FFCP PHASE1:Hg19::chr6:33080222..33080247,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!5.38e-37!140;CL:0002087!1.81e-32!119;CL:0000988!4.86e-31!182;CL:0000037!1.73e-30!172;CL:0000566!1.73e-30!172;CL:0002031!5.11e-29!124;CL:0002032!1.92e-25!165;CL:0000837!1.92e-25!165;CL:0000945!2.19e-20!24;CL:0000826!2.19e-20!24;CL:0002057!2.82e-17!42;CL:0000451!5.40e-17!10;CL:0002009!8.85e-17!65;CL:0000236!1.28e-16!14;CL:0000860!1.34e-15!45;CL:0002194!5.88e-15!63;CL:0000576!5.88e-15!63;CL:0000040!5.88e-15!63;CL:0000559!5.88e-15!63;CL:0000838!6.85e-15!52;CL:0000557!1.52e-14!71;CL:0000542!1.87e-14!53;CL:0000051!1.87e-14!53;CL:0000990!8.83e-14!8;CL:0000766!8.43e-13!76;CL:0000839!1.42e-12!70;CL:0000763!8.08e-12!112;CL:0000049!8.08e-12!112;CL:0000080!1.19e-09!6;CL:0000453!3.73e-09!5;CL:0000840!4.98e-09!5;CL:0001029!4.98e-09!5 | |ontology_enrichment_celltype=CL:0000738!5.38e-37!140;CL:0002087!1.81e-32!119;CL:0000988!4.86e-31!182;CL:0000037!1.73e-30!172;CL:0000566!1.73e-30!172;CL:0002031!5.11e-29!124;CL:0002032!1.92e-25!165;CL:0000837!1.92e-25!165;CL:0000945!2.19e-20!24;CL:0000826!2.19e-20!24;CL:0002057!2.82e-17!42;CL:0000451!5.40e-17!10;CL:0002009!8.85e-17!65;CL:0000236!1.28e-16!14;CL:0000860!1.34e-15!45;CL:0002194!5.88e-15!63;CL:0000576!5.88e-15!63;CL:0000040!5.88e-15!63;CL:0000559!5.88e-15!63;CL:0000838!6.85e-15!52;CL:0000557!1.52e-14!71;CL:0000542!1.87e-14!53;CL:0000051!1.87e-14!53;CL:0000990!8.83e-14!8;CL:0000766!8.43e-13!76;CL:0000839!1.42e-12!70;CL:0000763!8.08e-12!112;CL:0000049!8.08e-12!112;CL:0000080!1.19e-09!6;CL:0000453!3.73e-09!5;CL:0000840!4.98e-09!5;CL:0001029!4.98e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.01e-56;13!CL:0000945;2.75e-29;24!CL:0000451;2.70e-20;10!CL:0000784;7.41e-20;3!CL:0000542;2.06e-12;53!CL:0000453;6.00e-12;5!CL:0000990;1.69e-11;8 | |ontology_enrichment_celltype_v019=CL:0000236;9.01e-56;13!CL:0000945;2.75e-29;24!CL:0000451;2.70e-20;10!CL:0000784;7.41e-20;3!CL:0000542;2.06e-12;53!CL:0000453;6.00e-12;5!CL:0000990;1.69e-11;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.10e-52,14;CL:0000945,1.87e-29,24;CL:0000826,1.87e-29,24;CL:0000451,2.61e-20,10;CL:0000784,6.97e-20,3;CL:0000838,5.93e-15,52;CL:0000542,1.26e-14,53;CL:0000051,1.26e-14,53;CL:0000738,5.80e-14,136;CL:0000453,6.00e-12,5;CL:0000037,7.77e-12,168;CL:0000990,1.69e-11,8;CL:0000988,5.11e-11,177;CL:0002032,7.95e-10,161;CL:0000837,7.95e-10,161;CL:0002087,6.49e-09,115;CL:0002031,2.01e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.06e-12;53!UBERON:0004872;3.62e-08;7!UBERON:0001045;3.61e-07;1!UBERON:0005425;3.61e-07;1 | |ontology_enrichment_development_v019=CL:0000051;2.06e-12;53!UBERON:0004872;3.62e-08;7!UBERON:0001045;3.61e-07;1!UBERON:0005425;3.61e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.35e-23!102;UBERON:0003061!2.35e-23!102;UBERON:0002193!1.87e-22!112;UBERON:0002371!9.19e-13!80;UBERON:0002405!2.41e-11!115;UBERON:0001474!3.25e-11!86;UBERON:0007023!1.16e-10!115;UBERON:0000178!3.21e-09!15;UBERON:0000179!3.21e-09!15;UBERON:0000463!3.21e-09!15;UBERON:0004765!7.38e-09!101;UBERON:0001434!7.38e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!2.35e-23!102;UBERON:0003061!2.35e-23!102;UBERON:0002193!1.87e-22!112;UBERON:0002371!9.19e-13!80;UBERON:0002405!2.41e-11!115;UBERON:0001474!3.25e-11!86;UBERON:0007023!1.16e-10!115;UBERON:0000178!3.21e-09!15;UBERON:0000179!3.21e-09!15;UBERON:0000463!3.21e-09!15;UBERON:0004765!7.38e-09!101;UBERON:0001434!7.38e-09!