FFCP PHASE1:Hg19::chr2:223289239..223289272,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!7.30e-08!43 | |ontology_enrichment_celltype=CL:0002076!7.30e-08!43 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.67e-38!115;UBERON:0001049!1.39e-18!57;UBERON:0005068!1.39e-18!57;UBERON:0006241!1.39e-18!57;UBERON:0007135!1.39e-18!57;UBERON:0002616!7.69e-15!59;UBERON:0003080!9.38e-15!42;UBERON:0002780!1.42e-14!41;UBERON:0001890!1.42e-14!41;UBERON:0006240!1.42e-14!41;UBERON:0003075!1.04e-13!86;UBERON:0007284!1.04e-13!86;UBERON:0002346!4.07e-12!90;UBERON:0000955!7.04e-12!69;UBERON:0006238!7.04e-12!69;UBERON:0000062!2.26e-11!511;UBERON:0002020!5.04e-11!34;UBERON:0003528!5.04e-11!34;UBERON:0001893!7.36e-11!34;UBERON:0001869!1.34e-10!32;UBERON:0000153!1.58e-10!129;UBERON:0007811!1.58e-10!129;UBERON:0003056!1.95e-10!61;UBERON:0002791!2.33e-10!33;UBERON:0001017!7.15e-10!82;UBERON:0000033!1.91e-09!123;UBERON:0005743!5.25e-09!86;UBERON:0000073!6.15e-09!94;UBERON:0001016!6.15e-09!94;UBERON:0002619!2.08e-08!22;UBERON:0004121!4.38e-08!169;UBERON:0001950!8.99e-08!20;UBERON:0000064!1.00e-07!219;UBERON:0000924!2.47e-07!173;UBERON:0006601!2.47e-07!173;UBERON:0000956!4.72e-07!25;UBERON:0000203!4.72e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!3.67e-38!115;UBERON:0001049!1.39e-18!57;UBERON:0005068!1.39e-18!57;UBERON:0006241!1.39e-18!57;UBERON:0007135!1.39e-18!57;UBERON:0002616!7.69e-15!59;UBERON:0003080!9.38e-15!42;UBERON:0002780!1.42e-14!41;UBERON:0001890!1.42e-14!41;UBERON:0006240!1.42e-14!41;UBERON:0003075!1.04e-13!86;UBERON:0007284!1.04e-13!86;UBERON:0002346!4.07e-12!90;UBERON:0000955!7.04e-12!69;UBERON:0006238!7.04e-12!69;UBERON:0000062!2.26e-11!511;UBERON:0002020!5.04e-11!34;UBERON:0003528!5.04e-11!34;UBERON:0001893!7.36e-11!34;UBERON:0001869!1.34e-10!32;UBERON:0000153!1.58e-10!129;UBERON:0007811!1.58e-10!129;UBERON:0003056!1.95e-10!61;UBERON:0002791!2.33e-10!33;UBERON:0001017!7.15e-10!82;UBERON:0000033!1.91e-09!123;UBERON:0005743!5.25e-09!86;UBERON:0000073!6.15e-09!94;UBERON:0001016!6.15e-09!94;UBERON:0002619!2.08e-08!22;UBERON:0004121!4.38e-08!169;UBERON:0001950!8.99e-08!20;UBERON:0000064!1.00e-07!219;UBERON:0000924!2.47e-07!173;UBERON:0006601!2.47e-07!173;UBERON:0000956!4.72e-07!25;UBERON:0000203!4.72e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.95e-12;41!UBERON:0001890;2.95e-12;41!UBERON:0001869;1.97e-11;32!UBERON:0000073;2.91e-11;53!UBERON:0002616;2.91e-11;53!UBERON:0001893;5.30e-11;34!UBERON:0003528;8.18e-11;34!UBERON:0002020;8.18e-11;34!UBERON:0002791;1.76e-10;32!UBERON:0007023;3.21e-10;114!UBERON:0002619;3.94e-10;22!UBERON:0001950;2.37e-09;20!UBERON:0000956;3.31e-08;25!UBERON:0000203;3.31e-08;25!UBERON:0004921;8.36e-08;33!UBERON:0001041;1.03e-07;14!UBERON:0000955;2.43e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.95e-12;41!UBERON:0001890;2.95e-12;41!UBERON:0001869;1.97e-11;32!UBERON:0000073;2.91e-11;53!UBERON:0002616;2.91e-11;53!UBERON:0001893;5.30e-11;34!UBERON:0003528;8.18e-11;34!UBERON:0002020;8.18e-11;34!UBERON:0002791;1.76e-10;32!UBERON:0007023;3.21e-10;114!UBERON:0002619;3.94e-10;22!UBERON:0001950;2.37e-09;20!UBERON:0000956;3.31e-08;25!UBERON:0000203;3.31e-08;25!UBERON:0004921;8.36e-08;33!UBERON:0001041;1.03e-07;14!UBERON:0000955;2.43e-07;68 