CL:0002078: Difference between revisions
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
Revision as of 17:26, 26 June 2012
| Name: | meso-epithelial cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial%20cell.html] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial mesenchymal cell" EXACT [] | ||
| Created by: | tmeehan | ||
| Creation date: | 2010-06-29T03:49:14Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|
Children
| is a: | CL:0000115 (endothelial cell),CL:0000214 (synovial cell),CL:0002097 (cortical cell of adrenal gland),CL:0002174 (follicular cell of ovary),CL:0002306 (epithelial cell of proximal tubule) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10624-108H3 (granulosa cell tumor cell line:KGN)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
... further results Mouse (Mus musculus)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10624-108H3 (granulosa cell tumor cell line:KGN)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002078 (meso-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.61e-117 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_b18ed2809f04249b04b64cf18144be92 | p@chr6:3753188..3753192, - |
| 3.61e-117 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_b18ed2809f04249b04b64cf18144be92 | p@chr6:3753188..3753192, - |
| 1.28e-111 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_865d75356dd3140b8e78d5dd71764359 | p1@MIR216A |
| 1.28e-111 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_865d75356dd3140b8e78d5dd71764359 | p1@MIR216A |
| 9.18e-108 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_31ec0435d4df9b43d30ac002548e2838 | p@chr11:124761247..124761258, - |
| 9.18e-108 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_31ec0435d4df9b43d30ac002548e2838 | p@chr11:124761247..124761258, - |
| 1.26e-107 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_0fa26827e4e3da91c6ddc99b9f749fbb | p5@ICAM2 |
| 1.26e-107 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_0fa26827e4e3da91c6ddc99b9f749fbb | p5@ICAM2 |
| 5.39e-97 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_e701ccfec059c50762b70cb2c52813b9 | p@chr16:2220383..2220402, + |
| 5.39e-97 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_e701ccfec059c50762b70cb2c52813b9 | p@chr16:2220383..2220402, + |
| 2.31e-93 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_0dcb5814a9f62c9eed66384ae880f10a | p@chrX:71299684..71299699, + |
| 2.31e-93 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_0dcb5814a9f62c9eed66384ae880f10a | p@chrX:71299684..71299699, + |
| 2.59e-93 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_1c67b1e5cfcaedbdc92bda504f8a3985 | p1@ENST00000513158 |
| 2.59e-93 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_1c67b1e5cfcaedbdc92bda504f8a3985 | p1@ENST00000513158 |
| 1.06e-92 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_3252057c82e8ee23d38ef7c6a67159c7 | p@chr13:32835894..32835907, + |
| 1.06e-92 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_3252057c82e8ee23d38ef7c6a67159c7 | p@chr13:32835894..32835907, + |
| 4.79e-90 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_8cffd539e7ec0046620d83e2b5947a6a | p@chr18:33047117..33047138, - |
| 4.79e-90 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_8cffd539e7ec0046620d83e2b5947a6a | p@chr18:33047117..33047138, - |
| 6.7e-90 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_530aaf60263bcfc81b5e0312f8753d4a | p@chr18:33046982..33046991, - |
| 6.7e-90 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_530aaf60263bcfc81b5e0312f8753d4a | p@chr18:33046982..33046991, - |
| 7.52e-90 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_d2bb636066285299bb17378b8e8f51d3 | p@chr15:39423060..39423066, + |
| 7.52e-90 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_d2bb636066285299bb17378b8e8f51d3 | p@chr15:39423060..39423066, + |
| 8.67e-89 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_17df8e21066d2c3bc2faf45ec08e6e38 | p2@BMX |
| 8.67e-89 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_17df8e21066d2c3bc2faf45ec08e6e38 | p2@BMX |
| 8.68e-88 | FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_c12819a03c65dbfd4b6d2b263a0fcf64 | p@chr12:105863654..105863682, + |
| 8.68e-88 | FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_c12819a03c65dbfd4b6d2b263a0fcf64 | p@chr12:105863654..105863682, + |
| 1.94e-87 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_15f3e6257442d9c35d9d2bb7a8cfb708 | p6@CLEC14A |
| 1.94e-87 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_15f3e6257442d9c35d9d2bb7a8cfb708 | p6@CLEC14A |
| 8.81e-87 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_d2c3c083703c5c16578c009242905552 | p5@CLEC14A |
| 8.81e-87 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_d2c3c083703c5c16578c009242905552 | p5@CLEC14A |
