CL:1000615: Difference between revisions
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 13:05, 27 June 2012
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002584(renal cortical epithelial cell),CL:1000494(nephron tubule epithelial cell) |
|---|---|
| part_of: | UBERON:0006853(renal cortex tubule) |
Children
| is a: | CL:0002306 (epithelial cell of proximal tubule) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
Mouse (Mus musculus)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000615 (kidney cortex tubule cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.98e-131 | FFCP PHASE1:Hg19::chr5:167718782..167718785,+#_4f9089971ebe98d3ccea464038c370df | p10@WWC1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr5:167718782..167718785,+#_4f9089971ebe98d3ccea464038c370df | p10@WWC1 |
| 1.01e-74 | FFCP PHASE1:Hg19::chr3:149260147..149260154,-#_1464558e6c6edf07ee65720edc8c53c2 | p39@WWTR1 |
| 1.01e-74 | FFCP PHASE2:Hg19::chr3:149260147..149260154,-#_1464558e6c6edf07ee65720edc8c53c2 | p39@WWTR1 |
| 1.24e-73 | FFCP PHASE2:Hg19::chr17:46679250..46679298,+#_f9a567f867ae1b41578bcb3a798da640 | p1@ENST00000491264 |
| 1.24e-73 | FFCP PHASE1:Hg19::chr17:46679250..46679298,+#_f9a567f867ae1b41578bcb3a798da640 | p1@ENST00000491264 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr16:62055187..62055188,+#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr16:62055187..62055188, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr16:61687533..61687551,-#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr16:61687533..61687551, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:123667850..123667851,+#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr3:123667850..123667851, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr16:62055187..62055188,+#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr16:62055187..62055188, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:6614884..6614885,+#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr8:6614884..6614885, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:123667850..123667851,+#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr3:123667850..123667851, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr16:61687533..61687551,-#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr16:61687533..61687551, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:6614884..6614885,+#_4000f9304d9d68dd7dbb18ae55c029d1 | p@chr8:6614884..6614885, + |
| 1.22e-59 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_dfa58ecf64541c0644d64e0136fe5fb9 | p4@MEGF11 |
| 1.22e-59 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_dfa58ecf64541c0644d64e0136fe5fb9 | p4@MEGF11 |
| 3.75e-53 | FFCP PHASE2:Hg19::chr9:114828174..114828179,+#_58fec75ba60c0102a397095a3850805e | p@chr9:114828174..114828179, + |
| 3.75e-53 | FFCP PHASE1:Hg19::chr9:114828174..114828179,+#_58fec75ba60c0102a397095a3850805e | p@chr9:114828174..114828179, + |
| 1.65e-46 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_2ee39d216074db9e1a8f09b1b28e9948 | p@chr7:140227349..140227360, - |
