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{{CL
{{CL
|id=CL:0000240
|alt_id=
|name=stratified squamous epithelial cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000076;;CL:0000079
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000240
|is_a=CL:0000076 ;;CL:0000079
|is_obsolete=
|located_in=
|located_in=
|name=stratified squamous epithelial cell
|namespace=cell
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:16, 12 September 2014

Name:stratified squamous epithelial cell
Namespace:cell


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000076(squamous epithelial cell),CL:0000079(stratified epithelial cell)



Children


is a:CL:0000237 (keratinizing barrier epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000240 (stratified squamous epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-66FFCP PHASE1:Hg19::chr22:27043104..27043111,+#_306c33e64c7e48b353e26270eda89e59p27@MIAT
2.83e-66FFCP PHASE1:Hg19::chr1:216595350..216595395,-#_306c33e64c7e48b353e26270eda89e59p@chr1:216595350..216595395, -
2.83e-66FFCP PHASE2:Hg19::chr5:64369097..64369105,+#_306c33e64c7e48b353e26270eda89e59p@chr5:64369097..64369105, +
2.83e-66FFCP PHASE1:Hg19::chr15:46610897..46610904,+#_306c33e64c7e48b353e26270eda89e59p@chr15:46610897..46610904, +
2.83e-66FFCP PHASE1:Hg19::chr1:242843433..242843446,-#_306c33e64c7e48b353e26270eda89e59p@chr1:242843433..242843446, -
2.83e-66FFCP PHASE2:Hg19::chr22:27043104..27043111,+#_306c33e64c7e48b353e26270eda89e59p27@MIAT
2.83e-66FFCP PHASE2:Hg19::chr1:216595350..216595395,-#_306c33e64c7e48b353e26270eda89e59p@chr1:216595350..216595395, -
2.83e-66FFCP PHASE1:Hg19::chr3:66452082..66452087,-#_306c33e64c7e48b353e26270eda89e59p@chr3:66452082..66452087, -
2.83e-66FFCP PHASE2:Hg19::chr1:242843433..242843446,-#_306c33e64c7e48b353e26270eda89e59p@chr1:242843433..242843446, -
2.83e-66FFCP PHASE2:Hg19::chr3:66452082..66452087,-#_306c33e64c7e48b353e26270eda89e59p@chr3:66452082..66452087, -
2.83e-66FFCP PHASE1:Hg19::chr15:46610951..46610964,+#_306c33e64c7e48b353e26270eda89e59p@chr15:46610951..46610964, +
2.83e-66FFCP PHASE1:Hg19::chr4:6356121..6356152,-#_306c33e64c7e48b353e26270eda89e59p@chr4:6356121..6356152, -
2.83e-66FFCP PHASE1:Hg19::chr1:216196797..216196801,-#_306c33e64c7e48b353e26270eda89e59p@chr1:216196797..216196801, -
2.83e-66FFCP PHASE2:Hg19::chr19:39401676..39401683,-#_306c33e64c7e48b353e26270eda89e59p@chr19:39401676..39401683, -
2.83e-66FFCP PHASE2:Hg19::chr4:6356121..6356152,-#_306c33e64c7e48b353e26270eda89e59p@chr4:6356121..6356152, -
2.83e-66FFCP PHASE2:Hg19::chr15:46610847..46610851,+#_306c33e64c7e48b353e26270eda89e59p@chr15:46610847..46610851, +
2.83e-66FFCP PHASE2:Hg19::chr11:79659013..79659021,-#_306c33e64c7e48b353e26270eda89e59p@chr11:79659013..79659021, -
2.83e-66FFCP PHASE2:Hg19::chr1:216196797..216196801,-#_306c33e64c7e48b353e26270eda89e59p@chr1:216196797..216196801, -
2.83e-66FFCP PHASE1:Hg19::chr19:39401676..39401683,-#_306c33e64c7e48b353e26270eda89e59p@chr19:39401676..39401683, -
2.83e-66FFCP PHASE1:Hg19::chr6:112466463..112466468,+#_306c33e64c7e48b353e26270eda89e59p@chr6:112466463..112466468, +
