FFCP PHASE1:Hg19::chr15:101792139..101792159,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!3.37e-10!42;CL:0000055!8.31e-10!180;CL:0000766!9.95e-10!76;CL:0000048!1.12e-09!430;CL:0000860!2.40e-09!45;CL:0000034!4.33e-09!444;CL:0000723!7.79e-09!436;CL:0000183!3.70e-08!59;CL:0000187!1.07e-07!54;CL:0000359!1.08e-07!32;CL:0000763!7.94e-07!112;CL:0000049!7.94e-07!112;CL:0000680!9.49e-07!57;CL:0000056!9.49e-07!57;CL:0000355!9.49e-07!57 | |ontology_enrichment_celltype=CL:0002057!3.37e-10!42;CL:0000055!8.31e-10!180;CL:0000766!9.95e-10!76;CL:0000048!1.12e-09!430;CL:0000860!2.40e-09!45;CL:0000034!4.33e-09!444;CL:0000723!7.79e-09!436;CL:0000183!3.70e-08!59;CL:0000187!1.07e-07!54;CL:0000359!1.08e-07!32;CL:0000763!7.94e-07!112;CL:0000049!7.94e-07!112;CL:0000680!9.49e-07!57;CL:0000056!9.49e-07!57;CL:0000355!9.49e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.89e-10;33!CL:0002057;6.89e-10;33!CL:0000359;2.14e-07;32!CL:0000473;3.84e-07;39!CL:0000234;3.84e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;6.89e-10;33!CL:0002057;6.89e-10;33!CL:0000359;2.14e-07;32!CL:0000473;3.84e-07;39!CL:0000234;3.84e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.37e-10,42;CL:0002057,3.37e-10,42;CL:0000766,7.48e-10,72;CL:0000048,7.88e-10,427;CL:0000034,3.11e-09,441;CL:0000723,5.60e-09,433;CL:0000473,8.26e-09,48;CL:0000234,8.26e-09,48;CL:0000187,1.05e-07,55;CL:0000359,1.08e-07,32;CL:0000763,8.33e-07,108;CL:0000049,8.33e-07,108;CL:0000680,9.12e-07,58;CL:0000056,9.12e-07,58;CL:0000355,9.12e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;5.82e-08;42 | |ontology_enrichment_development_v019=CL:0002057;5.82e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.22e-19!110;UBERON:0001009!1.29e-19!113;UBERON:0003081!3.37e-15!216;UBERON:0002049!2.38e-13!79;UBERON:0007798!2.38e-13!79;UBERON:0004872!5.32e-13!84;UBERON:0002204!1.45e-11!167;UBERON:0000055!1.28e-10!69;UBERON:0001981!6.19e-10!60;UBERON:0007500!6.19e-10!60;UBERON:0004537!6.19e-10!60;UBERON:0006965!6.19e-10!60;UBERON:0001637!2.27e-08!42;UBERON:0003509!2.27e-08!42;UBERON:0004572!2.27e-08!42;UBERON:0002193!3.36e-08!112;UBERON:0004573!2.44e-07!33;UBERON:0004571!2.44e-07!33;UBERON:0002390!2.49e-07!102;UBERON:0003061!2.49e-07!102;UBERON:0003914!8.58e-07!118;UBERON:0000948!8.83e-07!24;UBERON:0005498!8.83e-07!24;UBERON:0004140!8.83e-07!24;UBERON:0009881!8.83e-07!24;UBERON:0004141!8.83e-07!24;UBERON:0003084!8.83e-07!24;UBERON:0007005!8.83e-07!24;UBERON:0004139!8.83e-07!24;UBERON:0004291!8.83e-07!24 | |ontology_enrichment_uberon=UBERON:0004535!1.22e-19!110;UBERON:0001009!1.29e-19!113;UBERON:0003081!3.37e-15!216;UBERON:0002049!2.38e-13!79;UBERON:0007798!2.38e-13!79;UBERON:0004872!5.32e-13!84;UBERON:0002204!1.45e-11!167;UBERON:0000055!1.28e-10!69;UBERON:0001981!6.19e-10!60;UBERON:0007500!6.19e-10!60;UBERON:0004537!6.19e-10!60;UBERON:0006965!6.19e-10!60;UBERON:0001637!2.27e-08!42;UBERON:0003509!2.27e-08!42;UBERON:0004572!2.27e-08!42;UBERON:0002193!3.36e-08!112;UBERON:0004573!2.44e-07!33;UBERON:0004571!2.44e-07!33;UBERON:0002390!2.49e-07!102;UBERON:0003061!2.49e-07!102;UBERON:0003914!8.58e-07!118;UBERON:0000948!8.83e-07!24;UBERON:0005498!8.83e-07!24;UBERON:0004140!8.83e-07!24;UBERON:0009881!8.83e-07!24;UBERON:0004141!8.83e-07!24;UBERON:0003084!8.83e-07!24;UBERON:0007005!8.83e-07!24;UBERON:0004139!8.83e-07!24;UBERON:0004291!8.83e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.87e-07;33!UBERON:0004571;8.87e