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.65e-09;3!UBERON:0002372;2.07e-07;1!UBERON:0000029;2.07e-07;1!UBERON:0001961;2.07e-07;1!UBERON:0001744;2.07e-07;1!UBERON:0001042;2.07e-07;1!UBERON:0001735;2.07e-07;1!UBERON:0001154;3.61e-07;1!UBERON:0000941;3.61e-07;1!UBERON:0001153;3.61e-07;1!UBERON:0001785;3.61e-07;1!UBERON:0002464;3.61e-07;1!UBERON:0004904;3.61e-07;1!UBERON:0009854;3.61e-07;1!UBERON:0001021;3.61e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002106;9.65e-09;3!UBERON:0002372;2.07e-07;1!UBERON:0000029;2.07e-07;1!UBERON:0001961;2.07e-07;1!UBERON:0001744;2.07e-07;1!UBERON:0001042;2.07e-07;1!UBERON:0001735;2.07e-07;1!UBERON:0001154;3.61e-07;1!UBERON:0000941;3.61e-07;1!UBERON:0001153;3.61e-07;1!UBERON:0001785;3.61e-07;1!UBERON:0002464;3.61e-07;1!UBERON:0004904;3.61e-07;1!UBERON:0009854;3.61e-07;1!UBERON:0001021;3.61e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.92e-09,3;UBERON:0004854,8.92e-09,3;UBERON:0009034,8.92e-09,3;UBERON:0002095,8.92e-09,3;UBERON:0004782,8.92e-09,3;UBERON:0003281,8.92e-09,3;UBERON:0009664,8.92e-09,3;UBERON:0002296,8.92e-09,3;UBERON:0005602,8.92e-09,3;UBERON:0001179,8.92e-09,3;UBERON:0006293,8.92e-09,3;UBERON:0002372,2.07e-07,1;UBERON:0001961,2.07e-07,1;UBERON:0001744,2.07e-07,1;UBERON:0001735,2.07e-07,1;UBERON:0000029,2.21e-07,1;UBERON:0000941,3.20e-07,1;UBERON:0001785,3.20e-07,1;UBERON:0002464,3.20e-07,1;UBERON:0004904,3.20e-07,1;UBERON:0001021,3.20e-07,1;UBERON:0003902,3.20e-07,1;UBERON:0005425,3.20e-07,1;UBERON:0001154,3.84e-07,1;UBERON:0001153,3.84e-07,1;UBERON:0001045,3.84e-07,1 | |||
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| ||
|short_description=p1@HLA-DPB2 | |short_description=p1@HLA-DPB2 | ||
}} | }} |
Revision as of 16:40, 15 November 2012
Short description: | p1@HLA-DPB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HLA-DPB2_5end |
Coexpression cluster: | C1215_migratory_CD19_adult_immature_Dendritic_Burkitt_vein |
Association with transcript: | 0bp_to_ENST00000435074_5end |
EntrezGene: | NA |
HGNC: | 4941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.10e-52 | 14 |
lymphocyte of B lineage | 1.87e-29 | 24 |
pro-B cell | 1.87e-29 | 24 |
dendritic cell | 2.61e-20 | 10 |
plasmacytoid dendritic cell | 6.97e-20 | 3 |
lymphoid lineage restricted progenitor cell | 5.93e-15 | 52 |
lymphocyte | 1.26e-14 | 53 |
common lymphoid progenitor | 1.26e-14 | 53 |
leukocyte | 5.80e-14 | 136 |
Langerhans cell | 6.00e-12 | 5 |
hematopoietic stem cell | 7.77e-12 | 168 |
conventional dendritic cell | 1.69e-11 | 8 |
hematopoietic cell | 5.11e-11 | 177 |
hematopoietic oligopotent progenitor cell | 7.95e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.95e-10 | 161 |
nongranular leukocyte | 6.49e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.01e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.92e-09 | 3 |
gastrointestinal system mesentery | 8.92e-09 | 3 |
stomach region | 8.92e-09 | 3 |
mesentery | 8.92e-09 | 3 |
gastrointestinal system serosa | 8.92e-09 | 3 |
mesentery of stomach | 8.92e-09 | 3 |
gut mesentery | 8.92e-09 | 3 |
dorsal mesentery | 8.92e-09 | 3 |
dorsal mesogastrium | 8.92e-09 | 3 |
peritoneal cavity | 8.92e-09 | 3 |
spleen primordium | 8.92e-09 | 3 |
tonsil | 2.07e-07 | 1 |
mucosa-associated lymphoid tissue | 2.07e-07 | 1 |
lymphoid tissue | 2.07e-07 | 1 |
tonsillar ring | 2.07e-07 | 1 |
lymph node | 2.21e-07 | 1 |
cranial nerve II | 3.20e-07 | 1 |
cranial nerve | 3.20e-07 | 1 |
nerve trunk | 3.20e-07 | 1 |
nerve connecting eye with brain | 3.20e-07 | 1 |
nerve | 3.20e-07 | 1 |
retinal neural layer | 3.20e-07 | 1 |
presumptive neural retina | 3.20e-07 | 1 |
vermiform appendix | 3.84e-07 | 1 |
caecum | 3.84e-07 | 1 |
midgut | 3.84e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.