FFCP PHASE1:Hg19::chr17:60757813..60757817,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.02e-33!180;CL:0000680!5.15e-17!57;CL:0000056!5.15e-17!57;CL:0000355!5.15e-17!57;CL:0000183!1.65e-16!59;CL:0000393!4.24e-16!60;CL:0000211!4.24e-16!60;CL:0000187!6.49e-16!54;CL:0000192!1.68e-14!42;CL:0000514!1.68e-14!42;CL:0000057!1.84e-11!75;CL:0000359!7.54e-10!32;CL:0000222!7.90e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.02e-33!180;CL:0000680!5.15e-17!57;CL:0000056!5.15e-17!57;CL:0000355!5.15e-17!57;CL:0000183!1.65e-16!59;CL:0000393!4.24e-16!60;CL:0000211!4.24e-16!60;CL:0000187!6.49e-16!54;CL:0000192!1.68e-14!42;CL:0000514!1.68e-14!42;CL:0000057!1.84e-11!75;CL:0000359!7.54e-10!32;CL:0000222!7.90e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.03e-12;43!CL:0000359;9.73e-10;32!CL:0000153;7.78e-09;9!CL:0000447;7.78e-09;9!CL:0000187;9.13e-09;55!CL:0002595;4.21e-08;5!CL:0000393;9.10e-08;61!CL:0000211;9.10e-08;61!CL:0002620;2.89e-07;23 | |ontology_enrichment_celltype_v019=CL:0000192;1.03e-12;43!CL:0000359;9.73e-10;32!CL:0000153;7.78e-09;9!CL:0000447;7.78e-09;9!CL:0000187;9.13e-09;55!CL:0002595;4.21e-08;5!CL:0000393;9.10e-08;61!CL:0000211;9.10e-08;61!CL:0002620;2.89e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.35e-16,43;CL:0000514,2.35e-16,43;CL:0000187,5.51e-15,55;CL:0000393,2.49e-14,61;CL:0000211,2.49e-14,61;CL:0000680,6.47e-14,58;CL:0000056,6.47e-14,58;CL:0000355,6.47e-14,58;CL:0000359,2.86e-10,32;CL:0000153,1.22e-08,9;CL:0000447,1.22e-08,9;CL:0002595,3.17e-08,5;CL:0000222,4.96e-08,121;CL:0000723,1.74e-07,433;CL:0000048,2.70e-07,427;CL:0002620,4.12e-07,23;CL:0000034,4.30e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.03e-12;43!CL:0000355;2.59e-08;58 | |ontology_enrichment_development_v019=CL:0000514;1.03e-12;43!CL:0000355;2.59e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-16!83;UBERON:0002329!1.36e-16!83;UBERON:0003077!1.36e-16!83;UBERON:0003059!1.36e-16!83;UBERON:0007282!1.36e-16!83;UBERON:0009618!1.36e-16!83;UBERON:0007285!1.36e-16!83;UBERON:0004290!4.91e-15!70;UBERON:0002385!6.33e-15!63;UBERON:0001015!6.33e-15!63;UBERON:0000383!6.33e-15!63;UBERON:0001134!1.21e-14!61;UBERON:0002036!1.21e-14!61;UBERON:0003082!1.21e-14!61;UBERON:0005256!6.54e-14!143;UBERON:0000486!1.18e-13!82;UBERON:0000475!3.95e-09!365;UBERON:0000481!5.96e-09!347;UBERON:0003104!1.34e-08!238;UBERON:0009142!1.34e-08!238;UBERON:0001637!4.20e-08!42;UBERON:0003509!4.20e-08!42;UBERON:0004572!4.20e-08!42;UBERON:0004573!5.58e-08!33;UBERON:0004571!5.58e-08!33;UBERON:0002100!6.09e-08!216;UBERON:0003102!1.37e-07!95;UBERON:0000490!1.85e-07!138;UBERON:0001981!2.84e-07!60;UBERON:0007500!2.84e-07!60;UBERON:0004537!2.84e-07!60;UBERON:0006965!2.84e-07!60;UBERON:0004872!3.92e-07!84;UBERON:0002049!7.04e-07!79;UBERON:0007798!7.04e-07!79 | |ontology_enrichment_uberon=UBERON:0000914!1.36e-16!83;UBERON:0002329!1.36e-16!83;UBERON:0003077!1.36e-16!83;UBERON:0003059!1.36e-16!83;UBERON:0007282!1.36e-16!83;UBERON:0009618!1.36e-16!83;UBERON:0007285!1.36e-16!83;UBERON:0004290!4.91e-15!70;UBERON:0002385!6.33e-15!63;UBERON:0001015!6.33e-15!63;UBERON:0000383!6.33e-15!63;UBERON:0001134!1.21e-14!61;UBERON:0002036!1.21e-14!61;UBERON:0003082!1.21e-14!61;UBERON:0005256!6.54e-14!143;UBERON:0000486!1.18e-13!82;UBERON:0000475!3.95e-09!365;UBERON:0000481!5.96e-09!347;UBERON:0003104!1.34e-08!238;UBERON:0009142!1.34e-08!238;UBERON:0001637!4.20e-08!42;UBERON:0003509!4.20e-08!42;UBERON:0004572!4.20e-08!42;UBERON:0004573!5.58e-08!33;UBERON:0004571!5.58e-08!33;UBERON:0002100!6.09e-08!216;UBERON:0003102!1.37e-07!95;UBERON:0000490!1.85e-07!138;UBERON:0001981!2.84e-07!60;UBERON:0007500!2.84e-07!60;UBERON:0004537!2.84e-07!60;UBERON:0006965!2.84e-07!60;UBERON:0004872!3.92e-07!84;UBERON:0002049!7.04e-07!79;UBERON:0007798!7.04e