2.83e-66FFCP PHASE2:Hg19::chr15:46610897..46610904,+#_306c33e64c7e48b353e26270eda89e59p@chr15:46610897..46610904, +
2.83e-66FFCP PHASE2:Hg19::chr11:79659052..79659060,-#_306c33e64c7e48b353e26270eda89e59p@chr11:79659052..79659060, -
2.83e-66FFCP PHASE2:Hg19::chr9:139089234..139089236,-#_306c33e64c7e48b353e26270eda89e59p@chr9:139089234..139089236, -
2.83e-66FFCP PHASE1:Hg19::chr11:79659013..79659021,-#_306c33e64c7e48b353e26270eda89e59p@chr11:79659013..79659021, -
2.83e-66FFCP PHASE2:Hg19::chr6:112466463..112466468,+#_306c33e64c7e48b353e26270eda89e59p@chr6:112466463..112466468, +
2.83e-66FFCP PHASE1:Hg19::chr9:139089234..139089236,-#_306c33e64c7e48b353e26270eda89e59p@chr9:139089234..139089236, -
2.83e-66FFCP PHASE2:Hg19::chr9:33719626..33719633,-#_306c33e64c7e48b353e26270eda89e59p@chr9:33719626..33719633, -
2.83e-66FFCP PHASE2:Hg19::chr1:40770344..40770353,-#_306c33e64c7e48b353e26270eda89e59p29@COL9A2
2.83e-66FFCP PHASE1:Hg19::chr15:46610847..46610851,+#_306c33e64c7e48b353e26270eda89e59p@chr15:46610847..46610851, +
2.83e-66FFCP PHASE1:Hg19::chr1:40770344..40770353,-#_306c33e64c7e48b353e26270eda89e59p29@COL9A2
2.83e-66FFCP PHASE2:Hg19::chr15:46610951..46610964,+#_306c33e64c7e48b353e26270eda89e59p@chr15:46610951..46610964, +
2.83e-66FFCP PHASE1:Hg19::chr9:33719626..33719633,-#_306c33e64c7e48b353e26270eda89e59p@chr9:33719626..33719633, -
2.83e-66FFCP PHASE2:Hg19::chr1:201288895..201288902,+#_306c33e64c7e48b353e26270eda89e59p@chr1:201288895..201288902, +
2.83e-66FFCP PHASE2:Hg19::chr20:49727833..49727839,-#_306c33e64c7e48b353e26270eda89e59p@chr20:49727833..49727839, -
2.83e-66FFCP PHASE1:Hg19::chr11:79659052..79659060,-#_306c33e64c7e48b353e26270eda89e59p@chr11:79659052..79659060, -
2.83e-66FFCP PHASE1:Hg19::chr5:64369097..64369105,+#_306c33e64c7e48b353e26270eda89e59p@chr5:64369097..64369105, +
2.83e-66FFCP PHASE1:Hg19::chr20:49727833..49727839,-#_306c33e64c7e48b353e26270eda89e59p@chr20:49727833..49727839, -
2.83e-66FFCP PHASE1:Hg19::chr1:201288895..201288902,+#_306c33e64c7e48b353e26270eda89e59p@chr1:201288895..201288902, +
4.55e-50FFCP PHASE2:Hg19::chr1:16090914..16090925,+#_68c4076dc7a3c095d773dcc266efd86bp22@FBLIM1
4.55e-50FFCP PHASE1:Hg19::chr1:16090914..16090925,+#_68c4076dc7a3c095d773dcc266efd86bp22@FBLIM1
9.76e-45FFCP PHASE1:Hg19::chr12:65175253..65175283,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr12:65175253..65175283, -
9.76e-45FFCP PHASE2:Hg19::chr9:33719660..33719671,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr9:33719660..33719671, -
9.76e-45FFCP PHASE2:Hg19::chr1:155048171..155048179,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr1:155048171..155048179, +
9.76e-45FFCP PHASE1:Hg19::chr9:33719660..33719671,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr9:33719660..33719671, -
9.76e-45FFCP PHASE2:Hg19::chr11:128634589..128634606,+#_b341c0d42be468d975dd0f838d0cfa3fp14@FLI1
9.76e-45FFCP PHASE1:Hg19::chr1:155048200..155048207,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr1:155048200..155048207, +
9.76e-45FFCP PHASE2:Hg19::chr1:155048200..155048207,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr1:155048200..155048207, +
