CL:1000306: Difference between revisions
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|part_of= | |part_of=UBERON:0005734 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 13:05, 27 June 2012
| Name: | fibroblast of tunica adventitia of artery | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "A fibroblast that is part of the tunica adventitia of artery." [GOC:tfm] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast) |
|---|---|
| part_of: | UBERON:0005734(tunica adventitia of blood vessel) |
Children
| is a: | CL:0002547 (fibroblast of the aortic adventitia) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11326-117E3 (Fibroblast - Aortic Adventitial, donor2)
- 11401-118D6 (Fibroblast - Aortic Adventitial, donor3)
- 14309-155C7
- 14310-155C8 (Fibroblast - Aortic Adventitial donor3 (cytoplasmic fraction))
- 14311-155C9 (Fibroblast - Aortic Adventitial, donor3 (nuclear fraction))
- 14330-155F1
- 14331-155F2 (Fibroblast - Aortic Adventitial donor2 (cytoplasmic fraction))
- 14332-155F3 (Fibroblast - Aortic Adventitial, donor2 (nuclear fraction))
Mouse (Mus musculus)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11326-117E3 (Fibroblast - Aortic Adventitial, donor2)
- 11401-118D6 (Fibroblast - Aortic Adventitial, donor3)
- 14309-155C7
- 14310-155C8 (Fibroblast - Aortic Adventitial donor3 (cytoplasmic fraction))
- 14311-155C9 (Fibroblast - Aortic Adventitial, donor3 (nuclear fraction))
- 14330-155F1
- 14331-155F2 (Fibroblast - Aortic Adventitial donor2 (cytoplasmic fraction))
- 14332-155F3 (Fibroblast - Aortic Adventitial, donor2 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000306 (fibroblast of tunica adventitia of artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.01e-74 | FFCP PHASE1:Hg19::chr4:67298860..67298867,-#_836bfe63bd71a803058b0435986d51ab | p@chr4:67298860..67298867, - |
| 2.01e-74 | FFCP PHASE2:Hg19::chr4:67298860..67298867,-#_836bfe63bd71a803058b0435986d51ab | p@chr4:67298860..67298867, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_ac52eed586e33e4be72a076e84dfdf99 | p@chr7:22687639..22687644, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr5:93904635..93904644,+#_ac52eed586e33e4be72a076e84dfdf99 | p@chr5:93904635..93904644, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr5:93904635..93904644,+#_ac52eed586e33e4be72a076e84dfdf99 | p@chr5:93904635..93904644, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_ac52eed586e33e4be72a076e84dfdf99 | p@chr7:22687639..22687644, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr11:29207409..29207435,+#_1e1b7d69030249d6158ca520dbe7e3b9 | p@chr11:29207409..29207435, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr11:29207409..29207435,+#_1e1b7d69030249d6158ca520dbe7e3b9 | p@chr11:29207409..29207435, + |
| 5.94e-56 | FFCP PHASE1:Hg19::chr3:46607836..46607847,-#_04081fe2e4b460f0d8b02c8a90d33c40 | p5@LRRC2 |
| 5.94e-56 | FFCP PHASE2:Hg19::chr3:46607836..46607847,-#_04081fe2e4b460f0d8b02c8a90d33c40 | p5@LRRC2 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:55327810..55327812,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:55327810..55327812, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:199267284..199267291,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr1:199267284..199267291, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:47835322..47835327,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr7:47835322..47835327, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:118413835..118413843,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr9:118413835..118413843, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:84979566..84979573,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr13:84979566..84979573, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:76108116..76108123,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr12:76108116..76108123, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:151537893..151537898,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:151537893..151537898, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:98699947..98699957,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr3:98699947..98699957, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:32133423..32133424,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr7:32133423..32133424, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:62679110..62679113,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr17:62679110..62679113, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:219498496..219498503,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr1:219498496..219498503, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:84979566..84979573,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr13:84979566..84979573, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:84807360..84807364,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr7:84807360..84807364, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:36796505..36796529,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr11:36796505..36796529, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:68614207..68614210,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr14:68614207..68614210, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:226851965..226851967,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr1:226851965..226851967, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:140070083..140070090,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr6:140070083..140070090, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:216588131..216588134,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:216588131..216588134, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:10349108..10349113,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr11:10349108..10349113, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:140070083..140070090,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr6:140070083..140070090, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:76175230..76175237,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr12:76175230..76175237, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:77703570..77703577,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr4:77703570..77703577, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:32133423..32133424,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr7:32133423..32133424, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:62679110..62679113,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr17:62679110..62679113, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:54248451..54248453,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr10:54248451..54248453, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:84807360..84807364,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr7:84807360..84807364, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:77703570..77703577,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr4:77703570..77703577, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:23158454..23158473,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr14:23158454..23158473, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:29331768..29331769,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr11:29331768..29331769, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:226851965..226851967,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr1:226851965..226851967, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:23158454..23158473,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr14:23158454..23158473, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:163602194..163602199,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr5:163602194..163602199, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:37772283..37772287,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr5:37772283..37772287, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:76108116..76108123,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr12:76108116..76108123, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:156878186..156878199,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p71@CCNL1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:141105574..141105581,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr3:141105574..141105581, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:43584268..43584275,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr19:43584268..43584275, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:123376383..123376386,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr8:123376383..123376386, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:18807662..18807665,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:18807662..18807665, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:36796505..36796529,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr11:36796505..36796529, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:43584268..43584275,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr19:43584268..43584275, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:18807662..18807665,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:18807662..18807665, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:163602194..163602199,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr5:163602194..163602199, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:10349108..10349113,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr11:10349108..10349113, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:129522281..129522284,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr8:129522281..129522284, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:14109718..14109721,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr5:14109718..14109721, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:28955184..28955188,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr21:28955184..28955188, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:76175230..76175237,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr12:76175230..76175237, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:37772283..37772287,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr5:37772283..37772287, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:162943708..162943739,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:162943708..162943739, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:156878186..156878199,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p71@CCNL1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:107870700..107870705,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr8:107870700..107870705, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:54248451..54248453,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr10:54248451..54248453, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:141105574..141105581,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr3:141105574..141105581, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:29800057..29800074,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr3:29800057..29800074, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:57128349..57128352,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr6:57128349..57128352, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:162943708..162943739,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:162943708..162943739, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:47835322..47835327,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr7:47835322..47835327, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:123376383..123376386,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr8:123376383..123376386, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:55327810..55327812,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:55327810..55327812, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:199267284..199267291,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr1:199267284..199267291, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:98699947..98699957,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr3:98699947..98699957, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:57128349..57128352,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr6:57128349..57128352, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:219498496..219498503,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr1:219498496..219498503, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:129522281..129522284,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr8:129522281..129522284, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:14109718..14109721,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr5:14109718..14109721, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:28955184..28955188,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr21:28955184..28955188, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:29331768..29331769,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr11:29331768..29331769, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:216588131..216588134,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:216588131..216588134, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:118413835..118413843,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr9:118413835..118413843, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:107870700..107870705,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr8:107870700..107870705, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:68614207..68614210,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr14:68614207..68614210, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:151537893..151537898,-#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr2:151537893..151537898, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:29800057..29800074,+#_de2bb00d3b31915a14ad0fbc5b68f80a | p@chr3:29800057..29800074, + |
| 5.14e-50 | FFCP PHASE1:Hg19::chr2:72789203..72789224,-#_6ef6a3312ab118b4889565ee48fc789d | p@chr2:72789203..72789224, - |
| 5.14e-50 | FFCP PHASE2:Hg19::chr2:72789203..72789224,-#_6ef6a3312ab118b4889565ee48fc789d | p@chr2:72789203..72789224, - |
| 5.14e-50 | FFCP PHASE1:Hg19::chr6:136397717..136397720,-#_6ef6a3312ab118b4889565ee48fc789d | p@chr6:136397717..136397720, - |
| 5.14e-50 | FFCP PHASE2:Hg19::chr6:136397717..136397720,-#_6ef6a3312ab118b4889565ee48fc789d | p@chr6:136397717..136397720, - |
| 2.53e-41 | FFCP PHASE2:Hg19::chr9:13707925..13707941,+#_24016d1c4903eb6c082a664a8e53f83f | p@chr9:13707925..13707941, + |
| 2.53e-41 | FFCP PHASE1:Hg19::chr9:13707925..13707941,+#_24016d1c4903eb6c082a664a8e53f83f | p@chr9:13707925..13707941, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr3:170459091..170459101,-#_08a98ed8e683b9c2be998c30c1a1d3f2 | p4@ENST00000473110 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr3:170459091..170459101,-#_08a98ed8e683b9c2be998c30c1a1d3f2 | p4@ENST00000473110 |
| 1.81e-40 | FFCP PHASE2:Hg19::chr11:28779555..28779601,+#_7aa3f0dd4305e92def3343dd71e1d881 | p@chr11:28779555..28779601, + |
| 1.81e-40 | FFCP PHASE1:Hg19::chr11:28779555..28779601,+#_7aa3f0dd4305e92def3343dd71e1d881 | p@chr11:28779555..28779601, + |
| 2.22e-40 | FFCP PHASE1:Hg19::chr1:238811500..238811513,+#_4f7a31d299b57decf2ed5397a9b71a50 | p@chr1:238811500..238811513, + |
| 2.22e-40 | FFCP PHASE1:Hg19::chr8:11373722..11373763,+#_4f7a31d299b57decf2ed5397a9b71a50 | p@chr8:11373722..11373763, + |
| 2.22e-40 | FFCP PHASE2:Hg19::chr1:238811500..238811513,+#_4f7a31d299b57decf2ed5397a9b71a50 | p@chr1:238811500..238811513, + |
| 2.22e-40 | FFCP PHASE2:Hg19::chr8:11373722..11373763,+#_4f7a31d299b57decf2ed5397a9b71a50 | p@chr8:11373722..11373763, + |
| 2.22e-40 | FFCP PHASE1:Hg19::chr8:120063756..120063761,-#_4f7a31d299b57decf2ed5397a9b71a50 | p@chr8:120063756..120063761, - |
| 2.22e-40 | FFCP PHASE2:Hg19::chr8:120063756..120063761,-#_4f7a31d299b57decf2ed5397a9b71a50 | p@chr8:120063756..120063761, - |