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.53e-11;33!UBERON:0004571;1.53e-11;33!UBERON:0001637;5.08e-09;42!UBERON:0003509;5.08e-09;42!UBERON:0004572;5.08e-09;42!UBERON:0003513;1.51e-08;7!UBERON:0003834;4.21e-08;5!UBERON:0001533;4.21e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.53e-11;33!UBERON:0004571;1.53e-11;33!UBERON:0001637;5.08e-09;42!UBERON:0003509;5.08e-09;42!UBERON:0004572;5.08e-09;42!UBERON:0003513;1.51e-08;7!UBERON:0003834;4.21e-08;5!UBERON:0001533;4.21e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.58e-13,33;UBERON:0004571,1.58e-13,33;UBERON:0002329,9.43e-13,71;UBERON:0003059,9.43e-13,71;UBERON:0007282,9.43e-13,71;UBERON:0004290,9.43e-13,71;UBERON:0009618,9.43e-13,71;UBERON:0001134,1.18e-12,62;UBERON:0002036,1.18e-12,62;UBERON:0003082,1.18e-12,62;UBERON:0003077,1.72e-12,72;UBERON:0007285,1.72e-12,72;UBERON:0000486,2.52e-12,83;UBERON:0007524,3.09e-12,73;UBERON:0002385,4.38e-12,64;UBERON:0001015,4.38e-12,64;UBERON:0000383,4.38e-12,64;UBERON:0001637,2.28e-11,42;UBERON:0003509,2.28e-11,42;UBERON:0004572,2.28e-11,42;UBERON:0005256,2.75e-11,122;UBERON:0007503,4.56e-11,78;UBERON:0003513,1.10e-08,7;UBERON:0003104,2.83e-08,160;UBERON:0009142,2.83e-08,160;UBERON:0003834,3.17e-08,5;UBERON:0001533,3.17e-08,5;UBERON:0007500,5.12e-08,59;UBERON:0001981,5.12e-08,59;UBERON:0004537,5.12e-08,59;UBERON:0006965,5.12e-08,59;UBERON:0000490,2.71e-07,148 | |||
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| ||
|short_description=p4@MRC2 | |short_description=p4@MRC2 | ||
}} | }} |
Revision as of 03:37, 18 November 2012
Short description: | p4@MRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MRC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -174bp_to_uc002jae.2_5end |
EntrezGene: | MRC2 |
HGNC: | 16875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.35e-16 | 43 |
smooth muscle myoblast | 2.35e-16 | 43 |
muscle cell | 5.51e-15 | 55 |
electrically responsive cell | 2.49e-14 | 61 |
electrically active cell | 2.49e-14 | 61 |
muscle precursor cell | 6.47e-14 | 58 |
myoblast | 6.47e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.47e-14 | 58 |
vascular associated smooth muscle cell | 2.86e-10 | 32 |
GAG secreting cell | 1.22e-08 | 9 |
carbohydrate secreting cell | 1.22e-08 | 9 |
smooth muscle cell of the subclavian artery | 3.17e-08 | 5 |
mesodermal cell | 4.96e-08 | 121 |
somatic stem cell | 1.74e-07 | 433 |
multi fate stem cell | 2.70e-07 | 427 |
skin fibroblast | 4.12e-07 | 23 |
stem cell | 4.30e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 1.58e-13 | 33 |
systemic arterial system | 1.58e-13 | 33 |
somite | 9.43e-13 | 71 |
presomitic mesoderm | 9.43e-13 | 71 |
presumptive segmental plate | 9.43e-13 | 71 |
dermomyotome | 9.43e-13 | 71 |
trunk paraxial mesoderm | 9.43e-13 | 71 |
skeletal muscle tissue | 1.18e-12 | 62 |
striated muscle tissue | 1.18e-12 | 62 |
myotome | 1.18e-12 | 62 |
paraxial mesoderm | 1.72e-12 | 72 |
presumptive paraxial mesoderm | 1.72e-12 | 72 |
multilaminar epithelium | 2.52e-12 | 83 |
dense mesenchyme tissue | 3.09e-12 | 73 |
muscle tissue | 4.38e-12 | 64 |
musculature | 4.38e-12 | 64 |
musculature of body | 4.38e-12 | 64 |
artery | 2.28e-11 | 42 |
arterial blood vessel | 2.28e-11 | 42 |
arterial system | 2.28e-11 | 42 |
trunk mesenchyme | 2.75e-11 | 122 |
epithelial vesicle | 4.56e-11 | 78 |
trunk blood vessel | 1.10e-08 | 7 |
mesenchyme | 2.83e-08 | 160 |
entire embryonic mesenchyme | 2.83e-08 | 160 |
thoracic segment blood vessel | 3.17e-08 | 5 |
subclavian artery | 3.17e-08 | 5 |
epithelial tube open at both ends | 5.12e-08 | 59 |
blood vessel | 5.12e-08 | 59 |
blood vasculature | 5.12e-08 | 59 |
vascular cord | 5.12e-08 | 59 |
unilaminar epithelium | 2.71e-07 | 148 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.