Personal tools

UBERON:0001694: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0001694
|alt_id=UBERON:FMA_52871-MA_0001477
|name=petrous part of temporal bone
|namespace=
|def="The temporal bones are situated at the sides and base of the skull. The temporal bone supports that part of the face known as the temple. [WP,unvetted]." [Wikipedia:Petrous_bone]
|xref=EHDAA2:0001452;;EMAPA:17683;;FMA:52871;;GAID:234;;http://upload.wikimedia.org/wikipedia/commons/thumb/9/96/Gray137.png/200px-Gray137.png;;MA:0001477;;MESH:A.02.835.232.781.885.681;;ncithesaurus:Ciliary_Process;;SCTID:361733004
|is_a=UBERON:0005913
|synonym="pars petrosa (os temporale)" EXACT [FMA:52871];;"pars petrosa ossis temporalis" EXACT [];;"petromastoid part of temporal bone" EXACT [FMA:52871];;"petrosal bone" EXACT [FMA:52871];;"petrous bone" EXACT [FMA:52871];;"temporal bone petrous part" EXACT []
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_52871-MA_0001477
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The temporal bones are situated at the sides and base of the skull. The temporal bone supports that part of the face known as the temple. [WP,unvetted]." [Wikipedia:Petrous_bone]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001694
|is_a=UBERON:0004120 ;;UBERON:0005913 ;;UBERON:0010313
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0001678
|name=petrous part of temporal bone
|namespace=
|obo_creation_date=
|part_of=UBERON:0001678;;UBERON:0002517
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="pars petrosa (os temporale)" EXACT [FMA:52871];;"pars petrosa ossis temporalis" EXACT [];;"petromastoid part of temporal bone" EXACT [FMA:52871];;"petrosal bone" EXACT [FMA:52871];;"petrous bone" EXACT [FMA:52871];;"temporal bone petrous part" EXACT []
|union_of=
|xref=EHDAA2:0001452;;EMAPA:17683;;FMA:52871;;GAID:234;;http://upload.wikimedia.org/wikipedia/commons/thumb/9/96/Gray137.png/200px-Gray137.png;;MA:0001477;;MESH:A.02.835.232.781.885.681;;ncithesaurus:Ciliary_Process;;SCTID:361733004
}}
}}

Revision as of 11:04, 12 September 2014

Name:petrous part of temporal bone
Definition:"The temporal bones are situated at the sides and base of the skull. The temporal bone supports that part of the face known as the temple. [WP,unvetted]." [Wikipedia:Petrous_bone]
Xrefs:
links:

EHDAA2:0001452
EMAPA:17683
FMA:52871
GAID:234
[ 200px-Gray137.png 200px-Gray137.png]
MA:0001477
MESH:A.02.835.232.781.885.681
ncithesaurus:Ciliary_Process

SCTID:361733004
Synonyms: "pars petrosa (os temporale)" EXACT [FMA:52871]
"pars petrosa ossis temporalis" EXACT []
"petromastoid part of temporal bone" EXACT [FMA:52871]
"petrosal bone" EXACT [FMA:52871]
"petrous bone" EXACT [FMA:52871]
"temporal bone petrous part" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_52871-MA_0001477
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005913(zone of bone organ),UBERON:0010313(neural crest-derived structure)
part_of:UBERON:0001678(temporal bone),UBERON:0002517(basicranium)



Children

part of:UBERON:0001839 (bony labyrinth),UBERON:0004637 (otic capsule)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001694 (petrous part of temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p9@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Fanca
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Dytn
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Strc
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:150945209..150945220, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001694&oldid=3273943"