| 1.65e-46 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_2ee39d216074db9e1a8f09b1b28e9948 | p@chr7:140227349..140227360, - |
| 7.81e-45 | FFCP PHASE2:Hg19::chr6:30890373..30890381,+#_090106d0d1c866296db0fd609b5883a7 | p9@VARS2 |
| 7.81e-45 | FFCP PHASE1:Hg19::chr6:30890373..30890381,+#_090106d0d1c866296db0fd609b5883a7 | p9@VARS2 |
| 6.91e-39 | FFCP PHASE1:Hg19::chr6:30890456..30890482,+#_fdd945534a6f3f4d293b70b4a43f29c9 | p11@VARS2 |
| 6.91e-39 | FFCP PHASE2:Hg19::chr6:30890456..30890482,+#_fdd945534a6f3f4d293b70b4a43f29c9 | p11@VARS2 |
| 1.49e-38 | FFCP PHASE2:Hg19::chr11:33718564..33718585,-#_88d6a1b9d52296e5842a2f0c043e6f87 | p1@ENST00000534431 |
| 1.49e-38 | FFCP PHASE1:Hg19::chr11:33718564..33718585,-#_88d6a1b9d52296e5842a2f0c043e6f87 | p1@ENST00000534431 |
| 2.64e-38 | FFCP PHASE1:Hg19::chr7:53466339..53466356,-#_e4de1ec1a933ea527c7efaca66411b6d | p@chr7:53466339..53466356, - |
| 2.64e-38 | FFCP PHASE2:Hg19::chr7:53466339..53466356,-#_e4de1ec1a933ea527c7efaca66411b6d | p@chr7:53466339..53466356, - |
| 3.48e-38 | FFCP PHASE1:Hg19::chr17:18160552..18160565,-#_87402dd5b76a8c17bbf428c0204f4aa3 | p@chr17:18160552..18160565, - |
| 3.48e-38 | FFCP PHASE2:Hg19::chr17:18160552..18160565,-#_87402dd5b76a8c17bbf428c0204f4aa3 | p@chr17:18160552..18160565, - |
| 3.86e-38 | FFCP PHASE1:Hg19::chr3:190105820..190105829,+#_518ea1c4b4ed65321c35233153fdc82a | p3@CLDN16 |
| 3.86e-38 | FFCP PHASE2:Hg19::chr3:190105820..190105829,+#_518ea1c4b4ed65321c35233153fdc82a | p3@CLDN16 |
| 5.76e-38 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_34b4ca5a1b4e83ac44b494f145916ae4 | p@chr1:1100457..1100470, + |
| 5.76e-38 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_34b4ca5a1b4e83ac44b494f145916ae4 | p@chr1:1100457..1100470, + |
| 2.08e-36 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_d7949e698682b4217d68bb0d211f03e3 | p4@AIF1L |
| 2.08e-36 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_d7949e698682b4217d68bb0d211f03e3 | p4@AIF1L |
| 2.25e-35 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_c63f74d2c4828e005013ebf222da030b | p4@PAX2 |
| 2.25e-35 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_c63f74d2c4828e005013ebf222da030b | p4@PAX2 |
| 3.2e-35 | FFCP PHASE1:Hg19::chr12:6485243..6485254,-#_8bf98f3a84f6988f988bb0a555151b05 | p18@SCNN1A |
| 3.2e-35 | FFCP PHASE2:Hg19::chr12:6485243..6485254,-#_8bf98f3a84f6988f988bb0a555151b05 | p18@SCNN1A |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:31023284..31023287,-#_e90e463fdf1be87377d3a003c93a52dd | p@chr6:31023284..31023287, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:31023284..31023287,-#_e90e463fdf1be87377d3a003c93a52dd | p@chr6:31023284..31023287, - |
| 2.09e-33 | FFCP PHASE1:Hg19::chr2:113994209..113994222,-#_d0785723cdd4bc18b04c4d0623948f10 | p11@PAX8 |
| 2.09e-33 | FFCP PHASE2:Hg19::chr2:113994209..113994222,-#_d0785723cdd4bc18b04c4d0623948f10 | p11@PAX8 |
| 1.41e-32 | FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_2e387f7be31cbeff1585687f1e6a6537 | p2@C14orf105 |
| 1.41e-32 | FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_2e387f7be31cbeff1585687f1e6a6537 | p2@C14orf105 |
