FFCP PHASE1:Hg19::chr6:32938512..32938523,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000860!5.43e-16!45;CL:0002057!3.68e-15!42;CL:0000738!3.72e-13!140;CL:0002031!8.44e-13!124;CL:0002087!8.19e-12!119;CL:0002032!3.85e-10!165;CL:0000837!3.85e-10!165;CL:0000037!5.08e-10!172;CL:0000566!5.08e-10!172;CL:0000839!9.59e-10!70;CL:0000988!1.32e-09!182;CL:0000557!2.93e-09!71;CL:0002194!5.25e-09!63;CL:0000576!5.25e-09!63;CL:0000040!5.25e-09!63;CL:0000559!5.25e-09!63;CL:0000766!1.16e-08!76;CL:0002009!1.44e-08!65;CL:0000134!2.27e-07!358;CL:0002320!4.89e-07!365;CL:0000219!7.01e-07!390 | |ontology_enrichment_celltype=CL:0000860!5.43e-16!45;CL:0002057!3.68e-15!42;CL:0000738!3.72e-13!140;CL:0002031!8.44e-13!124;CL:0002087!8.19e-12!119;CL:0002032!3.85e-10!165;CL:0000837!3.85e-10!165;CL:0000037!5.08e-10!172;CL:0000566!5.08e-10!172;CL:0000839!9.59e-10!70;CL:0000988!1.32e-09!182;CL:0000557!2.93e-09!71;CL:0002194!5.25e-09!63;CL:0000576!5.25e-09!63;CL:0000040!5.25e-09!63;CL:0000559!5.25e-09!63;CL:0000766!1.16e-08!76;CL:0002009!1.44e-08!65;CL:0000134!2.27e-07!358;CL:0002320!4.89e-07!365;CL:0000219!7.01e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.59e-56;33!CL:0002057;2.59e-56;33!CL:0000473;2.16e-38;39!CL:0000234;2.16e-38;39!CL:0000576;2.40e-25;48!CL:0000766;2.80e-12;69!CL:0002087;6.82e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;2.59e-56;33!CL:0002057;2.59e-56;33!CL:0000473;2.16e-38;39!CL:0000234;2.16e-38;39!CL:0000576;2.40e-25;48!CL:0000766;2.80e-12;69!CL:0002087;6.82e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-47,42;CL:0002057,1.56e-47,42;CL:0000473,1.62e-40,48;CL:0000234,1.62e-40,48;CL:0002194,1.02e-30,59;CL:0000576,1.02e-30,59;CL:0000040,1.02e-30,59;CL:0000559,1.02e-30,59;CL:0002009,1.86e-29,61;CL:0000839,1.23e-26,66;CL:0000557,4.01e-26,67;CL:0000766,9.06e-24,72;CL:0002087,1.04e-20,115;CL:0000738,1.49e-19,136;CL:0002031,1.89e-19,120;CL:0000763,2.19e-14,108;CL:0000049,2.19e-14,108;CL:0000037,6.48e-14,168;CL:0002032,5.23e-13,161;CL:0000837,5.23e-13,161;CL:0000988,1.04e-12,177;CL:0000048,5.77e-07,427;CL:0000134,5.82e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-34;42 | |ontology_enrichment_development_v019=CL:0002057;1.86e-34;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.97e-08!80;UBERON:0001474!4.02e-08!86 | |ontology_enrichment_uberon=UBERON:0002371!2.97e-08!80;UBERON:0001474!4.02e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.82e-11;4!UBERON:0006947;2.96e-09;3!UBERON:0004054;2.96e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0005904;1.82e-11;4!UBERON:0006947;2.96e-09;3!UBERON:0004054;2.96e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.19e-24,76;UBERON:0001474,1.94e-21,82;UBERON:0004765,8.00e-19,90;UBERON:0002405,5.84e-18,93;UBERON:0002390,1.22e-16,98;UBERON:0003061,1.22e-16,98;UBERON:0001434,3.76e-16,100;UBERON:0003081,8.40e-16,203;UBERON:0002193,2.23e-14,108;UBERON:0002204,5.89e-13,167;UBERON:0005904,5.73e-12,4;UBERON:0006947,1.54e-09,3;UBERON:0004054,1.54e-09,3;UBERON:0000926,3.43e-09,315;UBERON:0004120,3.43e-09,315;UBERON:0006603,3.43e-09,315 | |||
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| ||
|short_description=p4@HLA-DMA | |short_description=p4@HLA-DMA | ||
}} | }} |
Revision as of 06:31, 17 November 2012
Short description: | p4@HLA-DMA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HLA-DMA_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000473725_5end |
EntrezGene: | HLA-DMA |
HGNC: | 4934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-47 | 42 |
defensive cell | 1.62e-40 | 48 |
phagocyte | 1.62e-40 | 48 |
monopoietic cell | 1.02e-30 | 59 |
monocyte | 1.02e-30 | 59 |
monoblast | 1.02e-30 | 59 |
promonocyte | 1.02e-30 | 59 |
macrophage dendritic cell progenitor | 1.86e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.23e-26 | 66 |
granulocyte monocyte progenitor cell | 4.01e-26 | 67 |
myeloid leukocyte | 9.06e-24 | 72 |
nongranular leukocyte | 1.04e-20 | 115 |
leukocyte | 1.49e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.89e-19 | 120 |
myeloid cell | 2.19e-14 | 108 |
common myeloid progenitor | 2.19e-14 | 108 |
hematopoietic stem cell | 6.48e-14 | 168 |
hematopoietic oligopotent progenitor cell | 5.23e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.23e-13 | 161 |
hematopoietic cell | 1.04e-12 | 177 |
multi fate stem cell | 5.77e-07 | 427 |
mesenchymal cell | 5.82e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.19e-24 | 76 |
bone element | 1.94e-21 | 82 |
skeletal element | 8.00e-19 | 90 |
immune system | 5.84e-18 | 93 |
hematopoietic system | 1.22e-16 | 98 |
blood island | 1.22e-16 | 98 |
skeletal system | 3.76e-16 | 100 |
lateral plate mesoderm | 8.40e-16 | 203 |
hemolymphoid system | 2.23e-14 | 108 |
musculoskeletal system | 5.89e-13 | 167 |
duct of male reproductive system | 5.73e-12 | 4 |
male genital duct | 1.54e-09 | 3 |
internal male genitalia | 1.54e-09 | 3 |
mesoderm | 3.43e-09 | 315 |
mesoderm-derived structure | 3.43e-09 | 315 |
presumptive mesoderm | 3.43e-09 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.