBERON:0004185!8.60e-19!129;UBERON:0001007!3.13e-18!155;UBERON:0001555!3.13e-18!155;UBERON:0007026!3.13e-18!155;UBERON:0000077!4.24e-17!130;UBERON:0001048!7.33e-16!168;UBERON:0000466!1.29e-15!126;UBERON:0003104!2.82e-14!238;UBERON:0009142!2.82e-14!238;UBERON:0001041!8.05e-14!98;UBERON:0005177!1.07e-13!107;UBERON:0000464!3.12e-12!104;UBERON:0005911!8.52e-12!82;UBERON:0000481!2.51e-11!347;UBERON:0005172!6.91e-11!55;UBERON:0005173!6.91e-11!55;UBERON:0006554!1.90e-10!44;UBERON:0008947!3.37e-10!38;UBERON:0003258!3.37e-10!38;UBERON:0009569!3.70e-10!113;UBERON:0001008!5.61e-10!45;UBERON:0000065!2.61e-09!53;UBERON:0000058!2.67e-09!26;UBERON:0002113!5.25e-09!27;UBERON:0003918!5.25e-09!27;UBERON:0005095!5.25e-09!27;UBERON:0007687!5.25e-09!27;UBERON:0005631!7.55e-09!14;UBERON:0000158!7.55e-09!14;UBERON:0002417!1.28e-08!61;UBERON:0000916!1.28e-08!61;UBERON:0002553!2.32e-08!70;UBERON:0000072!2.78e-08!46;UBERON:0000478!5.33e-08!24;UBERON:0003886!7.27e-08!63;UBERON:0001737!7.33e-08!9;UBERON:0000489!9.00e-08!32;UBERON:0001004!1.27e-07!72;UBERON:0003103!2.85e-07!69;UBERON:0003124!2.86e-07!7;UBERON:0003929!4.20e-07!54;UBERON:0000080!4.80e-07!18;UBERON:0002120!4.80e-07!18;UBERON:0004875!4.80e-07!18;UBERON:0005721!4.80e-07!18;UBERON:0005754!4.80e-07!18;UBERON:0007297!4.80e-07!18;UBERON:0009773!5.68e-07!12;UBERON:0001231!5.68e-07!12;UBERON:0004810!5.68e-07!12;UBERON:0005156!6.75e-07!59;UBERON:0000990!6.75e-07!59;UBERON:0006555!9.09e-07!17;UBERON:0005103!9.09e-07!17;UBERON:0000083!9.09e-07!17;UBERON:0009201!9.09e-07!17;UBERON:0004819!9.09e-07!17;UBERON:0006553!9.09e-07!17;UBERON:0003074!9.09e-07!17;UBERON:0003060!9.09e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.18e-13;24!UBERON:0001737;1.33e-11;9!UBERON:0001557;1.33e-11;9!UBERON:0005631;2.69e-09;10!UBERON:0000158;2.69e-09;10!UBERON:0004211;1.49e-08;10!UBERON:0009773;1.49e-08;10!UBERON:0001231;1.49e-08;10!UBERON:0004810;1.49e-08;10!UBERON:0000072;5.22e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.18e-13;24!UBERON:0001737;1.33e-11;9!UBERON:0001557;1.33e-11;9!UBERON:0005631;2.69e-09;10!UBERON:0000158;2.69e-09;10!UBERON:0004211;1.49e-08;10!UBERON:0009773;1.49e-08;10!UBERON:0001231;1.49e-08;10!UBERON:0004810;1.49e-08;10!UBERON:0000072;5.22e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.68e-14,14;UBERON:0000158,5.68e-14,14;UBERON:0000478,8.78e-14,24;UBERON:0004921,4.37e-12,118;UBERON:0001737,1.16e-11,9;UBERON:0004119,4.09e-11,160;UBERON:0000925,4.09e-11,160;UBERON:0006595,4.09e-11,160;UBERON:0003124,1.02e-10,7;UBERON:0001041,1.46e-10,87;UBERON:0001007,1.97e-09,145;UBERON:0001555,1.97e-09,145;UBERON:0007026,1.97e-09,145;UBERON:0004810,1.41e-08,10;UBERON:0008947,1.46e-08,38;UBERON:0003258,1.46e-08,38;UBERON:0006554,3.87e-08,47;UBERON:0005177,4.08e-08,101;UBERON:0001008,7.49e-08,48;UBERON:0001048,2.25e-07,160;UBERON:0005172,2.97e-07,54;UBERON:0005173,2.97e-07,54;UBERON:0000072,7.08e-07,47;UBERON:0009569,8.65e-07,112;UBERON:0004211,9.88e-07,15;UBERON:0009773,9.88e-07,15;UBERON:0001231,9.88e-07,15;UBERON:0001285,9.88e-07,15;UBERON:0007684,9.88e-07,15;UBERON:0004208,9.88e-07,15 | |||
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| ||
|short_description=p5@KRT8 | |short_description=p5@KRT8 | ||
}} | }} |
Revision as of 05:08, 18 November 2012
Short description: | p5@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KRT8_5end |
Coexpression cluster: | C819_Alveolar_MCF7_mesothelioma_endometrioid_signet_Renal_gastric |
Association with transcript: | 227bp_to_ENST00000550170_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.38e-34 | 253 |
mesothelial cell | 7.33e-17 | 19 |
extraembryonic cell | 1.43e-14 | 19 |
endodermal cell | 1.56e-09 | 58 |
kidney tubule cell | 1.41e-08 | 10 |
nephron tubule epithelial cell | 1.41e-08 | 10 |
epithelial cell of nephron | 9.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.68e-14 | 14 |
membranous layer | 5.68e-14 | 14 |
extraembryonic structure | 8.78e-14 | 24 |
subdivision of digestive tract | 4.37e-12 | 118 |
larynx | 1.16e-11 | 9 |
endoderm-derived structure | 4.09e-11 | 160 |
endoderm | 4.09e-11 | 160 |
presumptive endoderm | 4.09e-11 | 160 |
chorion | 1.02e-10 | 7 |
foregut | 1.46e-10 | 87 |
digestive system | 1.97e-09 | 145 |
digestive tract | 1.97e-09 | 145 |
primitive gut | 1.97e-09 | 145 |
nephron tubule epithelium | 1.41e-08 | 10 |
respiratory primordium | 1.46e-08 | 38 |
endoderm of foregut | 1.46e-08 | 38 |
urinary system structure | 3.87e-08 | 47 |
trunk region element | 4.08e-08 | 101 |
renal system | 7.49e-08 | 48 |
primordium | 2.25e-07 | 160 |
abdomen element | 2.97e-07 | 54 |
abdominal segment element | 2.97e-07 | 54 |
segment of respiratory tract | 7.08e-07 | 47 |
subdivision of trunk | 8.65e-07 | 112 |
nephron epithelium | 9.88e-07 | 15 |
renal tubule | 9.88e-07 | 15 |
nephron tubule | 9.88e-07 | 15 |
nephron | 9.88e-07 | 15 |
uriniferous tubule | 9.88e-07 | 15 |
nephrogenic mesenchyme | 9.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.43e-21 | 106 |
cell type cancer | 2.12e-16 | 143 |
adenocarcinoma | 4.52e-11 | 25 |
cancer | 8.11e-11 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.