UBERON:0004875: Difference between revisions
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0004876 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000922 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:38, 27 June 2012
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0004876(urogenital ridge) |
| part_of: | UBERON:0000922(embryo) |
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378871..21378901, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:152388977..152388983, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:192816674..192816714, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:43230846..43230884, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_2c808356ccd804cd36d69a04f78b05be | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141371..19141383, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:167688595..167688624, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_2c808356ccd804cd36d69a04f78b05be | p@chr18:44261480..44261486, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_2c808356ccd804cd36d69a04f78b05be | p3@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379372..21379404, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21383212..21383225, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:126604677..126604701, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20419453..20419476, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_2c808356ccd804cd36d69a04f78b05be | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155722142..155722175, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280181..50280192, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:11079838..11079844, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141471..19141518, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:24270118..24270122, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:113585667..113585673,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:113585667..113585673, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:65941913..65941923, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496286..130496293, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:40010825..40010844, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:83487114..83487124, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_2c808356ccd804cd36d69a04f78b05be | p4@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_2c808356ccd804cd36d69a04f78b05be | p@chr12:104945515..104945524, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_2c808356ccd804cd36d69a04f78b05be | p7@P4ha2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:87936238..87936249, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496260..130496269, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_2c808356ccd804cd36d69a04f78b05be | p3@Ido1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:164434346..164434353, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155707..90155720, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:127470322..127470326, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26610184..26610191,-#_2c808356ccd804cd36d69a04f78b05be | p4@Glb1l2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:106730107..106730125, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:160573065..160573077, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597660..89597668, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101959194..101959224,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101959194..101959224, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:75798097..75798101, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:172632171..172632178, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:66521865..66521876, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:24865194..24865204, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_2c808356ccd804cd36d69a04f78b05be | p@chr4:134893699..134893708, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378774..21378782, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379118..21379120, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_2c808356ccd804cd36d69a04f78b05be | p2@9230110F15Rik |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379454..31379466,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379454..31379466, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:72756032..72756041,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:72756032..72756041, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_2c808356ccd804cd36d69a04f78b05be | p3@Gm6040, p3@LOC100503992 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155697874..155697885, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87936213..87936218,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:87936213..87936218, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:63611201..63611210, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26611214..26611227, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_2c808356ccd804cd36d69a04f78b05be | p21@Pgap2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:96014490..96014496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25349402..25349409,-#_2c808356ccd804cd36d69a04f78b05be | p3@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:75866210..75866235, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_2c808356ccd804cd36d69a04f78b05be | p3@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_2c808356ccd804cd36d69a04f78b05be | p11@Prrx1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:25752228..25752237, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_2c808356ccd804cd36d69a04f78b05be | p4@Lcn12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:54359310..54359337,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:54359310..54359337, - |
