UBERON:0004211: Difference between revisions
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|part_of= | |part_of=UBERON:0001285 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 13:35, 27 June 2012
| Name: | nephron epithelium |
|---|---|
| Definition: | "The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088] |
| Synonyms: |
"epithelial tissue of nephron" EXACT [OBOL:automatic] "epithelium of nephron" EXACT [OBOL:automatic] "nephron epithelial tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004819(kidney epithelium) |
|---|---|
| part_of: | UBERON:0001285(nephron) |
Children
| is a: | UBERON:0001231 (nephron tubule),UBERON:0004810 (nephron tubule epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11597-120H4 (Renal Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
- 11677-122H3
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004211 (nephron epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.05e-87 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_dc73b98f3f56766cbeed91be69a94aad | p@chr2:693380..693398, + |
| 1.05e-87 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_dc73b98f3f56766cbeed91be69a94aad | p@chr2:693380..693398, + |
| 1.72e-83 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_ff34f543908e139b84959deae9c80289 | p4@MEGF11 |
| 1.72e-83 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_ff34f543908e139b84959deae9c80289 | p4@MEGF11 |
| 2.2e-74 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_aef1096179e15329f990179e651f9897 | p7@HOXA10 |
| 2.2e-74 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_aef1096179e15329f990179e651f9897 | p7@HOXA10 |
| 7.63e-66 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_e282aec0b1769748574acc233fd84557 | p@chr1:1100457..1100470, + |
| 7.63e-66 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_e282aec0b1769748574acc233fd84557 | p@chr1:1100457..1100470, + |
| 6.44e-62 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_2085800c710a4b44a25011ed8e45a02c | p4@PAX2 |
| 6.44e-62 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_2085800c710a4b44a25011ed8e45a02c | p4@PAX2 |
| 5.84e-60 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_7bc8f37665601ba582c26dfd95f7e007 | p@chr18:3456189..3456200, + |
| 5.84e-60 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_7bc8f37665601ba582c26dfd95f7e007 | p@chr18:3456189..3456200, + |
| 6.18e-60 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_ed335e502407b041d7dc72856eef79b7 | p3@PAX2 |
| 6.18e-60 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_ed335e502407b041d7dc72856eef79b7 | p3@PAX2 |
| 4.45e-59 | FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_f26f27bba79a45b63a883bb3bf0cd3bd | p6@LRRN4 |
| 4.45e-59 | FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_f26f27bba79a45b63a883bb3bf0cd3bd | p6@LRRN4 |
| 3.49e-58 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_81bd9fbc76f2e210a51a8903c0f6a887 | p@chr5:74244100..74244117, + |
| 3.49e-58 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_81bd9fbc76f2e210a51a8903c0f6a887 | p@chr5:74244100..74244117, + |
| 3.91e-56 | FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_4f9e3776c37c314a4fab087b1d58e916 | p2@AB527789 |
| 3.91e-56 | FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_4f9e3776c37c314a4fab087b1d58e916 | p2@AB527789 |
| 3.83e-55 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_17ffbf3bac544a1b87017b9fa4df2cd6 | p@chr16:86604624..86604648, + |
| 3.83e-55 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_17ffbf3bac544a1b87017b9fa4df2cd6 | p@chr16:86604624..86604648, + |
| 3.51e-54 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_766aba9406259b02ab2fcaa060e83536 | p@chr16:86768403..86768437, + |
| 3.51e-54 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_766aba9406259b02ab2fcaa060e83536 | p@chr16:86768403..86768437, + |
| 6.09e-53 | FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_4f42b9d29be385b5189c1e251f7ae3ef | p2@CLDN6 |
| 6.09e-53 | FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_4f42b9d29be385b5189c1e251f7ae3ef | p2@CLDN6 |
| 2.79e-52 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_f6dcc1e67842b1aeb2afb26b61dedc51 | p1@ENST00000418041, p1@ENST00000443104 |
| 2.79e-52 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_f6dcc1e67842b1aeb2afb26b61dedc51 | p1@ENST00000418041, p1@ENST00000443104 |
