UBERON:0004875: Difference between revisions
From FANTOM5_SSTAR
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0004876 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000922 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:38, 27 June 2012
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0004876(urogenital ridge) |
| part_of: | UBERON:0000922(embryo) |
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:52101299..52101305, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_2c808356ccd804cd36d69a04f78b05be | p17@Capn5 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:24270118..24270122, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280199..50280211, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:91107095..91107103, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_2c808356ccd804cd36d69a04f78b05be | p@chr5:88272459..88272484, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_2c808356ccd804cd36d69a04f78b05be | p2@Wfdc9 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_2c808356ccd804cd36d69a04f78b05be | p19@Clu |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:59845349..59845371,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:59845349..59845371, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75347689..75347703, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26704579..26704582, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:34813361..34813403, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:151927980..151927988, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:148445639..148445665, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:96150839..96150842, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:35930706..35930717, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:73221034..73221051, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_2c808356ccd804cd36d69a04f78b05be | p@chr12:16664708..16664723, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155923..90155932, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378968..21378988, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:33600466..33600491, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_2c808356ccd804cd36d69a04f78b05be | p@chr12:16664708..16664723, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19062951..19062955,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19062951..19062955, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_2c808356ccd804cd36d69a04f78b05be | p3@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:148625223..148625234, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:105798218..105798228,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:105798218..105798228, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_2c808356ccd804cd36d69a04f78b05be | p11@Wars |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379486..31379501, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:56772735..56772741, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:40010825..40010844,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:40010825..40010844, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51680551..51680555,-#_2c808356ccd804cd36d69a04f78b05be | p@chr14:51680551..51680555, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21380670..21380678, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:17224952..17224968,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:17224952..17224968, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:70761885..70761895,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:70761885..70761895, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:56772735..56772741, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90156002..90156013,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90156002..90156013, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155698178..155698191,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155698178..155698191, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26727675..26727681, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:110773580..110773589,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:110773580..110773589, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:66513886..66513897,-#_2c808356ccd804cd36d69a04f78b05be | p@chr5:66513886..66513897, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:24670830..24670845, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141371..19141383, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101959194..101959224,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101959194..101959224, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:75293847..75293851, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_2c808356ccd804cd36d69a04f78b05be | p@chr6:118298429..118298448, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:103896102..103896116,-#_2c808356ccd804cd36d69a04f78b05be | p@chr12:103896102..103896116, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:83487114..83487124, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75329148..75329155, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_2c808356ccd804cd36d69a04f78b05be | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:87922962..87922982, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:23045782..23045791, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_2c808356ccd804cd36d69a04f78b05be | p@chr14:69116075..69116107, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_2c808356ccd804cd36d69a04f78b05be | p3@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597818..89597827, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:44264128..44264135,+#_2c808356ccd804cd36d69a04f78b05be | p5@Spink12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101958887..101958896, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:113585667..113585673, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:167688595..167688624, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496166..130496188, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:167480413..167480463, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_2c808356ccd804cd36d69a04f78b05be | p15@Pgap2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_2c808356ccd804cd36d69a04f78b05be | p7@Rnase12 |
