FFCP PHASE1:Hg19::chr16:30709448..30709525,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!9.81e-27!140;CL:0002031!1.84e-22!124;CL:0000037!4.48e-22!172;CL:0000566!4.48e-22!172;CL:0002057!9.92e-22!42;CL:0000988!1.06e-21!182;CL:0002087!1.08e-21!119;CL:0000860!2.59e-21!45;CL:0000766!3.12e-21!76;CL:0002032!2.03e-20!165;CL:0000837!2.03e-20!165;CL:0000557!2.44e-18!71;CL:0002009!1.77e-17!65;CL:0000839!5.30e-17!70;CL:0002194!1.07e-16!63;CL:0000576!1.07e-16!63;CL:0000040!1.07e-16!63;CL:0000559!1.07e-16!63;CL:0000763!7.51e-15!112;CL:0000049!7.51e-15!112 | |ontology_enrichment_celltype=CL:0000738!9.81e-27!140;CL:0002031!1.84e-22!124;CL:0000037!4.48e-22!172;CL:0000566!4.48e-22!172;CL:0002057!9.92e-22!42;CL:0000988!1.06e-21!182;CL:0002087!1.08e-21!119;CL:0000860!2.59e-21!45;CL:0000766!3.12e-21!76;CL:0002032!2.03e-20!165;CL:0000837!2.03e-20!165;CL:0000557!2.44e-18!71;CL:0002009!1.77e-17!65;CL:0000839!5.30e-17!70;CL:0002194!1.07e-16!63;CL:0000576!1.07e-16!63;CL:0000040!1.07e-16!63;CL:0000559!1.07e-16!63;CL:0000763!7.51e-15!112;CL:0000049!7.51e-15!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-18;33!CL:0002057;2.51e-18;33!CL:0000576;6.74e-14;48!CL:0000473;2.95e-13;39!CL:0000234;2.95e-13;39!CL:0000766;1.57e-10;69!CL:0002087;3.98e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;2.51e-18;33!CL:0002057;2.51e-18;33!CL:0000576;6.74e-14;48!CL:0000473;2.95e-13;39!CL:0000234;2.95e-13;39!CL:0000766;1.57e-10;69!CL:0002087;3.98e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.32e-27,136;CL:0002031,4.57e-23,120;CL:0000037,1.81e-22,168;CL:0002087,2.64e-22,115;CL:0000766,3.09e-22,72;CL:0000988,4.49e-22,177;CL:0000860,9.92e-22,42;CL:0002057,9.92e-22,42;CL:0002032,8.36e-21,161;CL:0000837,8.36e-21,161;CL:0000473,2.64e-19,48;CL:0000234,2.64e-19,48;CL:0000557,2.88e-19,67;CL:0002009,1.89e-18,61;CL:0000839,7.18e-18,66;CL:0002194,1.18e-17,59;CL:0000576,1.18e-17,59;CL:0000040,1.18e-17,59;CL:0000559,1.18e-17,59;CL:0000763,2.72e-15,108;CL:0000049,2.72e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-16;42 | |ontology_enrichment_development_v019=CL:0002057;5.52e-16;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.73e-21!112;UBERON:0002390!5.14e-21!102;UBERON:0003061!5.14e-21!102;UBERON:0002371!4.07e-17!80;UBERON:0002405!3.58e-16!115;UBERON:0001474!1.07e-14!86;UBERON:0003081!1.38e-12!216;UBERON:0007023!1.99e-12!115;UBERON:0004765!7.59e-10!101;UBERON:0001434!7.59e-10!101 | |ontology_enrichment_uberon=UBERON:0002193!1.73e-21!112;UBERON:0002390!5.14e-21!102;UBERON:0003061!5.14e-21!102;UBERON:0002371!4.07e-17!80;UBERON:0002405!3.58e-16!115;UBERON:0001474!1.07e-14!86;UBERON:0003081!1.38e-12!216;UBERON:0007023!1.99e-12!115;UBERON:0004765!7.59e-10!101;UBERON:0001434!7.59e-10!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.85e-22,108;UBERON:0002390,1.00e-21,98;UBERON:0003061,1.00e-21,98;UBERON:0002405,3.02e-19,93;UBERON:0002371,7.19e-18,76;UBERON:0001474,2.75e-15,82;UBERON:0003081,1.94e-14,203;UBERON:0007023,3.29e-12,114;UBERON:0004765,4.22e-12,90;UBERON:0001434,5.00e-09,100;UBERON:0000073,6.52e-07,53;UBERON:0002616,6.52e-07,53;UBERON:0001049,8.29e-07,56;UBERON:0005068,8.29e-07,56;UBERON:0006241,8.29e-07,56;UBERON:0007135,8.29e-07,56 | |||
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| ||
|short_description=p1@SRCAP | |short_description=p1@SRCAP | ||
}} | }} |
Revision as of 15:48, 17 November 2012
Short description: | p1@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SRCAP_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000411466_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | C9J4U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.32e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 4.57e-23 | 120 |
hematopoietic stem cell | 1.81e-22 | 168 |
nongranular leukocyte | 2.64e-22 | 115 |
myeloid leukocyte | 3.09e-22 | 72 |
hematopoietic cell | 4.49e-22 | 177 |
classical monocyte | 9.92e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-22 | 42 |
hematopoietic oligopotent progenitor cell | 8.36e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-21 | 161 |
defensive cell | 2.64e-19 | 48 |
phagocyte | 2.64e-19 | 48 |
granulocyte monocyte progenitor cell | 2.88e-19 | 67 |
macrophage dendritic cell progenitor | 1.89e-18 | 61 |
myeloid lineage restricted progenitor cell | 7.18e-18 | 66 |
monopoietic cell | 1.18e-17 | 59 |
monocyte | 1.18e-17 | 59 |
monoblast | 1.18e-17 | 59 |
promonocyte | 1.18e-17 | 59 |
myeloid cell | 2.72e-15 | 108 |
common myeloid progenitor | 2.72e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.85e-22 | 108 |
hematopoietic system | 1.00e-21 | 98 |
blood island | 1.00e-21 | 98 |
immune system | 3.02e-19 | 93 |
bone marrow | 7.19e-18 | 76 |
bone element | 2.75e-15 | 82 |
lateral plate mesoderm | 1.94e-14 | 203 |
adult organism | 3.29e-12 | 114 |
skeletal element | 4.22e-12 | 90 |
skeletal system | 5.00e-09 | 100 |
regional part of nervous system | 6.52e-07 | 53 |
regional part of brain | 6.52e-07 | 53 |
neural tube | 8.29e-07 | 56 |
neural rod | 8.29e-07 | 56 |
future spinal cord | 8.29e-07 | 56 |
neural keel | 8.29e-07 | 56 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.