FFCP PHASE1:Hg19::chr3:56950407..56950470,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!3.51e-42!172;CL:0000566!3.51e-42!172;CL:0000988!4.35e-40!182;CL:0002032!1.18e-38!165;CL:0000837!1.18e-38!165;CL:0000738!3.31e-37!140;CL:0002087!5.60e-35!119;CL:0002031!1.53e-32!124;CL:0000542!6.58e-28!53;CL:0000051!6.58e-28!53;CL:0000838!4.27e-27!52;CL:0000084!2.45e-17!25;CL:0000827!2.45e-17!25;CL:0000791!5.85e-16!18;CL:0000789!5.85e-16!18;CL:0002420!5.85e-16!18;CL:0002419!5.85e-16!18;CL:0000790!5.85e-16!18;CL:0000763!6.30e-14!112;CL:0000049!6.30e-14!112;CL:0000766!6.41e-11!76;CL:0000625!1.56e-10!11;CL:0000839!6.73e-10!70;CL:0000945!1.82e-09!24;CL:0000826!1.82e-09!24;CL:0000557!3.61e-09!71;CL:0002057!9.66e-09!42;CL:0002194!1.22e-08!63;CL:0000576!1.22e-08!63;CL:0000040!1.22e-08!63;CL:0000559!1.22e-08!63;CL:0002009!5.45e-08!65;CL:0000860!1.69e-07!45;CL:0000236!8.33e-07!14 | |ontology_enrichment_celltype=CL:0000037!3.51e-42!172;CL:0000566!3.51e-42!172;CL:0000988!4.35e-40!182;CL:0002032!1.18e-38!165;CL:0000837!1.18e-38!165;CL:0000738!3.31e-37!140;CL:0002087!5.60e-35!119;CL:0002031!1.53e-32!124;CL:0000542!6.58e-28!53;CL:0000051!6.58e-28!53;CL:0000838!4.27e-27!52;CL:0000084!2.45e-17!25;CL:0000827!2.45e-17!25;CL:0000791!5.85e-16!18;CL:0000789!5.85e-16!18;CL:0002420!5.85e-16!18;CL:0002419!5.85e-16!18;CL:0000790!5.85e-16!18;CL:0000763!6.30e-14!112;CL:0000049!6.30e-14!112;CL:0000766!6.41e-11!76;CL:0000625!1.56e-10!11;CL:0000839!6.73e-10!70;CL:0000945!1.82e-09!24;CL:0000826!1.82e-09!24;CL:0000557!3.61e-09!71;CL:0002057!9.66e-09!42;CL:0002194!1.22e-08!63;CL:0000576!1.22e-08!63;CL:0000040!1.22e-08!63;CL:0000559!1.22e-08!63;CL:0002009!5.45e-08!65;CL:0000860!1.69e-07!45;CL:0000236!8.33e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.01e-19;18!CL:0000789;3.01e-19;18!CL:0002419;3.01e-19;18!CL:0000084;7.23e-19;25!CL:0000542;1.29e-17;53!CL:0000625;1.36e-12;11!CL:0000945;1.07e-10;24!CL:0002087;3.53e-10;104!CL:0000236;1.02e-07;13!CL:0000624;1.86e-07;6!CL:0000738;6.12e-07;136 | |ontology_enrichment_celltype_v019=CL:0000791;3.01e-19;18!CL:0000789;3.01e-19;18!CL:0002419;3.01e-19;18!CL:0000084;7.23e-19;25!CL:0000542;1.29e-17;53!CL:0000625;1.36e-12;11!CL:0000945;1.07e-10;24!CL:0002087;3.53e-10;104!CL:0000236;1.02e-07;13!CL:0000624;1.86e-07;6!CL:0000738;6.12e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.87e-37,168;CL:0002087,3.73e-34,115;CL:0000988,5.69e-34,177;CL:0002032,8.26e-34,161;CL:0000837,8.26e-34,161;CL:0000738,3.25e-33,136;CL:0000542,1.71e-31,53;CL:0000051,1.71e-31,53;CL:0000838,1.64e-30,52;CL:0002031,3.15e-28,120;CL:0000791,2.82e-19,18;CL:0000789,2.82e-19,18;CL:0002420,2.82e-19,18;CL:0002419,2.82e-19,18;CL:0000790,2.82e-19,18;CL:0000084,8.31e-19,25;CL:0000827,8.31e-19,25;CL:0000625,1.35e-12,11;CL:0000945,7.48e-11,24;CL:0000826,7.48e-11,24;CL:0000763,3.09e-09,108;CL:0000049,3.09e-09,108;CL:0000236,3.65e-08,14;CL:0000766,1.44e-07,72;CL:0000624,1.77e-07,6;CL:0000473,3.68e-07,48;CL:0000234,3.68e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;3.01e-19;18!CL:0000051;1.29e-17;53 | |ontology_enrichment_development_v019=CL:0000790;3.01e-19;18!CL:0000051;1.29e-17;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-23!115;UBERON:0002390!1.68e-16!102;UBERON:0003061!1.68e-16!102;UBERON:0002193!4.38e-15!112;UBERON:0000178!2.21e-10!15;UBERON:0000179!2.21e-10!15;UBERON:0000463!2.21e-10!15;UBERON:0002371!8.54e-08!80 | |ontology_enrichment_uberon=UBERON:0007023!3.50e-23!115;UBERON:0002390!1.68e-16!102;UBERON:0003061!1.68e-16!102;UBERON:0002193!4.38e-15!112;UBERON:0000178!2.21e-10!15;UBERON:0000179!2.21e-10!15;UBERON:0000463!2.21e-10!15;UBERON:0002371!8.54e-08!