9.76e-45FFCP PHASE2:Hg19::chr5:145722450..145722456,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr5:145722450..145722456, +
9.76e-45FFCP PHASE1:Hg19::chr5:145722450..145722456,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr5:145722450..145722456, +
9.76e-45FFCP PHASE2:Hg19::chr16:53653257..53653264,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr16:53653257..53653264, -
9.76e-45FFCP PHASE2:Hg19::chr9:139096224..139096231,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr9:139096224..139096231, -
9.76e-45FFCP PHASE1:Hg19::chr11:128634589..128634606,+#_b341c0d42be468d975dd0f838d0cfa3fp14@FLI1
9.76e-45FFCP PHASE1:Hg19::chr9:139096224..139096231,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr9:139096224..139096231, -
9.76e-45FFCP PHASE1:Hg19::chr16:53653257..53653264,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr16:53653257..53653264, -
9.76e-45FFCP PHASE1:Hg19::chr5:64369069..64369083,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr5:64369069..64369083, +
9.76e-45FFCP PHASE2:Hg19::chr12:65175253..65175283,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr12:65175253..65175283, -
9.76e-45FFCP PHASE1:Hg19::chr22:35921483..35921490,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr22:35921483..35921490, -
9.76e-45FFCP PHASE2:Hg19::chr5:64369069..64369083,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr5:64369069..64369083, +
9.76e-45FFCP PHASE2:Hg19::chr22:35921483..35921490,-#_b341c0d42be468d975dd0f838d0cfa3fp@chr22:35921483..35921490, -
9.76e-45FFCP PHASE1:Hg19::chr1:155048171..155048179,+#_b341c0d42be468d975dd0f838d0cfa3fp@chr1:155048171..155048179, +
1.22e-44FFCP PHASE1:Hg19::chr18:13165683..13165695,-#_5eb79173af0b148fc12d023e153b799ap@chr18:13165683..13165695, -
1.22e-44FFCP PHASE2:Hg19::chr2:3152671..3152679,-#_5eb79173af0b148fc12d023e153b799ap@chr2:3152671..3152679, -
1.22e-44FFCP PHASE2:Hg19::chr20:49727891..49727898,-#_5eb79173af0b148fc12d023e153b799ap@chr20:49727891..49727898, -
1.22e-44FFCP PHASE2:Hg19::chr5:14742023..14742037,-#_5eb79173af0b148fc12d023e153b799ap@chr5:14742023..14742037, -
1.22e-44FFCP PHASE1:Hg19::chr20:49727891..49727898,-#_5eb79173af0b148fc12d023e153b799ap@chr20:49727891..49727898, -
1.22e-44FFCP PHASE1:Hg19::chr2:3152671..3152679,-#_5eb79173af0b148fc12d023e153b799ap@chr2:3152671..3152679, -
1.22e-44FFCP PHASE1:Hg19::chr5:14742023..14742037,-#_5eb79173af0b148fc12d023e153b799ap@chr5:14742023..14742037, -
1.22e-44FFCP PHASE2:Hg19::chr20:31116333..31116338,-#_5eb79173af0b148fc12d023e153b799ap@chr20:31116333..31116338, -
1.22e-44FFCP PHASE2:Hg19::chr18:13165683..13165695,-#_5eb79173af0b148fc12d023e153b799ap@chr18:13165683..13165695, -
1.22e-44FFCP PHASE1:Hg19::chr20:31116333..31116338,-#_5eb79173af0b148fc12d023e153b799ap@chr20:31116333..31116338, -
1.22e-44FFCP PHASE2:Hg19::chr11:31312513..31312524,-#_5eb79173af0b148fc12d023e153b799ap@chr11:31312513..31312524, -
1.22e-44FFCP PHASE2:Hg19::chr5:145724630..145724641,+#_5eb79173af0b148fc12d023e153b799ap@chr5:145724630..145724641, +
1.22e-44FFCP PHASE1:Hg19::chr5:145724630..145724641,+#_5eb79173af0b148fc12d023e153b799ap@chr5:145724630..145724641, +
