CL:0002589: Difference between revisions
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 17:28, 26 June 2012
| Name: | smooth muscle cell of the brachiocephalic vasculature |
|---|---|
| Namespace: | cell |
| Definition: | "A smooth muscle cell of the bachiocephalic vasculature." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:00:58Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell) |
|---|
Children
| derives from: | FF:0000169 (human smooth muscle cell of the brachiocephalic vasculature sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
- 11361-117I2 (Smooth Muscle Cells - Brachiocephalic, donor2)
- 11433-118H2 (Smooth Muscle Cells - Brachiocephalic, donor3)
Mouse (Mus musculus)
- 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
- 11361-117I2 (Smooth Muscle Cells - Brachiocephalic, donor2)
- 11433-118H2 (Smooth Muscle Cells - Brachiocephalic, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002589 (smooth muscle cell of the brachiocephalic vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.52e-50 | FFCP PHASE1:Hg19::chr7:46213564..46213575,+#_81678cab55ec4bf27cf28ceae49ec6ff | p@chr7:46213564..46213575, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr7:46213564..46213575,+#_81678cab55ec4bf27cf28ceae49ec6ff | p@chr7:46213564..46213575, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr7:46213607..46213616,+#_81678cab55ec4bf27cf28ceae49ec6ff | p@chr7:46213607..46213616, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr7:46213607..46213616,+#_81678cab55ec4bf27cf28ceae49ec6ff | p@chr7:46213607..46213616, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr8:69834272..69834299,-#_12f490aeaa0ef5e33da93facb023c10a | p@chr8:69834272..69834299, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr12:76175239..76175250,-#_12f490aeaa0ef5e33da93facb023c10a | p@chr12:76175239..76175250, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr8:69834272..69834299,-#_12f490aeaa0ef5e33da93facb023c10a | p@chr8:69834272..69834299, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr7:46213930..46213940,+#_12f490aeaa0ef5e33da93facb023c10a | p@chr7:46213930..46213940, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr7:46213930..46213940,+#_12f490aeaa0ef5e33da93facb023c10a | p@chr7:46213930..46213940, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr12:76175239..76175250,-#_12f490aeaa0ef5e33da93facb023c10a | p@chr12:76175239..76175250, - |
| 4.55e-29 | FFCP PHASE1:Hg19::chr1:162954730..162954735,+#_7c9d825d1d25ef2d786fd0b46f4fe0a8 | p@chr1:162954730..162954735, + |
| 4.55e-29 | FFCP PHASE2:Hg19::chr1:162954730..162954735,+#_7c9d825d1d25ef2d786fd0b46f4fe0a8 | p@chr1:162954730..162954735, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr7:82172409..82172413,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr7:82172409..82172413, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr7:82172409..82172413,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr7:82172409..82172413, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr6:121837348..121837351,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr6:121837348..121837351, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr5:102847532..102847538,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr5:102847532..102847538, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr6:121837348..121837351,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr6:121837348..121837351, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr7:46214057..46214073,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr7:46214057..46214073, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:102847532..102847538,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr5:102847532..102847538, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr7:46214057..46214073,+#_62ebe9b3b73e018aa0d5b36f734515f3 | p@chr7:46214057..46214073, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr7:46214090..46214099,+#_ad095d64ae62f6f9780bab0a80906a1c | p@chr7:46214090..46214099, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr7:46214090..46214099,+#_ad095d64ae62f6f9780bab0a80906a1c | p@chr7:46214090..46214099, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:73000449..73000459,+#_f11226fba72f6e082ceb490296b776d8 | p13@P2RY6 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr11:73000449..73000459,+#_f11226fba72f6e082ceb490296b776d8 | p13@P2RY6 |
| 1.26e-21 | FFCP PHASE2:Hg19::chr9:140351903..140351920,-#_71905d816a146e29f8eb5e96fb290744 | p6@NELF |
| 1.26e-21 | FFCP PHASE1:Hg19::chr9:140351903..140351920,-#_71905d816a146e29f8eb5e96fb290744 | p6@NELF |
| 5.7e-21 | FFCP PHASE1:Hg19::chr5:95053375..95053385,+#_39e9389e60520c10de48eaf3d424bf8d | p30@RHOBTB3 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr5:95053375..95053385,+#_39e9389e60520c10de48eaf3d424bf8d | p30@RHOBTB3 |
| 5.4e-20 | FFCP PHASE1:Hg19::chr4:74702707..74702718,+#_2bdec7617c2725c95929f73aee8c9a44 | p7@CXCL6 |
| 5.4e-20 | FFCP PHASE2:Hg19::chr4:74702707..74702718,+#_2bdec7617c2725c95929f73aee8c9a44 | p7@CXCL6 |
| 5.88e-19 | FFCP PHASE2:Hg19::chr17:67875049..67875058,+#_1b12536fa2d9d840bb5449902f45847a | p@chr17:67875049..67875058, + |
| 5.88e-19 | FFCP PHASE1:Hg19::chr17:67875049..67875058,+#_1b12536fa2d9d840bb5449902f45847a | p@chr17:67875049..67875058, + |
| 2.9e-18 | FFCP PHASE2:Hg19::chr1:79219369..79219376,+#_ca18f37bb301c947f5fb874d79557214 | p@chr1:79219369..79219376, + |
| 2.9e-18 | FFCP PHASE1:Hg19::chr1:79219369..79219376,+#_ca18f37bb301c947f5fb874d79557214 | p@chr1:79219369..79219376, + |
| 7.67e-18 | FFCP PHASE1:Hg19::chr3:30226342..30226387,-#_791fb70530eb0f414172fd8e6a83f78d | p@chr3:30226342..30226387, - |
| 7.67e-18 | FFCP PHASE2:Hg19::chr3:30226342..30226387,-#_791fb70530eb0f414172fd8e6a83f78d | p@chr3:30226342..30226387, - |
| 9.07e-18 | FFCP PHASE1:Hg19::chr1:183204105..183204116,+#_71cd4f685d69e24e90f6d043f5b380c0 | p@chr1:183204105..183204116, + |
| 9.07e-18 | FFCP PHASE2:Hg19::chr1:183204105..183204116,+#_71cd4f685d69e24e90f6d043f5b380c0 | p@chr1:183204105..183204116, + |
| 9.07e-18 | FFCP PHASE1:Hg19::chr11:33891541..33891551,-#_71cd4f685d69e24e90f6d043f5b380c0 | p10@LMO2 |
| 9.07e-18 | FFCP PHASE2:Hg19::chr11:33891541..33891551,-#_71cd4f685d69e24e90f6d043f5b380c0 | p10@LMO2 |
| 1.04e-17 | FFCP PHASE1:Hg19::chr8:69765189..69765209,-#_89189c9d88570ab8024c160d9236bfd6 | p1@ENST00000522354 |
| 1.04e-17 | FFCP PHASE2:Hg19::chr8:69765189..69765209,-#_89189c9d88570ab8024c160d9236bfd6 | p1@ENST00000522354 |
| 1.27e-17 | FFCP PHASE1:Hg19::chr8:128926504..128926507,-#_241014ee3c6d8d32e4bf83752d8f672d | p@chr8:128926504..128926507, - |
| 1.27e-17 | FFCP PHASE2:Hg19::chr8:128926504..128926507,-#_241014ee3c6d8d32e4bf83752d8f672d | p@chr8:128926504..128926507, - |
| 3.12e-17 | FFCP PHASE1:Hg19::chr17:12453278..12453291,+#_c14151a34a0b33f4c5df2a05df1d847c | p1@FLJ34690 |