| 2.17e-32 | FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_29136dbf97ef61fcaf0bf9ceb14fedb7 | p1@CLDN16 |
| 2.17e-32 | FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_29136dbf97ef61fcaf0bf9ceb14fedb7 | p1@CLDN16 |
| 3.1e-30 | FFCP PHASE1:Hg19::chr3:112127710..112127713,-#_2ef3985f40ab26b8c134451a7e475f5b | p@chr3:112127710..112127713, - |
| 3.1e-30 | FFCP PHASE2:Hg19::chr3:112127710..112127713,-#_2ef3985f40ab26b8c134451a7e475f5b | p@chr3:112127710..112127713, - |
| 4.84e-30 | FFCP PHASE2:Hg19::chr20:49347516..49347535,-#_6ea9ead7dbc967333a7f573497850606 | p@chr20:49347516..49347535, - |
| 4.84e-30 | FFCP PHASE1:Hg19::chr20:49347516..49347535,-#_6ea9ead7dbc967333a7f573497850606 | p@chr20:49347516..49347535, - |
| 6.17e-30 | FFCP PHASE2:Hg19::chr6:30890348..30890372,+#_31153269679a6dcf514e1fb64d1269ac | p5@VARS2 |
| 6.17e-30 | FFCP PHASE1:Hg19::chr6:30890348..30890372,+#_31153269679a6dcf514e1fb64d1269ac | p5@VARS2 |
| 8.26e-30 | FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_cafe7a183f9ee68399d6bce1c9ff1fd7 | p3@AIF1L |
| 8.26e-30 | FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_cafe7a183f9ee68399d6bce1c9ff1fd7 | p3@AIF1L |
| 8.74e-30 | FFCP PHASE2:Hg19::chr3:190106002..190106011,+#_41085775eded5cb991838355b63bf11b | p4@CLDN16 |
| 8.74e-30 | FFCP PHASE1:Hg19::chr3:190106002..190106011,+#_41085775eded5cb991838355b63bf11b | p4@CLDN16 |
| 4.28e-29 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_c109e7706e291bc75773766a76ad1f49 | p@chr7:7606139..7606151, - |
| 4.28e-29 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_c109e7706e291bc75773766a76ad1f49 | p@chr7:7606139..7606151, - |
| 5.09e-29 | FFCP PHASE1:Hg19::chr6:30890599..30890626,+#_34108eceba271bc7ca8c7deea2324838 | p4@VARS2 |
| 5.09e-29 | FFCP PHASE2:Hg19::chr6:30890599..30890626,+#_34108eceba271bc7ca8c7deea2324838 | p4@VARS2 |
| 4.74e-28 | FFCP PHASE2:Hg19::chr11:117695245..117695263,-#_e0457a78530ee0930a68989122e38da5 | p7@FXYD2 |
| 4.74e-28 | FFCP PHASE1:Hg19::chr11:117695245..117695263,-#_e0457a78530ee0930a68989122e38da5 | p7@FXYD2 |
| 2.38e-27 | FFCP PHASE2:Hg19::chr11:117695233..117695244,-#_53aa78a0659b15075595852f5b07d906 | p11@FXYD2 |
| 2.38e-27 | FFCP PHASE1:Hg19::chr11:117695233..117695244,-#_53aa78a0659b15075595852f5b07d906 | p11@FXYD2 |
| 3.11e-27 | FFCP PHASE2:Hg19::chr10:91043499..91043510,+#_226dba6e993da56fbc59d597d1981b00 | p2@ENST00000354541 |
| 3.11e-27 | FFCP PHASE1:Hg19::chr10:91043499..91043510,+#_226dba6e993da56fbc59d597d1981b00 | p2@ENST00000354541 |
| 5.07e-27 | FFCP PHASE1:Hg19::chr1:17519128..17519138,+#_bbcac0687c764d3dcf368924fa765e62 | p@chr1:17519128..17519138, + |
| 5.07e-27 | FFCP PHASE2:Hg19::chr1:17519128..17519138,+#_bbcac0687c764d3dcf368924fa765e62 | p@chr1:17519128..17519138, + |
| 1.22e-26 | FFCP PHASE2:Hg19::chr18:77104123..77104150,+#_d69f3f05ce8945e41c68a4d89bc82e14 | p5@ATP9B |
| 1.22e-26 | FFCP PHASE1:Hg19::chr18:77104123..77104150,+#_d69f3f05ce8945e41c68a4d89bc82e14 | p5@ATP9B |
| 2.01e-25 | FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_f806f43f3fe74e787162181de9cd05fe | p@chr7:98453821..98453843, - |
| 2.01e-25 | FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_f806f43f3fe74e787162181de9cd05fe | p@chr7:98453821..98453843, - |