1.22e-44FFCP PHASE1:Hg19::chr1:216286476..216286479,-#_5eb79173af0b148fc12d023e153b799ap@chr1:216286476..216286479, -
1.22e-44FFCP PHASE2:Hg19::chr1:216286476..216286479,-#_5eb79173af0b148fc12d023e153b799ap@chr1:216286476..216286479, -
1.22e-44FFCP PHASE2:Hg19::chr12:54786411..54786421,-#_5eb79173af0b148fc12d023e153b799ap@chr12:54786411..54786421, -
1.22e-44FFCP PHASE2:Hg19::chr5:145724642..145724652,+#_5eb79173af0b148fc12d023e153b799ap@chr5:145724642..145724652, +
1.22e-44FFCP PHASE1:Hg19::chr11:31312513..31312524,-#_5eb79173af0b148fc12d023e153b799ap@chr11:31312513..31312524, -
1.22e-44FFCP PHASE1:Hg19::chr5:145724642..145724652,+#_5eb79173af0b148fc12d023e153b799ap@chr5:145724642..145724652, +
1.22e-44FFCP PHASE1:Hg19::chr12:54786411..54786421,-#_5eb79173af0b148fc12d023e153b799ap@chr12:54786411..54786421, -
1.52e-44FFCP PHASE2:Hg19::chr7:1327587..1327610,+#_87990a5de125a082721a56f190a09aabp@chr7:1327587..1327610, +
1.52e-44FFCP PHASE1:Hg19::chr7:1327587..1327610,+#_87990a5de125a082721a56f190a09aabp@chr7:1327587..1327610, +
1.52e-44FFCP PHASE2:Hg19::chr7:1327611..1327629,+#_87990a5de125a082721a56f190a09aabp@chr7:1327611..1327629, +
1.52e-44FFCP PHASE1:Hg19::chr7:1327611..1327629,+#_87990a5de125a082721a56f190a09aabp@chr7:1327611..1327629, +
1.52e-44FFCP PHASE1:Hg19::chr3:77121235..77121260,+#_87990a5de125a082721a56f190a09aabp@chr3:77121235..77121260, +
1.52e-44FFCP PHASE2:Hg19::chr3:77121235..77121260,+#_87990a5de125a082721a56f190a09aabp@chr3:77121235..77121260, +
5.62e-43FFCP PHASE2:Hg19::chr2:227008823..227008831,-#_cd2b4136474737affb931aa404e66aa7p@chr2:227008823..227008831, -
5.62e-43FFCP PHASE1:Hg19::chr2:227008823..227008831,-#_cd2b4136474737affb931aa404e66aa7p@chr2:227008823..227008831, -
1.33e-42FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_12a9018dbee4e8e59aca82cc32655d62p3@GSDMC
1.33e-42FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_12a9018dbee4e8e59aca82cc32655d62p3@GSDMC
7.14e-38FFCP PHASE1:Hg19::chr4:87770202..87770211,-#_8e27803b6aa60fc7a780a7969a3c3c28p5@SLC10A6
7.14e-38FFCP PHASE2:Hg19::chr4:87770202..87770211,-#_8e27803b6aa60fc7a780a7969a3c3c28p5@SLC10A6
2.34e-35FFCP PHASE2:Hg19::chr2:28785707..28785729,+#_779ab27b56eb165c38871d65d66df502p@chr2:28785707..28785729, +
2.34e-35FFCP PHASE1:Hg19::chr2:28785707..28785729,+#_779ab27b56eb165c38871d65d66df502p@chr2:28785707..28785729, +
4.27e-34FFCP PHASE1:Hg19::chr9:135433343..135433346,-#_8f82784a1c3750c46a526ad85b864434p@chr9:135433343..135433346, -
4.27e-34FFCP PHASE1:Hg19::chr3:182129807..182129809,-#_8f82784a1c3750c46a526ad85b864434p@chr3:182129807..182129809, -
4.27e-34FFCP PHASE2:Hg19::chr16:81253986..81254016,-#_8f82784a1c3750c46a526ad85b864434p10@PKD1L2
4.27e-34FFCP PHASE1:Hg19::chr12:52840461..52840467,-#_8f82784a1c3750c46a526ad85b864434p@chr12:52840461..52840467, -
4.27e-34FFCP PHASE1:Hg19::chr11:88953463..88953464,-#_8f82784a1c3750c46a526ad85b864434p@chr11:88953463..88953464, -
4.27e-34FFCP PHASE2:Hg19::chr12:52840487..52840511,-#_8f82784a1c3750c46a526ad85b864434p@chr12:52840487..52840511, -

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