FFCP PHASE1:Hg19::chr10:118031730..118031758,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.31e-07;17!CL:0002518;5.31e-07;17 | |ontology_enrichment_celltype_v019=CL:1000497;5.31e-07;17!CL:0002518;5.31e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.44e-07,17;CL:0002518,6.44e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-23!115;UBERON:0000475!5.07e-19!365;UBERON:0003075!2.64e-16!86;UBERON:0007284!2.64e-16!86;UBERON:0001049!2.75e-15!57;UBERON:0005068!2.75e-15!57;UBERON:0006241!2.75e-15!57;UBERON:0007135!2.75e-15!57;UBERON:0005743!8.03e-15!86;UBERON:0002346!1.75e-14!90;UBERON:0002616!1.97e-14!59;UBERON:0000955!2.82e-14!69;UBERON:0006238!2.82e-14!69;UBERON:0003056!2.91e-14!61;UBERON:0000153!4.90e-14!129;UBERON:0007811!4.90e-14!129;UBERON:0001017!5.34e-14!82;UBERON:0000481!6.24e-14!347;UBERON:0000033!1.69e-13!123;UBERON:0000073!7.84e-13!94;UBERON:0001016!7.84e-13!94;UBERON:0003080!1.18e-12!42;UBERON:0002780!4.79e-12!41;UBERON:0001890!4.79e-12!41;UBERON:0006240!4.79e-12!41;UBERON:0002020!9.34e-11!34;UBERON:0003528!9.34e-11!34;UBERON:0001893!1.09e-10!34;UBERON:0000468!1.53e-10!659;UBERON:0002791!1.78e-10!33;UBERON:0001869!2.39e-10!32;UBERON:0004121!2.87e-10!169;UBERON:0000483!6.32e-10!309;UBERON:0000119!7.68e-10!312;UBERON:0000924!2.24e-09!173;UBERON:0006601!2.24e-09!173;UBERON:0000477!6.63e-09!286;UBERON:0000956!8.50e-08!25;UBERON:0000203!8.50e-08!25;UBERON:0004111!2.76e-07!241;UBERON:0000062!8.32e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!2.13e-23!115;UBERON:0000475!5.07e-19!365;UBERON:0003075!2.64e-16!86;UBERON:0007284!2.64e-16!86;UBERON:0001049!2.75e-15!57;UBERON:0005068!2.75e-15!57;UBERON:0006241!2.75e-15!57;UBERON:0007135!2.75e-15!57;UBERON:0005743!8.03e-15!86;UBERON:0002346!1.75e-14!90;UBERON:0002616!1.97e-14!59;UBERON:0000955!2.82e-14!69;UBERON:0006238!2.82e-14!69;UBERON:0003056!2.91e-14!61;UBERON:0000153!4.90e-14!129;UBERON:0007811!4.90e-14!129;UBERON:0001017!5.34e-14!82;UBERON:0000481!6.24e-14!347;UBERON:0000033!1.69e-13!123;UBERON:0000073!7.84e-13!94;UBERON:0001016!7.84e-13!94;UBERON:0003080!1.18e-12!42;UBERON:0002780!4.79e-12!41;UBERON:0001890!4.79e-12!41;UBERON:0006240!4.79e-12!41;UBERON:0002020!9.34e-11!34;UBERON:0003528!9.34e-11!34;UBERON:0001893!1.09e-10!34;UBERON:0000468!1.53e-10!659;UBERON:0002791!1.78e-10!33;UBERON:0001869!2.39e-10!32;UBERON:0004121!2.87e-10!169;UBERON:0000483!6.32e-10!309;UBERON:0000119!7.68e-10!312;UBERON:0000924!2.24e-09!173;UBERON:0006601!2.24e-09!173;UBERON:0000477!6.63e-09!286;UBERON:0000956!8.50e-08!25;UBERON:0000203!8.50e-08!25;UBERON:0004111!2.76e-07!241;UBERON:0000062!8.32e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.49e-08;34!UBERON:0002791;2.60e-08;32!UBERON:0003528;2.84e-08;34!UBERON:0002020;2.84e-08;34!UBERON:0001869;3.08e-08;32!UBERON:0002780;4.80e-07;41!UBERON:0001890;4.80e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001893;1.49e-08;34!UBERON:0002791;