FFCP PHASE1:Hg19::chr19:18896920..18896932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000136!9.89e-28!15;CL:0002334!3.39e-17!12;CL:0000153!5.97e-17!9;CL:0000447!5.97e-17!9;CL:0002615!1.94e-14!3;CL:0002580!2.31e-14!3;CL:0000135!5.09e-14!3;CL:0000386!5.09e-14!3;CL:0000388!5.09e-14!3;CL:0002579!1.11e-13!3;CL:0000057!2.01e-12!75;CL:0000667!6.36e-12!6;CL:0000058!6.36e-12!6;CL:0000138!6.36e-12!6;CL:0000499!1.49e-11!27;CL:0000327!1.15e-10!14;CL:0002617!2.62e-10!2;CL:0000325!1.98e-09!39;CL:0000134!4.96e-09!358;CL:0002320!1.07e-08!365;CL:0000055!7.00e-08!180;CL:0002620!8.98e-08!23;CL:0000219!1.57e-07!390 | |ontology_enrichment_celltype=CL:0000136!9.89e-28!15;CL:0002334!3.39e-17!12;CL:0000153!5.97e-17!9;CL:0000447!5.97e-17!9;CL:0002615!1.94e-14!3;CL:0002580!2.31e-14!3;CL:0000135!5.09e-14!3;CL:0000386!5.09e-14!3;CL:0000388!5.09e-14!3;CL:0002579!1.11e-13!3;CL:0000057!2.01e-12!75;CL:0000667!6.36e-12!6;CL:0000058!6.36e-12!6;CL:0000138!6.36e-12!6;CL:0000499!1.49e-11!27;CL:0000327!1.15e-10!14;CL:0002617!2.62e-10!2;CL:0000325!1.98e-09!39;CL:0000134!4.96e-09!358;CL:0002320!1.07e-08!365;CL:0000055!7.00e-08!180;CL:0002620!8.98e-08!23;CL:0000219!1.57e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.78e-27;12!CL:0000136;3.67e-26;13!CL:0002615;3.28e-22;3!CL:0002580;4.06e-22;3!CL:0000135;1.44e-21;3!CL:0000388;1.44e-21;3!CL:0002579;4.88e-21;3!CL:0000153;3.81e-19;9!CL:0000447;3.81e-19;9!CL:0000138;1.11e-18;6!CL:0002617;1.33e-15;2!CL:0000499;9.14e-15;28!CL:0000327;2.00e-11;15!CL:0002616;1.52e-08;1!CL:0002581;5.43e-08;1!CL:0000062;2.31e-07;9 | |ontology_enrichment_celltype_v019=CL:0002334;1.78e-27;12!CL:0000136;3.67e-26;13!CL:0002615;3.28e-22;3!CL:0002580;4.06e-22;3!CL:0000135;1.44e-21;3!CL:0000388;1.44e-21;3!CL:0002579;4.88e-21;3!CL:0000153;3.81e-19;9!CL:0000447;3.81e-19;9!CL:0000138;1.11e-18;6!CL:0002617;1.33e-15;2!CL:0000499;9.14e-15;28!CL:0000327;2.00e-11;15!CL:0002616;1.52e-08;1!CL:0002581;5.43e-08;1!CL:0000062;2.31e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.79e-29,15;CL:0002334,1.68e-27,12;CL:0002615,3.05e-22,3;CL:0002580,4.06e-22,3;CL:0000135,1.44e-21,3;CL:0000388,1.44e-21,3;CL:0002579,5.05e-21,3;CL:0000153,4.70e-19,9;CL:0000447,4.70e-19,9;CL:0000058,1.43e-18,6;CL:0000138,1.43e-18,6;CL:0002617,1.33e-15,2;CL:0000499,1.01e-14,28;CL:0000327,2.26e-11,15;CL:0000057,8.14e-11,76;CL:0000134,1.22e-10,354;CL:0002320,2.44e-10,361;CL:0000219,2.80e-09,386;CL:0002616,1.52e-08,1;CL:0002581,4.72e-08,1;CL:0000048,5.60e-08,427;CL:0000723,8.47e-08,433;CL:0000034,1.45e-07,441 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;5.43e-08;1 | |ontology_enrichment_disease_v019=DOID:3369;5.43e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.39e-26!6;UBERON:0002358!2.39e-26!6;UBERON:0003684!2.39e-26!6;UBERON:0001178!2.39e-26!6;UBERON:0004457!2.17e-22!12;UBERON:0000042!2.17e-22!12;UBERON:0000043!5.09e-14!3;UBERON:0000310!2.69e-11!10;UBERON:0001013!1.78e-10!14;UBERON:0001443!3.09e-10!11;UBERON:0005406!7.24e-10!2;UBERON:0002384!5.34e-09!375;UBERON:0002199!3.10e-07!45;UBERON:0002416!3.10e-07!45 | |ontology_enrichment_uberon=UBERON:0003688!2.39e-26!6;UBERON:0002358!2.39e-26!6;UBERON:0003684!2.39e-26!6;UBERON:0001178!2.39e-26!6;UBERON:0004457!2.17e-22!12;UBERON:0000042!2.17e-22!12;UBERON:0000043!5.09e-14!3;UBERON:0000310!2.69e-11!10;UBERON:0001013!1.78e-10!14;UBERON:0001443!3.09e-10!11;UBERON:0005406!7.24e-10!2;UBERON:0002384!5.34e-09!375;UBERON:0002199!3.10e-07!45;UBERON:0002416!3.10e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.98e-41;6!UBERON:0002358;1.98e-41;6!UBERON:0003684;1.98e-41;6!UBERON:0001178;1.98e-41;6!UBERON:0004457;3.02e-37;9!UBERON:0000042;3.02e-37;9!UBERON:0007846;1.44e-21;3!UBERON:0000043;1.44e-21;3!UBERON:0007845;1.44e-21;3!UBERON:0000310;6.71e-18;10!UBERON:0001443;2.94e-16;11!UBERON:0005406;7.84e-15;2!UBERON:0001013;5.44e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.98e-41;6!UBERON:0002358;1.98e-41;6!UBERON:0003684;1.98e-41;6!UBERON:0001178;1.98e-41;6!UBERON:0004457;3.02e-37;9!UBERON:0000042;3.02e-37;9!UBERON:0007846;1.44e-21;3!UBERON:0000043;1.44e-21;3!UBERON:0007845;1.44e-21;3!UBERON:0000310;6.71e-18;10!UBERON:0001443;2.94e-16;11!UBERON:0005406;7.84e-15;2!UBERON:0001013;5.44e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.91e-41,6;UBERON:0002358,1.91e-41,6;UBERON:0003684,1.91e-41,6;UBERON:0001178,1.91e-41,6;UBERON:0004457,9.17e-28,12;UBERON:0000042,9.17e-28,12;UBERON:0007846,1.44e-21,3;UBERON:0000043,1.44e-21,3;UBERON:0007845,1.44e-21,3;UBERON:0000310,6.71e-18,10;UBERON:0001443,2.95e-16,11;UBERON:0005406,6.82e-15,2;UBERON:0002384,5.61e-11,371;UBERON:0001013,5.09e-08,14 | |||
|phase1_expression=15.4426622379973,24.835660771354,6.20199378022273,27.0197905553452,13.4088328328186,12.2127393374052,2.53299878168311,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,8.11140506180613,2.3858578411533,11.1926020169606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.558350568994769,1.0126579934476,0.68205903612839,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50473049863859,11.3703752027992,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,5.95458738765064,13.3511916760614,25.5400685934097,3.58789617915963,5.62877973973374,1.12597744800525,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81098250601357,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83593523616777,6.00828317220844,8.21990468035199,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=15.4426622379973,24.835660771354,6.20199378022273,27.0197905553452,13.4088328328186,12.2127393374052,2.53299878168311,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,8.11140506180613,2.3858578411533,11.1926020169606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.558350568994769,1.0126579934476,0.68205903612839,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50473049863859,11.3703752027992,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,5.95458738765064,13.3511916760614,25.5400685934097,3.58789617915963,5.62877973973374,1.12597744800525,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81098250601357,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83593523616777,6.00828317220844,8.21990468035199,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18896920..18896932,- | |short_description=p@chr19:18896920..18896932,- | ||
}} | }} |
Revision as of 10:02, 17 November 2012
Short description: | p@chr19:18896920..18896932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18896920..18896932, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.79e-29 | 15 |
preadipocyte | 1.68e-27 | 12 |
adipocyte of omentum tissue | 3.05e-22 | 3 |
preadipocyte of the breast | 4.06e-22 | 3 |
fibrocyte | 1.44e-21 | 3 |
tendon cell | 1.44e-21 | 3 |
omentum preadipocyte | 5.05e-21 | 3 |
GAG secreting cell | 4.70e-19 | 9 |
carbohydrate secreting cell | 4.70e-19 | 9 |
chondroblast | 1.43e-18 | 6 |
chondrocyte | 1.43e-18 | 6 |
adipocyte of breast | 1.33e-15 | 2 |
stromal cell | 1.01e-14 | 28 |
extracellular matrix secreting cell | 2.26e-11 | 15 |
fibroblast | 8.14e-11 | 76 |
mesenchymal cell | 1.22e-10 | 354 |
connective tissue cell | 2.44e-10 | 361 |
motile cell | 2.80e-09 | 386 |
perirenal adipocyte cell | 1.52e-08 | 1 |
perirenal preadipocyte | 4.72e-08 | 1 |
multi fate stem cell | 5.60e-08 | 427 |
somatic stem cell | 8.47e-08 | 433 |
stem cell | 1.45e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.91e-41 | 6 |
peritoneum | 1.91e-41 | 6 |
abdominal cavity | 1.91e-41 | 6 |
visceral peritoneum | 1.91e-41 | 6 |
cavity lining | 9.17e-28 | 12 |
serous membrane | 9.17e-28 | 12 |
dense regular connective tissue | 1.44e-21 | 3 |
tendon | 1.44e-21 | 3 |
regular connective tissue | 1.44e-21 | 3 |
breast | 6.71e-18 | 10 |
chest | 2.95e-16 | 11 |
perirenal fat | 6.82e-15 | 2 |
connective tissue | 5.61e-11 | 371 |
adipose tissue | 5.09e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.41e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.