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.29e-37,114;UBERON:0000073,6.49e-20,53;UBERON:0002616,6.49e-20,53;UBERON:0001049,8.15e-20,56;UBERON:0005068,8.15e-20,56;UBERON:0006241,8.15e-20,56;UBERON:0007135,8.15e-20,56;UBERON:0002780,1.62e-16,41;UBERON:0001890,1.62e-16,41;UBERON:0003080,1.62e-16,41;UBERON:0006240,1.62e-16,41;UBERON:0000955,3.64e-14,68;UBERON:0006238,3.64e-14,68;UBERON:0003075,9.63e-13,82;UBERON:0007284,9.63e-13,82;UBERON:0001869,1.88e-12,32;UBERON:0010371,2.13e-12,104;UBERON:0003528,2.76e-12,34;UBERON:0002020,2.76e-12,34;UBERON:0011216,3.03e-12,223;UBERON:0001893,4.29e-12,34;UBERON:0001017,1.89e-11,81;UBERON:0002346,2.09e-11,86;UBERON:0002791,3.26e-11,32;UBERON:0001016,8.29e-11,89;UBERON:0003056,2.45e-10,61;UBERON:0002619,4.22e-10,22;UBERON:0001950,2.46e-09,20;UBERON:0000956,3.50e-08,25;UBERON:0000203,3.50e-08,25;UBERON:0004111,1.11e-07,240;UBERON:0004121,3.50e-07,171;UBERON:0000924,3.50e-07,171;UBERON:0006601,3.50e-07,171 | |||
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| ||
|short_description=p1@SGPP2 | |short_description=p1@SGPP2 | ||
}} | }} |
Revision as of 12:46, 17 November 2012
Short description: | p1@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SGPP2_5end |
Coexpression cluster: | C4192_gastric_salivary_immature_signet_adenocarcinoma_small_tubular |
Association with transcript: | 3bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.29e-37 | 114 |
regional part of nervous system | 6.49e-20 | 53 |
regional part of brain | 6.49e-20 | 53 |
neural tube | 8.15e-20 | 56 |
neural rod | 8.15e-20 | 56 |
future spinal cord | 8.15e-20 | 56 |
neural keel | 8.15e-20 | 56 |
regional part of forebrain | 1.62e-16 | 41 |
forebrain | 1.62e-16 | 41 |
anterior neural tube | 1.62e-16 | 41 |
future forebrain | 1.62e-16 | 41 |
brain | 3.64e-14 | 68 |
future brain | 3.64e-14 | 68 |
neural plate | 9.63e-13 | 82 |
presumptive neural plate | 9.63e-13 | 82 |
cerebral hemisphere | 1.88e-12 | 32 |
ecto-epithelium | 2.13e-12 | 104 |
brain grey matter | 2.76e-12 | 34 |
gray matter | 2.76e-12 | 34 |
organ system subdivision | 3.03e-12 | 223 |
telencephalon | 4.29e-12 | 34 |
central nervous system | 1.89e-11 | 81 |
neurectoderm | 2.09e-11 | 86 |
regional part of telencephalon | 3.26e-11 | 32 |
nervous system | 8.29e-11 | 89 |
pre-chordal neural plate | 2.45e-10 | 61 |
regional part of cerebral cortex | 4.22e-10 | 22 |
neocortex | 2.46e-09 | 20 |
cerebral cortex | 3.50e-08 | 25 |
pallium | 3.50e-08 | 25 |
anatomical conduit | 1.11e-07 | 240 |
ectoderm-derived structure | 3.50e-07 | 171 |
ectoderm | 3.50e-07 | 171 |
presumptive ectoderm | 3.50e-07 | 171 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.