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.21e-10;15!UBERON:0000179;2.21e-10;15!UBERON:0000463;2.21e-10;15!UBERON:0002390;3.04e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.21e-10;15!UBERON:0000179;2.21e-10;15!UBERON:0000463;2.21e-10;15!UBERON:0002390;3.04e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.70e-13,98;UBERON:0003061,2.70e-13,98;UBERON:0007023,5.51e-13,114;UBERON:0002193,4.20e-12,108;UBERON:0000178,2.48e-10,15;UBERON:0000179,2.48e-10,15;UBERON:0000463,2.48e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8374521656558,16.5022184794391,22.1177295491439,4.32700704533794,10.747223146722,2.78669021968937,0,0,0,5.50017124120142,0,4.40400659002271,4.9859586767869,1.60435557976113,6.07630438004385,0.895661896959697,5.83008598834163,2.06060454107349,5.08893835728477,3.02300754951048,7.76268995801012,0.929716147622738,2.46700732813095,0,6.61692502340946,4.61089271752381,3.54723344832878,1.03423704220986,0,0,1.88242339542605,0.818718450173537,0.898893937780338,3.97909060082173,3.53021929783703,4.47535988059329,9.56568770541477,8.37747362010854,11.5080682643827,0,0,0.622822248995575,2.51248665256743,2.08593167368081,2.6062661364614,1.21079900526674,0.736555271975129,1.26584954976354,0.422510572623884,0,0.838634582033504,2.02191536063691,0.901061357049038,1.76798145366788,0.285012743741249,0.19891667719909,0,1.75996244461323,8.19207916893197,4.44754626931777,5.9742231159311,4.80475184443215,4.59801951963587,7.27149360063348,4.77026877267682,6.83055562931338,5.28513470433845,6.88091810625412,0,2.24203425192614,2.10707267820062,24.9821408044568,15.3274197472174,35.3634578279156,39.2888264168093,19.5553359980154,24.1458380924714,17.534405556712,29.523771074571,26.8091375802102,34.5592875550449,37.9125409271022,30.1014601355337,24.9713947314966,25.4878752135698,25.1478516185122,42.6010536030527,35.2922020325704,37.4557159325598,42.8595647600405,41.3579100846117,42.9206952834152,55.667646168186,66.2911593091097,37.5907188902434,31.9030892389645,35.1667256445898,34.7828525069655,40.9557155694139,56.2188269485556,40.7256873515709,40.2352718491313,18.3462136334507,10.9650480271238,13.0341963494519,0,0,0,0,0,0,0,0,0.283604451492204,0,0.263504357079378,9.10304574709103,0,0,0.649094787309367,0.348259474598534,1.06366368415092,2.38490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.337834441449967,0,0.949265659568129,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,0,0,0,0,0,0.590789906681404,1.7658523976586,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,1.72351904261178,3.04205544681009,2.67536092119711,0,0,0,0,0,0,1.97065295158377,1.05658120815871,0.829312462163088,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0,0,0,11.5447698313333,18.1268299385773,9.05635814409973,12.3209314828558,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1241787951489,10.5699958401122,19.4244155202269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,2.27466768141793,2.04112446331819,3.45465465763423,4.62681758070868,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,21.8202471969833,17.5866557642746,18.2287099895732,25.0143364230678,25.504460931344,22.6965658917451,18.3610688660959,21.4143797599453,0.213648142254946,0,0,28.2420826191092,0,1.4939787103167