2.60e-08;32!UBERON:0003528;2.84e-08;34!UBERON:0002020;2.84e-08;34!UBERON:0001869;3.08e-08;32!UBERON:0002780;4.80e-07;41!UBERON:0001890;4.80e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.53e-22,114;UBERON:0003075,7.45e-14,82;UBERON:0007284,7.45e-14,82;UBERON:0002346,2.00e-12,86;UBERON:0003056,1.83e-11,61;UBERON:0001049,8.11e-11,56;UBERON:0005068,8.11e-11,56;UBERON:0006241,8.11e-11,56;UBERON:0007135,8.11e-11,56;UBERON:0010371,3.10e-10,104;UBERON:0000955,5.02e-10,68;UBERON:0006238,5.02e-10,68;UBERON:0001017,9.87e-10,81;UBERON:0000073,1.12e-09,53;UBERON:0002616,1.12e-09,53;UBERON:0003528,2.00e-09,34;UBERON:0002020,2.00e-09,34;UBERON:0002780,2.31e-09,41;UBERON:0001890,2.31e-09,41;UBERON:0003080,2.31e-09,41;UBERON:0006240,2.31e-09,41;UBERON:0001893,2.35e-09,34;UBERON:0011216,5.42e-09,223;UBERON:0002791,6.08e-09,32;UBERON:0001869,6.30e-09,32;UBERON:0010314,8.16e-09,132;UBERON:0001016,1.05e-08,89;UBERON:0004121,2.82e-08,171;UBERON:0000924,2.82e-08,171;UBERON:0006601,2.82e-08,171;UBERON:0000483,9.74e-08,306;UBERON:0000119,2.17e-07,309;UBERON:0000489,3.77e-07,31 | |||
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| ||
|short_description=p1@GFRA1 | |short_description=p1@GFRA1 | ||
}} | }} |
Revision as of 00:12, 18 November 2012
Short description: | p1@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GFRA1_5end |
Coexpression cluster: | C1565_MCF7_normal_mesothelioma_Smooth_breast_thyroid_bone |
Association with transcript: | 35bp_to_ENST00000369236_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.44e-07 | 17 |
kidney epithelial cell | 6.44e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.53e-22 | 114 |
neural plate | 7.45e-14 | 82 |
presumptive neural plate | 7.45e-14 | 82 |
neurectoderm | 2.00e-12 | 86 |
pre-chordal neural plate | 1.83e-11 | 61 |
neural tube | 8.11e-11 | 56 |
neural rod | 8.11e-11 | 56 |
future spinal cord | 8.11e-11 | 56 |
neural keel | 8.11e-11 | 56 |
ecto-epithelium | 3.10e-10 | 104 |
brain | 5.02e-10 | 68 |
future brain | 5.02e-10 | 68 |
central nervous system | 9.87e-10 | 81 |
regional part of nervous system | 1.12e-09 | 53 |
regional part of brain | 1.12e-09 | 53 |
brain grey matter | 2.00e-09 | 34 |
gray matter | 2.00e-09 | 34 |
regional part of forebrain | 2.31e-09 | 41 |
forebrain | 2.31e-09 | 41 |
anterior neural tube | 2.31e-09 | 41 |
future forebrain | 2.31e-09 | 41 |
telencephalon | 2.35e-09 | 34 |
organ system subdivision | 5.42e-09 | 223 |
regional part of telencephalon | 6.08e-09 | 32 |
cerebral hemisphere | 6.30e-09 | 32 |
structure with developmental contribution from neural crest | 8.16e-09 | 132 |
nervous system | 1.05e-08 | 89 |
ectoderm-derived structure | 2.82e-08 | 171 |
ectoderm | 2.82e-08 | 171 |
presumptive ectoderm | 2.82e-08 | 171 |
epithelium | 9.74e-08 | 306 |
cell layer | 2.17e-07 | 309 |
cavitated compound organ | 3.77e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.