| 3.12e-17 | FFCP PHASE2:Hg19::chr17:12453278..12453291,+#_c14151a34a0b33f4c5df2a05df1d847c | p1@FLJ34690 |
| 1.08e-16 | FFCP PHASE1:Hg19::chr7:41956273..41956284,-#_7a0c579b4dbeec4df15792691666cd65 | p@chr7:41956273..41956284, - |
| 1.08e-16 | FFCP PHASE2:Hg19::chr7:41956273..41956284,-#_7a0c579b4dbeec4df15792691666cd65 | p@chr7:41956273..41956284, - |
| 7.31e-16 | FFCP PHASE1:Hg19::chr10:33247025..33247030,+#_0a6e084e97fd0107f56a0695aa28efe0 | p@chr10:33247025..33247030, + |
| 7.31e-16 | FFCP PHASE2:Hg19::chr10:33247025..33247030,+#_0a6e084e97fd0107f56a0695aa28efe0 | p@chr10:33247025..33247030, + |
| 1.08e-15 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_864c9348d235eae3fd4c9261d52bd6af | p@chr6:53359400..53359406, + |
| 1.08e-15 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_864c9348d235eae3fd4c9261d52bd6af | p@chr6:53359400..53359406, + |
| 1.23e-15 | FFCP PHASE1:Hg19::chr7:45952362..45952373,-#_9cb550a55d891ff3a393671bf3b558fa | p25@IGFBP3 |
| 1.23e-15 | FFCP PHASE2:Hg19::chr7:45952362..45952373,-#_9cb550a55d891ff3a393671bf3b558fa | p25@IGFBP3 |
| 1.33e-15 | FFCP PHASE1:Hg19::chr4:99934696..99934700,-#_31bc6c27d31743c852d626b788843ca8 | p@chr4:99934696..99934700, - |
| 1.33e-15 | FFCP PHASE1:Hg19::chr5:63961948..63961959,-#_31bc6c27d31743c852d626b788843ca8 | p@chr5:63961948..63961959, - |
| 1.33e-15 | FFCP PHASE2:Hg19::chr5:63961948..63961959,-#_31bc6c27d31743c852d626b788843ca8 | p@chr5:63961948..63961959, - |
| 1.33e-15 | FFCP PHASE2:Hg19::chr4:99934696..99934700,-#_31bc6c27d31743c852d626b788843ca8 | p@chr4:99934696..99934700, - |
| 2.05e-15 | FFCP PHASE1:Hg19::chr21:26713474..26713508,-#_8a0c6258c13b3d4f497bda39dab01276 | p@chr21:26713474..26713508, - |
| 2.05e-15 | FFCP PHASE2:Hg19::chr21:26713474..26713508,-#_8a0c6258c13b3d4f497bda39dab01276 | p@chr21:26713474..26713508, - |
| 2.05e-15 | FFCP PHASE1:Hg19::chr9:118431048..118431059,+#_8a0c6258c13b3d4f497bda39dab01276 | p@chr9:118431048..118431059, + |
| 2.05e-15 | FFCP PHASE2:Hg19::chr9:118431048..118431059,+#_8a0c6258c13b3d4f497bda39dab01276 | p@chr9:118431048..118431059, + |
| 2.24e-15 | FFCP PHASE2:Hg19::chr3:67141193..67141198,+#_054578207e4131112d1688e54fe8fc50 | p@chr3:67141193..67141198, + |
| 2.24e-15 | FFCP PHASE1:Hg19::chr3:67141193..67141198,+#_054578207e4131112d1688e54fe8fc50 | p@chr3:67141193..67141198, + |
| 2.37e-15 | FFCP PHASE1:Hg19::chr4:67300735..67300776,-#_c6bc9a3ee91717ceafd4b194fccca54c | p@chr4:67300735..67300776, - |
| 2.37e-15 | FFCP PHASE2:Hg19::chr4:67300735..67300776,-#_c6bc9a3ee91717ceafd4b194fccca54c | p@chr4:67300735..67300776, - |
| 2.74e-15 | FFCP PHASE1:Hg19::chr12:65959975..65959997,+#_844a0d071852faa9ccb7efef4c4602d3 | p@chr12:65959975..65959997, + |
| 2.74e-15 | FFCP PHASE2:Hg19::chr12:65959975..65959997,+#_844a0d071852faa9ccb7efef4c4602d3 | p@chr12:65959975..65959997, + |
| 3.37e-15 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_db4a97e9b8aef638f049996d2b1b542e | p@chr3:106484411..106484418, + |
| 3.37e-15 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_db4a97e9b8aef638f049996d2b1b542e | p@chr3:106484411..106484418, + |
| 3.46e-15 | FFCP PHASE2:Hg19::chr9:118916228..118916241,+#_78135f7ff0df328acd51ab32f43bd407 | p18@PAPPA |
| 3.46e-15 | FFCP PHASE1:Hg19::chr9:118916228..118916241,+#_78135f7ff0df328acd51ab32f43bd407 | p18@PAPPA |