| 1.61e-50 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_c87575b70031c87a9f02cd4296fa4f6f | p@chr7:7606139..7606151, - |
| 1.61e-50 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_c87575b70031c87a9f02cd4296fa4f6f | p@chr7:7606139..7606151, - |
| 1.96e-50 | FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_ce89ca06e2d00b266b264996d2d784fb | p3@HNF1B |
| 1.96e-50 | FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_ce89ca06e2d00b266b264996d2d784fb | p3@HNF1B |
| 1.73e-49 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_201a0d065f1af1b189b452fe3e261688 | p@chr7:140227349..140227360, - |
| 1.73e-49 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_201a0d065f1af1b189b452fe3e261688 | p@chr7:140227349..140227360, - |
| 2.61e-49 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_b649007d6d19db3eeea9fdbd47fee5f8 | p16@HOXA10 |
| 2.61e-49 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_b649007d6d19db3eeea9fdbd47fee5f8 | p16@HOXA10 |
| 3.13e-49 | FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_9199b7ca95abb45d764f1659a20bee5c | p2@B3GALT5 |
| 3.13e-49 | FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_9199b7ca95abb45d764f1659a20bee5c | p2@B3GALT5 |
| 4.07e-49 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_bb28f0e53255ddf1e34063138213715c | p4@AIF1L |
| 4.07e-49 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_bb28f0e53255ddf1e34063138213715c | p4@AIF1L |
| 1.12e-47 | FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_347e8e3978dc5620c2603c03c9874b24 | p@chr7:140227303..140227330, - |
| 1.12e-47 | FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_347e8e3978dc5620c2603c03c9874b24 | p@chr7:140227303..140227330, - |
| 1.23e-44 | FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_c657444025c22606ad35530a6778200a | p3@LRRN4 |
| 1.23e-44 | FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_c657444025c22606ad35530a6778200a | p3@LRRN4 |
| 3.62e-44 | FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_59af6cf53831edfefc609e62c83606c8 | p@chr21:46826248..46826282, - |
| 3.62e-44 | FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_59af6cf53831edfefc609e62c83606c8 | p@chr21:46826248..46826282, - |
| 3.06e-43 | FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_0b8eca4a6fc200d454444c8effc10e07 | p2@LRRN4 |
| 3.06e-43 | FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_0b8eca4a6fc200d454444c8effc10e07 | p2@LRRN4 |
| 1.81e-42 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_fb5870d05019a07cb850907487272cce | p@chr15:85403302..85403304, + |
| 1.81e-42 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_fb5870d05019a07cb850907487272cce | p@chr15:85403302..85403304, + |
| 1.82e-42 | FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_a732bd2521e8a0351b862a374c22cbea | p@chr7:98453821..98453843, - |
| 1.82e-42 | FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_a732bd2521e8a0351b862a374c22cbea | p@chr7:98453821..98453843, - |
| 2.77e-42 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_3bdcdc92bc01e340d90c4902221628a3 | p7@LRRN4 |
| 2.77e-42 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_3bdcdc92bc01e340d90c4902221628a3 | p7@LRRN4 |
| 7.5e-42 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_d73354abe3372d534d38a5f036f315ae | p2@PAX2 |
| 7.5e-42 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_d73354abe3372d534d38a5f036f315ae | p2@PAX2 |
| 3.59e-41 | FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_6feb4b3eca6b2ed7af99b89d845760c5 | p16@TJP2 |
| 3.59e-41 | FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_6feb4b3eca6b2ed7af99b89d845760c5 | p16@TJP2 |
| 9.39e-41 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_fea8d783c299797dfe5eb8f92eea353b | p1@ENST00000413103 |
| 9.39e-41 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_fea8d783c299797dfe5eb8f92eea353b | p1@ENST00000413103 |
| 1.7e-40 | FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_c74d69008eaccec27b6f43f53faf304c | p5@LRRN4 |
| 1.7e-40 | FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_c74d69008eaccec27b6f43f53faf304c | p5@LRRN4 |
| 2.9e-40 | FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_a82d722c151b6c738c6322683238f4b1 | p2@PLA2G2F |
| 2.9e-40 | FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_a82d722c151b6c738c6322683238f4b1 | p2@PLA2G2F |