,8.44959245462758,32.3318581721163,16.8524725716483,21.5907054378361,12.6602556707077,3.08876895924805,0,0,15.038068625404,3.21654377823046,2.56940920165919,3.63239472943886,0.851692475380653,7.21361223987106,0,0,0,8.20630000688569,0,0,1.6227340708559,41.6339959997275,1.4098700508785,0,7.61842532213849,0,1.11443384277478,0,0,0,0,0,0.140669416410513,0,3.29607748453519,0,3.98495976502139,9.66993704359017,0,0,3.93871377475422,0,0,0,0,4.04437963111428,21.5534783112246,0,0.969332746095218,0.463840490809256,0,0,0,3.62499787717397,0,0,0,0,6.9985107211981,0,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0,10.3882848980126,0,0,0,0,0.31900115973192,0.183195186803725,0,6.13159789174419,22.2911964080935,0,0,0,0,0,0.794682894901893,0,0,0,0,1.99052386215701,2.29989667708682,4.27721101453538,0.296521128680622,0.247127877893006,1.04421949505455,0.471807930864739,7.2231988256891,0.234264445725339,8.5753750931363,0,0,1.18375320854817,3.62972148145992,0.30607276163049,3.79119477770928,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,6.98906672968121,0,0,0,0,5.43138492335149,0,4.06765333404958,0,0,0.569797163602908,0,0,4.26905989478705,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.410716136675979,1.27746588066972,0,0.262887354279314,5.86493042671734,8.70809611244398,8.61447629492177,2.79550600698588,4.72148652950228,3.79391477651183,12.1602085200975,0,0,0,0,0,0,24.5552662990775,0,0,0,0,0,0,0,0.485996453264197,0,6.38326229123505,10.1237355100546,0,0,0,5.71756261098694,7.28301167401975,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,1.32506888912221,0,0.13223260174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| ||
|short_description=p3@ARHGEF3 | |short_description=p3@ARHGEF3 | ||
}} | }} |
Revision as of 02:08, 16 November 2012
Short description: | p3@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARHGEF3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 28bp_to_ENST00000496106, uc011bew.1_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | E9PG37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.87e-37 | 168 |
nongranular leukocyte | 3.73e-34 | 115 |
hematopoietic cell | 5.69e-34 | 177 |
hematopoietic oligopotent progenitor cell | 8.26e-34 | 161 |
hematopoietic multipotent progenitor cell | 8.26e-34 | 161 |
leukocyte | 3.25e-33 | 136 |
lymphocyte | 1.71e-31 | 53 |
common lymphoid progenitor | 1.71e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.64e-30 | 52 |
hematopoietic lineage restricted progenitor cell | 3.15e-28 | 120 |
mature alpha-beta T cell | 2.82e-19 | 18 |
alpha-beta T cell | 2.82e-19 | 18 |
immature T cell | 2.82e-19 | 18 |
mature T cell | 2.82e-19 | 18 |
immature alpha-beta T cell | 2.82e-19 | 18 |
T cell | 8.31e-19 | 25 |
pro-T cell | 8.31e-19 | 25 |
CD8-positive, alpha-beta T cell | 1.35e-12 | 11 |
lymphocyte of B lineage | 7.48e-11 | 24 |
pro-B cell | 7.48e-11 | 24 |
myeloid cell | 3.09e-09 | 108 |
common myeloid progenitor | 3.09e-09 | 108 |
B cell | 3.65e-08 | 14 |
myeloid leukocyte | 1.44e-07 | 72 |
CD4-positive, alpha-beta T cell | 1.77e-07 | 6 |
defensive cell | 3.68e-07 | 48 |
phagocyte | 3.68e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.70e-13 | 98 |
blood island | 2.70e-13 | 98 |
adult organism | 5.51e-13 | 114 |
hemolymphoid system | 4.20e-12 | 108 |
blood | 2.48e-10 | 15 |
haemolymphatic fluid | 2.48e-10 | 15 |
organism substance | 2.48e-10 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.