FFCP PHASE1:Hg19::chr4:55096175..55096225,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.36e-26!180;CL:0000057!1.88e-20!75;CL:0002620!1.08e-09!23;CL:0000680!7.87e-09!57;CL:0000056!7.87e-09!57;CL:0000355!7.87e-09!57;CL:0000187!2.32e-08!54;CL:0002334!1.50e-07!12;CL:0000192!1.62e-07!42;CL:0000514!1.62e-07!42;CL:0000183!2.14e-07!59 | |ontology_enrichment_celltype=CL:0000055!3.36e-26!180;CL:0000057!1.88e-20!75;CL:0002620!1.08e-09!23;CL:0000680!7.87e-09!57;CL:0000056!7.87e-09!57;CL:0000355!7.87e-09!57;CL:0000187!2.32e-08!54;CL:0002334!1.50e-07!12;CL:0000192!1.62e-07!42;CL:0000514!1.62e-07!42;CL:0000183!2.14e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.23e-11;23!CL:1000306;3.33e-08;4!CL:0002547;3.33e-08;4!CL:0002334;9.25e-08;12!CL:0002615;1.65e-07;3!CL:0002579;2.14e-07;3!CL:0002580;3.30e-07;3!CL:0000136;5.37e-07;13!CL:0000057;5.80e-07;73!CL:0000135;7.52e-07;3!CL:0000388;7.52e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;7.23e-11;23!CL:1000306;3.33e-08;4!CL:0002547;3.33e-08;4!CL:0002334;9.25e-08;12!CL:0002615;1.65e-07;3!CL:0002579;2.14e-07;3!CL:0002580;3.30e-07;3!CL:0000136;5.37e-07;13!CL:0000057;5.80e-07;73!CL:0000135;7.52e-07;3!CL:0000388;7.52e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.18e-20,76;CL:0000048,1.06e-11,427;CL:0000723,2.98e-11,433;CL:0000034,1.13e-10,441;CL:0002620,1.23e-10,23;CL:0000136,1.61e-09,15;CL:0002320,7.10e-09,361;CL:1000306,1.94e-08,4;CL:0002547,1.94e-08,4;CL:0002334,9.18e-08,12;CL:0002615,2.07e-07,3;CL:0002579,2.16e-07,3;CL:0000134,2.64e-07,354;CL:0002580,3.68e-07,3;CL:0000135,9.78e-07,3;CL:0000388,9.78e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.54e-11!365;UBERON:0000914!1.23e-09!83;UBERON:0002329!1.23e-09!83;UBERON:0003077!1.23e-09!83;UBERON:0003059!1.23e-09!83;UBERON:0007282!1.23e-09!83;UBERON:0009618!1.23e-09!83;UBERON:0007285!1.23e-09!83;UBERON:0003102!7.63e-09!95;UBERON:0004457!1.31e-07!12;UBERON:0000042!1.31e-07!12;UBERON:0001134!1.44e-07!61;UBERON:0002036!1.44e-07!61;UBERON:0003082!1.44e-07!61;UBERON:0002385!1.89e-07!63;UBERON:0001015!1.89e-07!63;UBERON:0000383!1.89e-07!63;UBERON:0004290!2.80e-07!70;UBERON:0003688!2.98e-07!6;UBERON:0002358!2.98e-07!6;UBERON:0003684!2.98e-07!6;UBERON:0001178!2.98e-07!6 | |ontology_enrichment_uberon=UBERON:0000475!2.54e-11!365;UBERON:0000914!1.23e-09!83;UBERON:0002329!1.23e-09!83;UBERON:0003077!1.23e-09!83;UBERON:0003059!1.23e-09!83;UBERON:0007282!1.23e-09!83;UBERON:0009618!1.23e-09!83;UBERON:0007285!1.23e-09!83;UBERON:0003102!7.63e-09!95;UBERON:0004457!1.31e-07!12;UBERON:0000042!1.31e-07!12;UBERON:0001134!1.44e-07!61;UBERON:0002036!1.44e-07!61;UBERON:0003082!1.44e-07!61;UBERON:0002385!1.89e-07!63;UBERON:0001015!1.89e-07!63;UBERON:0000383!1.89e-07!63;UBERON:0004290!2.80e-07!70;UBERON:0003688!2.98e-07!6;UBERON:0002358!2.98e-07!6;UBERON:0003684!2.98e-07!6;UBERON:0001178!2.98e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.04e-13;6!UBERON:0002358;3.04e-13;6!UBERON:0003684;3.04e-13