| 8.58e-40 | FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_728a385779b5c8575132f07c1e4db865 | p3@AIF1L |
| 8.58e-40 | FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_728a385779b5c8575132f07c1e4db865 | p3@AIF1L |
| 1.21e-39 | FFCP PHASE2:Hg19::chr2:31361432..31361442,-#_6bc14d7c830e7db361fc066a89d8cdb4 | p6@GALNT14 |
| 1.21e-39 | FFCP PHASE1:Hg19::chr2:31361432..31361442,-#_6bc14d7c830e7db361fc066a89d8cdb4 | p6@GALNT14 |
| 3.08e-39 | FFCP PHASE1:Hg19::chr20:6033120..6033128,-#_044b03d63b4cf79e1d205c37e774b636 | p4@AB527789 |
| 3.08e-39 | FFCP PHASE2:Hg19::chr20:6033120..6033128,-#_044b03d63b4cf79e1d205c37e774b636 | p4@AB527789 |
| 7.42e-37 | FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_3a90e886d167cac797095ceed0e3d4f8 | p4@DCDC2 |
| 7.42e-37 | FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_3a90e886d167cac797095ceed0e3d4f8 | p4@DCDC2 |
| 1.29e-36 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_12fe643de9ee15b28733e67075168fb6 | p@chr2:693362..693373, + |
| 1.29e-36 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_12fe643de9ee15b28733e67075168fb6 | p@chr2:693362..693373, + |
| 1.36e-36 | FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_e522bf5910f3c52b56a49441020e01db | p1@HOXD4 |
| 1.36e-36 | FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_e522bf5910f3c52b56a49441020e01db | p1@HOXD4 |
| 6.21e-36 | FFCP PHASE1:Hg19::chr2:176982078..176982095,+#_514c2fa38d6ace72572409e0f7b4dc85 | p@chr2:176982078..176982095, + |
| 6.21e-36 | FFCP PHASE2:Hg19::chr2:176982078..176982095,+#_514c2fa38d6ace72572409e0f7b4dc85 | p@chr2:176982078..176982095, + |
| 2.64e-35 | FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_69a4e9b51726234c46ac35b4ca906f0f | p1@AB527789 |
| 2.64e-35 | FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_69a4e9b51726234c46ac35b4ca906f0f | p1@AB527789 |
| 3.85e-35 | FFCP PHASE2:Hg19::chr2:108994466..108994485,+#_89926dd13d9cdd658dcedaaaa4d995a5 | p3@SULT1C4 |
| 3.85e-35 | FFCP PHASE1:Hg19::chr2:108994466..108994485,+#_89926dd13d9cdd658dcedaaaa4d995a5 | p3@SULT1C4 |
| 8.14e-35 | FFCP PHASE2:Hg19::chr18:43405633..43405645,+#_fb2f8cc9343f35b53ccafd02df9d7114 | p4@SIGLEC15 |
| 8.14e-35 | FFCP PHASE1:Hg19::chr18:43405633..43405645,+#_fb2f8cc9343f35b53ccafd02df9d7114 | p4@SIGLEC15 |
| 1.65e-34 | FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_e69293fd8ed3d3a4ff62ddf6cce2f089 | p1@ENST00000444849 |
| 1.65e-34 | FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_e69293fd8ed3d3a4ff62ddf6cce2f089 | p1@ENST00000444849 |
| 1.14e-33 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_df0dddd47308f21c841397f9d0127e69 | p@chr17:171147..171161, + |
| 1.14e-33 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_df0dddd47308f21c841397f9d0127e69 | p@chr17:171147..171161, + |
| 1.52e-33 | FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_5e823c76f531a2118650b3755ba9184f | p2@C14orf105 |
| 1.52e-33 | FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_5e823c76f531a2118650b3755ba9184f | p2@C14orf105 |
| 1.8e-33 | FFCP PHASE1:Hg19::chr2:31361543..31361564,-#_366ca64db59348f4acabb38d7ccca9af | p5@GALNT14 |
| 1.8e-33 | FFCP PHASE2:Hg19::chr2:31361543..31361564,-#_366ca64db59348f4acabb38d7ccca9af | p5@GALNT14 |
| 2.35e-33 | FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_06f3dffaa7d05b9739d24bb0548a26d4 | p1@CLDN16 |
| 2.35e-33 | FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_06f3dffaa7d05b9739d24bb0548a26d4 | p1@CLDN16 |
| 4.12e-33 | FFCP PHASE1:Hg19::chr17:36065029..36065045,-#_ea48e9c43a8057b8aec3f364e1f4c56b | p@chr17:36065029..36065045, - |
| 4.12e-33 | FFCP PHASE2:Hg19::chr17:36065029..36065045,-#_ea48e9c43a8057b8aec3f364e1f4c56b | p@chr17:36065029..36065045, - |
| 8.12e-33 | FFCP PHASE2:Hg19::chr17:35293950..35293973,-#_1b86d29d26a38c3a58be6ecc554e7b3d | p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387 |
| 8.12e-33 | FFCP PHASE1:Hg19::chr17:35293950..35293973,-#_1b86d29d26a38c3a58be6ecc554e7b3d | p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387 |
| 1.25e-32 | FFCP PHASE1:Hg19::chr22:30653574..30653606,-#_1e60368f60ace6291edccb8b0d98778e | p@chr22:30653574..30653606, - |
| 1.25e-32 | FFCP PHASE2:Hg19::chr22:30653574..30653606,-#_1e60368f60ace6291edccb8b0d98778e | p@chr22:30653574..30653606, - |