| 2.0e-86 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_1366f614473e3d9a32ea4b971262ef78 | p@chr18:33047157..33047168, - |
| 2.0e-86 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_1366f614473e3d9a32ea4b971262ef78 | p@chr18:33047157..33047168, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_ab2327fa167ab3045dff25e12b49065f | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_ab2327fa167ab3045dff25e12b49065f | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_ab2327fa167ab3045dff25e12b49065f | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_ab2327fa167ab3045dff25e12b49065f | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35945332..35945335, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_ab2327fa167ab3045dff25e12b49065f | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_ab2327fa167ab3045dff25e12b49065f | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_ab2327fa167ab3045dff25e12b49065f | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35094068..35094092, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_ab2327fa167ab3045dff25e12b49065f | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_ab2327fa167ab3045dff25e12b49065f | p@chr14:101778294..101778296, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_ab2327fa167ab3045dff25e12b49065f | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_ab2327fa167ab3045dff25e12b49065f | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_ab2327fa167ab3045dff25e12b49065f | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_ab2327fa167ab3045dff25e12b49065f | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_ab2327fa167ab3045dff25e12b49065f | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_ab2327fa167ab3045dff25e12b49065f | p@chr9:42915185..42915192, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_ab2327fa167ab3045dff25e12b49065f | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_ab2327fa167ab3045dff25e12b49065f | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_ab2327fa167ab3045dff25e12b49065f | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_ab2327fa167ab3045dff25e12b49065f | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_ab2327fa167ab3045dff25e12b49065f | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_ab2327fa167ab3045dff25e12b49065f | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_ab2327fa167ab3045dff25e12b49065f | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_ab2327fa167ab3045dff25e12b49065f | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_ab2327fa167ab3045dff25e12b49065f | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_ab2327fa167ab3045dff25e12b49065f | p@chr9:42915185..42915192, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_ab2327fa167ab3045dff25e12b49065f | p4@Pag1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_ab2327fa167ab3045dff25e12b49065f | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_ab2327fa167ab3045dff25e12b49065f | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_ab2327fa167ab3045dff25e12b49065f | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_ab2327fa167ab3045dff25e12b49065f | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_ab2327fa167ab3045dff25e12b49065f | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_ab2327fa167ab3045dff25e12b49065f | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_ab2327fa167ab3045dff25e12b49065f | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_ab2327fa167ab3045dff25e12b49065f | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_ab2327fa167ab3045dff25e12b49065f | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_ab2327fa167ab3045dff25e12b49065f | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_ab2327fa167ab3045dff25e12b49065f | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_ab2327fa167ab3045dff25e12b49065f | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_ab2327fa167ab3045dff25e12b49065f | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_ab2327fa167ab3045dff25e12b49065f | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_ab2327fa167ab3045dff25e12b49065f | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_ab2327fa167ab3045dff25e12b49065f | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_ab2327fa167ab3045dff25e12b49065f | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_ab2327fa167ab3045dff25e12b49065f | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_ab2327fa167ab3045dff25e12b49065f | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_ab2327fa167ab3045dff25e12b49065f | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_ab2327fa167ab3045dff25e12b49065f | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_ab2327fa167ab3045dff25e12b49065f | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_ab2327fa167ab3045dff25e12b49065f | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_ab2327fa167ab3045dff25e12b49065f | p@chr9:116223548..116223551, + |