;6!UBERON:0001178;3.04e-13;6!UBERON:0004457;1.76e-08;9!UBERON:0000042;1.76e-08;9!UBERON:0004797;3.33e-08;4!UBERON:0000415;3.33e-08;4!UBERON:0007240;3.33e-08;4!UBERON:0005742;3.33e-08;4!UBERON:0005734;3.33e-08;4!UBERON:0004664;3.33e-08;4!UBERON:0004663;3.33e-08;4!UBERON:0002384;3.69e-07;198!UBERON:0007846;7.52e-07;3!UBERON:0000043;7.52e-07;3!UBERON:0007845;7.52e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.04e-13;6!UBERON:0002358;3.04e-13;6!UBERON:0003684;3.04e-13;6!UBERON:0001178;3.04e-13;6!UBERON:0004457;1.76e-08;9!UBERON:0000042;1.76e-08;9!UBERON:0004797;3.33e-08;4!UBERON:0000415;3.33e-08;4!UBERON:0007240;3.33e-08;4!UBERON:0005742;3.33e-08;4!UBERON:0005734;3.33e-08;4!UBERON:0004664;3.33e-08;4!UBERON:0004663;3.33e-08;4!UBERON:0002384;3.69e-07;198!UBERON:0007846;7.52e-07;3!UBERON:0000043;7.52e-07;3!UBERON:0007845;7.52e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.83e-13,6;UBERON:0002358,3.83e-13,6;UBERON:0003684,3.83e-13,6;UBERON:0001178,3.83e-13,6;UBERON:0002384,1.07e-08,371;UBERON:0000415,1.94e-08,4;UBERON:0007240,1.94e-08,4;UBERON:0005742,1.94e-08,4;UBERON:0005734,1.94e-08,4;UBERON:0004664,1.94e-08,4;UBERON:0004663,1.94e-08,4;UBERON:0003102,2.99e-07,99;UBERON:0007846,9.78e-07,3;UBERON:0000043,9.78e-07,3;UBERON:0007845,9.78e-07,3 | |||
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| ||
|short_description=p8@PDGFRA | |short_description=p8@PDGFRA | ||
}} | }} |
Revision as of 17:45, 17 November 2012
Short description: | p8@PDGFRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PDGFRA_5end |
Coexpression cluster: | NA |
Association with transcript: | -263bp_to_ENST00000504461_5end |
EntrezGene: | PDGFRA |
HGNC: | 8803 |
UniProt: | D6RG11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.18e-20 | 76 |
multi fate stem cell | 1.06e-11 | 427 |
somatic stem cell | 2.98e-11 | 433 |
stem cell | 1.13e-10 | 441 |
skin fibroblast | 1.23e-10 | 23 |
fat cell | 1.61e-09 | 15 |
connective tissue cell | 7.10e-09 | 361 |
fibroblast of tunica adventitia of artery | 1.94e-08 | 4 |
fibroblast of the aortic adventitia | 1.94e-08 | 4 |
preadipocyte | 9.18e-08 | 12 |
adipocyte of omentum tissue | 2.07e-07 | 3 |
omentum preadipocyte | 2.16e-07 | 3 |
mesenchymal cell | 2.64e-07 | 354 |
preadipocyte of the breast | 3.68e-07 | 3 |
fibrocyte | 9.78e-07 | 3 |
tendon cell | 9.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.83e-13 | 6 |
peritoneum | 3.83e-13 | 6 |
abdominal cavity | 3.83e-13 | 6 |
visceral peritoneum | 3.83e-13 | 6 |
connective tissue | 1.07e-08 | 371 |
artery wall | 1.94e-08 | 4 |
tunica adventitia of artery | 1.94e-08 | 4 |
adventitia | 1.94e-08 | 4 |
tunica adventitia of blood vessel | 1.94e-08 | 4 |
aorta tunica adventitia | 1.94e-08 | 4 |
aorta wall | 1.94e-08 | 4 |
surface structure | 2.99e-07 | 99 |
dense regular connective tissue | 9.78e-07 | 3 |
tendon | 9.78e-07 | 3 |
regular connective tissue | 9.78e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.