| 4.31e-25 | FFCP PHASE1:Hg19::chr2:167467988..167467993,-#_b55a8a66407467ae14613a5b3d7d1739 | p@chr2:167467988..167467993, - |
| 4.31e-25 | FFCP PHASE1:Hg19::chr9:133986740..133986750,+#_b55a8a66407467ae14613a5b3d7d1739 | p7@AIF1L |
| 4.31e-25 | FFCP PHASE2:Hg19::chr2:167467988..167467993,-#_b55a8a66407467ae14613a5b3d7d1739 | p@chr2:167467988..167467993, - |
| 4.31e-25 | FFCP PHASE2:Hg19::chr9:133986740..133986750,+#_b55a8a66407467ae14613a5b3d7d1739 | p7@AIF1L |
| 5.5e-25 | FFCP PHASE2:Hg19::chr2:189157368..189157381,-#_30e557dc5f28de5711b0210aba2a867c | p@chr2:189157368..189157381, - |
| 5.5e-25 | FFCP PHASE1:Hg19::chr2:189157368..189157381,-#_30e557dc5f28de5711b0210aba2a867c | p@chr2:189157368..189157381, - |
| 7.93e-25 | FFCP PHASE2:Hg19::chr9:119741711..119741743,-#_31248464a0bd9c9f07627832796a80e7 | p@chr9:119741711..119741743, - |
| 7.93e-25 | FFCP PHASE1:Hg19::chr9:119741711..119741743,-#_31248464a0bd9c9f07627832796a80e7 | p@chr9:119741711..119741743, - |
| 8.07e-25 | FFCP PHASE1:Hg19::chr19:51472081..51472088,-#_e53a7c6c647a318b428cecbdcee1ec66 | p8@KLK6 |
| 8.07e-25 | FFCP PHASE2:Hg19::chr19:51472081..51472088,-#_e53a7c6c647a318b428cecbdcee1ec66 | p8@KLK6 |
| 1.21e-24 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_97759badb184e1f6da1a9697ad22fb77 | p7@HOXA10 |
| 1.21e-24 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_97759badb184e1f6da1a9697ad22fb77 | p7@HOXA10 |
| 1.29e-24 | FFCP PHASE1:Hg19::chr20:6034241..6034256,-#_6e83f22dcc2f52acede901ef36a85ea4 | p@chr20:6034241..6034256, - |
| 1.29e-24 | FFCP PHASE2:Hg19::chr20:6034241..6034256,-#_6e83f22dcc2f52acede901ef36a85ea4 | p@chr20:6034241..6034256, - |
| 7.91e-24 | FFCP PHASE2:Hg19::chr11:117695415..117695426,-#_858a5c6c4771166770b5c6f3688425bd | p3@FXYD2 |
| 7.91e-24 | FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_858a5c6c4771166770b5c6f3688425bd | p2@B3GALT5 |
| 7.91e-24 | FFCP PHASE1:Hg19::chr11:117695415..117695426,-#_858a5c6c4771166770b5c6f3688425bd | p3@FXYD2 |
| 7.91e-24 | FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_858a5c6c4771166770b5c6f3688425bd | p2@B3GALT5 |
| 9.99e-24 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_f1322137b73c1928163000b9de713c81 | p@chr18:3456189..3456200, + |
| 9.99e-24 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_f1322137b73c1928163000b9de713c81 | p@chr18:3456189..3456200, + |
| 9.99e-24 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_f1322137b73c1928163000b9de713c81 | p3@PAX2 |
| 9.99e-24 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_f1322137b73c1928163000b9de713c81 | p3@PAX2 |
| 3.27e-23 | FFCP PHASE2:Hg19::chr12:6484832..6484841,+#_6ba6af83715037ccd51bd9a907acc5f1 | p@chr12:6484832..6484841, + |
| 3.27e-23 | FFCP PHASE1:Hg19::chr12:6484832..6484841,+#_6ba6af83715037ccd51bd9a907acc5f1 | p@chr12:6484832..6484841, + |
| 3.29e-23 | FFCP PHASE1:Hg19::chr3:43532224..43532252,-#_345c057d07346cfd5145fe0a9af5c2ac | p@chr3:43532224..43532252, - |
| 3.29e-23 | FFCP PHASE2:Hg19::chr3:43532224..43532252,-#_345c057d07346cfd5145fe0a9af5c2ac | p@chr3:43532224..43532252, - |
