FFCP PHASE1:Hg19::chr1:145715634..145715642,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000625!5.53e-39!11;CL:0000791!2.73e-27!18;CL:0000789!2.73e-27!18;CL:0002420!2.73e-27!18;CL:0002419!2.73e-27!18;CL:0000790!2.73e-27!18;CL:0000084!7.46e-19!25;CL:0000827!7.46e-19!25;CL:0000838!3.51e-14!52;CL:0000542!7.70e-14!53;CL:0000051!7.70e-14!53;CL:0000623!1.20e-11!3;CL:0000825!1.20e-11!3;CL:0000842!3.48e-11!3;CL:0000738!8.37e-11!140;CL:0002087!3.80e-10!119;CL:0000224!1.71e-08!4;CL:0000037!1.11e-07!172;CL:0000566!1.11e-07!172;CL:0000988!6.08e-07!182;CL:0002031!9.86e-07!124 | |ontology_enrichment_celltype=CL:0000625!5.53e-39!11;CL:0000791!2.73e-27!18;CL:0000789!2.73e-27!18;CL:0002420!2.73e-27!18;CL:0002419!2.73e-27!18;CL:0000790!2.73e-27!18;CL:0000084!7.46e-19!25;CL:0000827!7.46e-19!25;CL:0000838!3.51e-14!52;CL:0000542!7.70e-14!53;CL:0000051!7.70e-14!53;CL:0000623!1.20e-11!3;CL:0000825!1.20e-11!3;CL:0000842!3.48e-11!3;CL:0000738!8.37e-11!140;CL:0002087!3.80e-10!119;CL:0000224!1.71e-08!4;CL:0000037!1.11e-07!172;CL:0000566!1.11e-07!172;CL:0000988!6.08e-07!182;CL:0002031!9.86e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.47e-45;11!CL:0000791;7.62e-28;18!CL:0000789;7.62e-28;18!CL:0002419;7.62e-28;18!CL:0000084;4.00e-20;25!CL:0000542;1.17e-09;53!CL:0000322;7.02e-08;3!CL:0000767;7.02e-08;3!CL:0000623;7.02e-08;3 | |ontology_enrichment_celltype_v019=CL:0000625;2.47e-45;11!CL:0000791;7.62e-28;18!CL:0000789;7.62e-28;18!CL:0002419;7.62e-28;18!CL:0000084;4.00e-20;25!CL:0000542;1.17e-09;53!CL:0000322;7.02e-08;3!CL:0000767;7.02e-08;3!CL:0000623;7.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.10e-45,11;CL:0000791,8.77e-28,18;CL:0000789,8.77e-28,18;CL:0002420,8.77e-28,18;CL:0002419,8.77e-28,18;CL:0000790,8.77e-28,18;CL:0000084,4.42e-20,25;CL:0000827,4.42e-20,25;CL:0000838,9.63e-14,52;CL:0000542,1.75e-13,53;CL:0000051,1.75e-13,53;CL:0000738,6.40e-09,136;CL:0002087,3.72e-08,115;CL:0000322,5.93e-08,3;CL:0000623,6.34e-08,3;CL:0000825,6.34e-08,3;CL:0000767,6.78e-08,3;CL:0002031,8.34e-08,120;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,3.85e-07,168;CL:0000988,9.38e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.62e-28;18!CL:0000051;1.17e-09;53 | |ontology_enrichment_development_v019=CL:0000790;7.62e-28;18!CL:0000051;1.17e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;3.52e-11;2 | |ontology_enrichment_disease_v019=DOID:3910;3.52e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.65e-08!7;UBERON:0000178!4.56e-08!15;UBERON:0000179!4.56e-08!15;UBERON:0000463!4.56e-08!15;UBERON:0007023!3.45e-07!115 | |ontology_enrichment_uberon=UBERON:0004177!3.65e-08!7;UBERON:0000178!4.56e-08!15;UBERON:0000179!4.56e-08!15;UBERON:0000463!4.56e-08!15;UBERON:0007023!3.45e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.52e-11;2!UBERON:0002173;3.52e-11;2!UBERON:0002186;3.52e-11;2!UBERON:0004821;7.02e-08;3!UBERON:0007499;7.02e-08;3!UBERON:0003215;7.02e-08;3!UBERON:0010368;7.02e-08;3!UBERON:0009911;7.02e-08;3!UBERON:0002299;7.02e-08;3!UBERON:0006524;7.02e-08;3!UBERON:0008874;7.02e-08;3!UBERON:0002169;7.02e-08;3!UBERON:0004894;7.02e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;3.52e-11;2!UBERON:0002173;3.52e-11;2!UBERON:0002186;3.52e-11;2!UBERON:0004821;7.02e-08;3!UBERON:0007499;7.02e-08;3!UBERON:0003215;7.02e-08;3!UBERON:0010368;7.02e-08;3!UBERON:0009911;7.02e-08;3!UBERON:0002299;7.02e-08;3!UBERON:0006524;7.02e-08;3!UBERON:0008874;7.02e-08;3!UBERON:0002169;7.02e-08;3!UBERON:0004894;7.02e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,1.53531759238885,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0.506039384039006,0.637130828648193,0.651083453856419,5.70271226669025,0.752875595388864,0.255973222308837,2.49861453104692,0.473554504088034,2.46338399076314,2.21767417547206,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.714695326373367,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,0.218559560503957,0,0,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,1.53531759238885,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0.506039384039006,0.637130828648193,0.651083453856419,5.70271226669025,0.752875595388864,0.255973222308837,2.49861453104692,0.473554504088034,2.46338399076314,2.21767417547206,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.714695326373367,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,0.218559560503957,0,0,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p2@CD160 | |short_description=p2@CD160 | ||
}} | }} |
Revision as of 13:12, 17 November 2012
Short description: | p2@CD160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CD160_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -20bp_to_ENST00000369290, ENST00000401557_5end |
EntrezGene: | CD160 |
HGNC: | 17013 |
UniProt: | Q5T2V6O95971 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.10e-45 | 11 |
mature alpha-beta T cell | 8.77e-28 | 18 |
alpha-beta T cell | 8.77e-28 | 18 |
immature T cell | 8.77e-28 | 18 |
mature T cell | 8.77e-28 | 18 |
immature alpha-beta T cell | 8.77e-28 | 18 |
T cell | 4.42e-20 | 25 |
pro-T cell | 4.42e-20 | 25 |
lymphoid lineage restricted progenitor cell | 9.63e-14 | 52 |
lymphocyte | 1.75e-13 | 53 |
common lymphoid progenitor | 1.75e-13 | 53 |
leukocyte | 6.40e-09 | 136 |
nongranular leukocyte | 3.72e-08 | 115 |
pneumocyte | 5.93e-08 | 3 |
natural killer cell | 6.34e-08 | 3 |
pro-NK cell | 6.34e-08 | 3 |
basophil | 6.78e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.34e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-07 | 161 |
hematopoietic stem cell | 3.85e-07 | 168 |
hematopoietic cell | 9.38e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.73e-11 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.