FFCP PHASE1:Hg19::chr3:161089270..161089273,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!3.72e-11!43;CL:0002231!3.03e-09!3;CL:0000312!1.42e-08!5;CL:0002251!2.15e-07!21;CL:0000223!3.54e-07!59;CL:0000240!3.78e-07!6;CL:0000311!3.78e-07!6;CL:0000079!3.78e-07!6;CL:0000237!3.78e-07!6;CL:0000036!3.78e-07!6;CL:0000357!3.78e-07!6;CL:0000114!3.78e-07!6 | |ontology_enrichment_celltype=CL:0002076!3.72e-11!43;CL:0002231!3.03e-09!3;CL:0000312!1.42e-08!5;CL:0002251!2.15e-07!21;CL:0000223!3.54e-07!59;CL:0000240!3.78e-07!6;CL:0000311!3.78e-07!6;CL:0000079!3.78e-07!6;CL:0000237!3.78e-07!6;CL:0000036!3.78e-07!6;CL:0000357!3.78e-07!6;CL:0000114!3.78e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002535;9.27e-07;2 | |ontology_enrichment_celltype_v019=CL:0002535;9.27e-07;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.91e-13;1 | |ontology_enrichment_development_v019=UBERON:0008425;9.91e-13;1 | ||
|ontology_enrichment_disease=DOID:5093!3.91e-13!4;DOID:1612!3.91e-13!4 | |ontology_enrichment_disease=DOID:5093!3.91e-13!4;DOID:1612!3.91e-13!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.67e-46;4!DOID:1612;8.67e-46;4!DOID:4362;1.11e-09;5!DOID:299;1.81e-07;25!DOID:3910;9.27e-07;2 | |ontology_enrichment_disease_v019=DOID:5093;8.67e-46;4!DOID:1612;8.67e-46;4!DOID:4362;1.11e-09;5!DOID:299;1.81e-07;25!DOID:3910;9.27e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,8.70e-46,4;DOID:1612,8.70e-46,4;DOID:4362,1.11e-09,5;DOID:305,3.56e-09,106;DOID:299,1.71e-07,25;DOID:7,3.25e-07,39;DOID:3910,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.14e-07!6;UBERON:0001560!1.14e-07!6;UBERON:0000161!1.47e-07!35;UBERON:0000162!5.52e-07!14;UBERON:0001353!5.52e-07!14;UBERON:0000163!5.52e-07!14;UBERON:0006866!5.52e-07!14;UBERON:0000164!5.52e-07!14;UBERON:0000931!5.52e-07!14 | |ontology_enrichment_uberon=UBERON:0000002!1.14e-07!6;UBERON:0001560!1.14e-07!6;UBERON:0000161!1.47e-07!35;UBERON:0000162!5.52e-07!14;UBERON:0001353!5.52e-07!14;UBERON:0000163!5.52e-07!14;UBERON:0006866!5.52e-07!14;UBERON:0000164!5.52e-07!14;UBERON:0000931!5.52e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.53e-18;10!UBERON:0001443;7.00e-17;11!UBERON:0007029;1.32e-12;1!UBERON:0000002;3.25e-08;6!UBERON:0001560;3.25e-08;6!UBERON:0001255;9.27e-07;2!UBERON:0004903;9.27e-07;2!UBERON:0006955;9.27e-07;2!UBERON:0004801;9.27e-07;2!UBERON:0001556;9.27e-07;2!UBERON:0002173;9.27e-07;2!UBERON:0002186;9.27e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000310;1.53e-18;10!UBERON:0001443;7.00e-17;11!UBERON:0007029;1.32e-12;1!UBERON:0000002;3.25e-08;6!UBERON:0001560;3.25e-08;6!UBERON:0001255;9.27e-07;2!UBERON:0004903;9.27e-07;2!UBERON:0006955;9.27e-07;2!UBERON:0004801;9.27e-07;2!UBERON:0001556;9.27e-07;2!UBERON:0002173;9.27e-07;2!UBERON:0002186;9.27e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.54e-18,10;UBERON:0001443,7.01e-17,11;UBERON:0007029,1.40e-12,1;UBERON:0000002,3.25e-08,6;UBERON:0001560,3.25e-08,6;UBERON:0000162,1.25e-07,14;UBERON:0001353,1.25e-07,14;UBERON:0000163,1.25e-07,14;UBERON:0006866,1.25e-07,14;UBERON:0000164,1.25e-07,14;UBERON:0000931,1.25e-07,14;UBERON:0004122,3.74e-07,15;UBERON:0004903,8.52e-07,2;UBERON:0002173,8.52e-07,2;UBERON:0002186,8.52e-07,2;UBERON:0001255,9.02e-07,2;UBERON:0001556,9.02e-07,2 | |||
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| ||
|short_description=p3@SPTSSB | |short_description=p3@SPTSSB | ||
}} | }} |
Revision as of 03:58, 16 November 2012
Short description: | p3@SPTSSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPTSSB_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 15bp_to_ENST00000497137_5end |
EntrezGene: | SPTSSB |
HGNC: | 24045 |
UniProt: | Q8NFR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
breast | 1.54e-18 | 10 |
chest | 7.01e-17 | 11 |
surface | 1.40e-12 | 1 |
uterine cervix | 3.25e-08 | 6 |
neck of organ | 3.25e-08 | 6 |
cloaca | 1.25e-07 | 14 |
anal region | 1.25e-07 | 14 |
embryonic cloaca | 1.25e-07 | 14 |
terminal part of digestive tract | 1.25e-07 | 14 |
primitive urogenital sinus | 1.25e-07 | 14 |
proctodeum | 1.25e-07 | 14 |
genitourinary system | 3.74e-07 | 15 |
bronchoalveolar duct junction | 8.52e-07 | 2 |
alveolar duct | 8.52e-07 | 2 |
bronchiole | 8.52e-07 | 2 |
urinary bladder | 9.02e-07 | 2 |
lower urinary tract | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.70e-46 | 4 |
breast cancer | 8.70e-46 | 4 |
cervical cancer | 1.11e-09 | 5 |
carcinoma | 3.56e-09 | 106 |
adenocarcinoma | 1.71e-07 | 25 |
disease of anatomical entity | 3.25e-07 | 39 |
lung adenocarcinoma | 8.52e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.