| 4.61e-15 | FFCP PHASE1:Hg19::chr9:118435168..118435186,+#_da503cb3172752399d7b93662a50816e | p@chr9:118435168..118435186, + |
| 4.61e-15 | FFCP PHASE2:Hg19::chr9:118435168..118435186,+#_da503cb3172752399d7b93662a50816e | p@chr9:118435168..118435186, + |
| 5.71e-15 | FFCP PHASE1:Hg19::chr8:26248799..26248836,-#_b07e528923d3a454a870e540ca4e3bc8 | p@chr8:26248799..26248836, - |
| 5.71e-15 | FFCP PHASE2:Hg19::chr8:26248799..26248836,-#_b07e528923d3a454a870e540ca4e3bc8 | p@chr8:26248799..26248836, - |
| 1.37e-14 | FFCP PHASE1:Hg19::chr7:93516018..93516037,-#_4f3fb8d346e3f4503f323295b247c8d7 | p@chr7:93516018..93516037, - |
| 1.37e-14 | FFCP PHASE2:Hg19::chr7:93516018..93516037,-#_4f3fb8d346e3f4503f323295b247c8d7 | p@chr7:93516018..93516037, - |
| 2.36e-14 | FFCP PHASE1:Hg19::chr3:106569465..106569481,-#_7e5ce1a31c491df3075ae3fca157c237 | p@chr3:106569465..106569481, - |
| 2.36e-14 | FFCP PHASE2:Hg19::chr3:106569465..106569481,-#_7e5ce1a31c491df3075ae3fca157c237 | p@chr3:106569465..106569481, - |
| 5.17e-14 | FFCP PHASE1:Hg19::chr18:25757224..25757232,-#_674029b378b297e9fa68cff1cf7b9d33 | p19@CDH2 |
| 5.17e-14 | FFCP PHASE2:Hg19::chr18:25757224..25757232,-#_674029b378b297e9fa68cff1cf7b9d33 | p19@CDH2 |
| 5.44e-14 | FFCP PHASE2:Hg19::chr7:45960456..45960484,+#_90e032f8f8885e998644015fa58038a8 | p@chr7:45960456..45960484, + |
| 5.44e-14 | FFCP PHASE1:Hg19::chr7:45960456..45960484,+#_90e032f8f8885e998644015fa58038a8 | p@chr7:45960456..45960484, + |
| 6.43e-14 | FFCP PHASE1:Hg19::chr5:102847592..102847595,+#_6ff8ebbf70f27ca5c59057cd31e80401 | p@chr5:102847592..102847595, + |
| 6.43e-14 | FFCP PHASE2:Hg19::chr5:102847592..102847595,+#_6ff8ebbf70f27ca5c59057cd31e80401 | p@chr5:102847592..102847595, + |
| 9.4e-14 | FFCP PHASE1:Hg19::chr6:151392051..151392059,+#_3a25adc1eb7f5901150dcee1651119d3 | p@chr6:151392051..151392059, + |
| 9.4e-14 | FFCP PHASE2:Hg19::chr6:151392051..151392059,+#_3a25adc1eb7f5901150dcee1651119d3 | p@chr6:151392051..151392059, + |
| 9.4e-14 | FFCP PHASE1:Hg19::chr16:59666186..59666189,-#_3a25adc1eb7f5901150dcee1651119d3 | p@chr16:59666186..59666189, - |
| 9.4e-14 | FFCP PHASE2:Hg19::chr16:59666186..59666189,-#_3a25adc1eb7f5901150dcee1651119d3 | p@chr16:59666186..59666189, - |
| 1.11e-13 | FFCP PHASE1:Hg19::chr4:74736294..74736305,+#_522f8e8266eb4808e3375e2dea5b1ea2 | p@chr4:74736294..74736305, + |
| 1.11e-13 | FFCP PHASE2:Hg19::chr4:74736294..74736305,+#_522f8e8266eb4808e3375e2dea5b1ea2 | p@chr4:74736294..74736305, + |
| 1.25e-13 | FFCP PHASE1:Hg19::chr9:118916382..118916386,+#_8c7e09472f0e1ab58e14749a5032ef68 | p19@PAPPA |
| 1.25e-13 | FFCP PHASE2:Hg19::chr9:118916382..118916386,+#_8c7e09472f0e1ab58e14749a5032ef68 | p19@PAPPA |
| 1.37e-13 | FFCP PHASE1:Hg19::chr9:118356219..118356259,+#_47d2e59f5e510f44695c2fdb1f0703ed | p@chr9:118356219..118356259, + |
| 1.37e-13 | FFCP PHASE2:Hg19::chr9:118356219..118356259,+#_47d2e59f5e510f44695c2fdb1f0703ed | p@chr9:118356219..118356259, + |
| 2.12e-13 | FFCP PHASE2:Hg19::chr4:74608220..74608239,-#_e6d490c58d1281432a3abbb56428e412 | p@chr4:74608220..74608239, - |
| 2.12e-13 | FFCP PHASE1:Hg19::chr4:74608220..74608239,-#_e6d490c58d1281432a3abbb56428e412 | p@chr4:74608220..74608239, - |
| 5.6e-13 | FFCP PHASE1:Hg19::chr2:159994500..159994523,+#_f45e17555ef153be9e01ce697df4a461 | p@chr2:159994500..159994523, + |
| 5.6e-13 | FFCP PHASE2:Hg19::chr2:159994500..159994523,+#_f45e17555ef153be9e01ce697df4a461 | p@chr2:159994500..159994523, + |