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004573;8.87e-07;33!UBERON:0004571;8.87e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.90e-19,109;UBERON:0001009,4.11e-19,112;UBERON:0003081,2.63e-17,203;UBERON:0000926,7.76e-14,315;UBERON:0004120,7.76e-14,315;UBERON:0006603,7.76e-14,315;UBERON:0002049,7.02e-13,78;UBERON:0007798,7.02e-13,78;UBERON:0002204,1.25e-12,167;UBERON:0004872,1.52e-12,83;UBERON:0000055,3.55e-10,68;UBERON:0007500,1.75e-09,59;UBERON:0001981,1.75e-09,59;UBERON:0004537,1.75e-09,59;UBERON:0006965,1.75e-09,59;UBERON:0000479,1.20e-08,773;UBERON:0001637,2.27e-08,42;UBERON:0003509,2.27e-08,42;UBERON:0004572,2.27e-08,42;UBERON:0002193,3.37e-08,108;UBERON:0004573,2.44e-07,33;UBERON:0004571,2.44e-07,33;UBERON:0002390,2.49e-07,98;UBERON:0003061,2.49e-07,98;UBERON:0000948,8.83e-07,24;UBERON:0005498,8.83e-07,24;UBERON:0004140,8.83e-07,24;UBERON:0009881,8.83e-07,24;UBERON:0004141,8.83e-07,24;UBERON:0003084,8.83e-07,24;UBERON:0007005,8.83e-07,24;UBERON:0004139,8.83e-07,24;UBERON:0004291,8.83e-07,24;UBERON:0001434,9.30e-07,100;UBERON:0003914,9.33e-07,117 | |||
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| ||
|short_description=p1@CHSY1 | |short_description=p1@CHSY1 | ||
}} | }} |
Revision as of 04:10, 16 November 2012
Short description: | p1@CHSY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CHSY1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000254190, NM_014918_5end |
EntrezGene: | CHSY1 |
HGNC: | 17198 |
UniProt: | Q86X52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.37e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.37e-10 | 42 |
myeloid leukocyte | 7.48e-10 | 72 |
multi fate stem cell | 7.88e-10 | 427 |
stem cell | 3.11e-09 | 441 |
somatic stem cell | 5.60e-09 | 433 |
defensive cell | 8.26e-09 | 48 |
phagocyte | 8.26e-09 | 48 |
muscle cell | 1.05e-07 | 55 |
vascular associated smooth muscle cell | 1.08e-07 | 32 |
myeloid cell | 8.33e-07 | 108 |
common myeloid progenitor | 8.33e-07 | 108 |
muscle precursor cell | 9.12e-07 | 58 |
myoblast | 9.12e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.12e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.90e-19 | 109 |
circulatory system | 4.11e-19 | 112 |
lateral plate mesoderm | 2.63e-17 | 203 |
mesoderm | 7.76e-14 | 315 |
mesoderm-derived structure | 7.76e-14 | 315 |
presumptive mesoderm | 7.76e-14 | 315 |
vasculature | 7.02e-13 | 78 |
vascular system | 7.02e-13 | 78 |
musculoskeletal system | 1.25e-12 | 167 |
splanchnic layer of lateral plate mesoderm | 1.52e-12 | 83 |
vessel | 3.55e-10 | 68 |
epithelial tube open at both ends | 1.75e-09 | 59 |
blood vessel | 1.75e-09 | 59 |
blood vasculature | 1.75e-09 | 59 |
vascular cord | 1.75e-09 | 59 |
tissue | 1.20e-08 | 773 |
artery | 2.27e-08 | 42 |
arterial blood vessel | 2.27e-08 | 42 |
arterial system | 2.27e-08 | 42 |
hemolymphoid system | 3.37e-08 | 108 |
systemic artery | 2.44e-07 | 33 |
systemic arterial system | 2.44e-07 | 33 |
hematopoietic system | 2.49e-07 | 98 |
blood island | 2.49e-07 | 98 |
heart | 8.83e-07 | 24 |
primitive heart tube | 8.83e-07 | 24 |
primary heart field | 8.83e-07 | 24 |
anterior lateral plate mesoderm | 8.83e-07 | 24 |
heart tube | 8.83e-07 | 24 |
heart primordium | 8.83e-07 | 24 |
cardiac mesoderm | 8.83e-07 | 24 |
cardiogenic plate | 8.83e-07 | 24 |
heart rudiment | 8.83e-07 | 24 |
skeletal system | 9.30e-07 | 100 |
epithelial tube | 9.33e-07 | 117 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.