CL:0000067: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:24, 26 June 2012
| Name: | ciliated epithelial cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "An epithelial cell that has a cillia." [GOC:tfm] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000064(ciliated cell),CL:0000075(columnar/cuboidal epithelial cell) |
|---|
Children
| is a: | CL:0002304 (non-pigmented ciliary epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
Mouse (Mus musculus)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000067 (ciliated epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.93e-147 | FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_eccf1cbb159f4d45447936ed915500be | p@chr12:97856211..97856221, + |
| 8.93e-147 | FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_eccf1cbb159f4d45447936ed915500be | p@chr12:97856211..97856221, + |
| 7.78e-118 | FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_fe41b3959c09d57cef57b9c0956bdf6e | p@chr13:36052762..36052767, - |
| 7.78e-118 | FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_fe41b3959c09d57cef57b9c0956bdf6e | p5@SFRP1 |
| 7.78e-118 | FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_fe41b3959c09d57cef57b9c0956bdf6e | p@chr13:36052762..36052767, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_fe41b3959c09d57cef57b9c0956bdf6e | p5@SFRP1 |
| 2.59e-117 | FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_12faf7c4849aad2e33b1951b46512dc4 | p@chr16:58896129..58896134, - |
| 2.59e-117 | FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_12faf7c4849aad2e33b1951b46512dc4 | p@chrX:106198807..106198826, - |
| 2.59e-117 | FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_12faf7c4849aad2e33b1951b46512dc4 | p@chrX:106198807..106198826, - |
| 2.59e-117 | FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_12faf7c4849aad2e33b1951b46512dc4 | p@chr16:58896129..58896134, - |
| 4.06e-99 | FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_8a2f5595773555e2ac970094c2dbf0d0 | p33@PRKCH |
| 4.06e-99 | FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_8a2f5595773555e2ac970094c2dbf0d0 | p33@PRKCH |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_5265a70a032a89d641bce30b3cde3e24 | p2@RIPPLY1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_5265a70a032a89d641bce30b3cde3e24 | p2@RIPPLY1 |
| 6.24e-88 | FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_66a8cded2bdce02a545bb169eb07f5f3 | p@chr2:210798666..210798677, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_66a8cded2bdce02a545bb169eb07f5f3 | p@chr2:210798666..210798677, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_ddcb17fc8c392e8d702fe70179b6e8f7 | p@chr13:36052713..36052724, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_ddcb17fc8c392e8d702fe70179b6e8f7 | p@chr13:36052713..36052724, - |
| 4.06e-85 | FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_f0eb9fd599c2ba253c9b690ea8dac12c | p1@ENST00000526061 |
| 4.06e-85 | FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_f0eb9fd599c2ba253c9b690ea8dac12c | p1@ENST00000526061 |
| 9.61e-85 | FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_9a0f8f5142989e9b0224664c0eeec432 | p@chr10:91294399..91294401, - |
| 9.61e-85 | FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_9a0f8f5142989e9b0224664c0eeec432 | p@chr10:91294399..91294401, - |
| 1.28e-84 | FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_6fc9e43c08d4a66d294f37b419e89161 | p1@BC033145 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_6fc9e43c08d4a66d294f37b419e89161 | p1@BC033145 |
| 4.72e-75 | FFCP PHASE1:Hg19::chr2:45166478..45166502,-#_b26e4981fe70dd5a06cc82d2b8711730 | p3@ENST00000437916 |
| 4.72e-75 | FFCP PHASE2:Hg19::chr2:45166478..45166502,-#_b26e4981fe70dd5a06cc82d2b8711730 | p3@ENST00000437916 |
| 1.66e-74 | FFCP PHASE1:Hg19::chr8:94713146..94713159,+#_d291c992b8851932a9b2d81bc1d7eecd | p8@FAM92A1 |
| 1.66e-74 | FFCP PHASE2:Hg19::chr8:94713146..94713159,+#_d291c992b8851932a9b2d81bc1d7eecd | p8@FAM92A1 |
| 2.75e-74 | FFCP PHASE1:Hg19::chr4:183006122..183006131,-#_5d775a3cd578992667f019a5fcdc8b75 | p3@ENST00000505537 |
| 2.75e-74 | FFCP PHASE2:Hg19::chr4:183006122..183006131,-#_5d775a3cd578992667f019a5fcdc8b75 | p3@ENST00000505537 |
| 7.85e-67 | FFCP PHASE2:Hg19::chr3:110846331..110846333,+#_3c49f1e69769d3a314996a3e32b9215c | p@chr3:110846331..110846333, + |
| 7.85e-67 | FFCP PHASE1:Hg19::chr3:110846331..110846333,+#_3c49f1e69769d3a314996a3e32b9215c | p@chr3:110846331..110846333, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr2:237677787..237677800,+#_6ea6a56974226790ecfa0bfeba6a4be9 | p@chr2:237677787..237677800, + |
| 9.82e-67 | FFCP PHASE2:Hg19::chr2:237677787..237677800,+#_6ea6a56974226790ecfa0bfeba6a4be9 | p@chr2:237677787..237677800, + |
| 1.54e-66 | FFCP PHASE2:Hg19::chr11:89224826..89224839,-#_b991d7d5a5790bfa8b6791637c29da78 | p14@NOX4 |
| 1.54e-66 | FFCP PHASE1:Hg19::chr11:89224826..89224839,-#_b991d7d5a5790bfa8b6791637c29da78 | p14@NOX4 |
| 1.71e-66 | FFCP PHASE2:Hg19::chr1:218579326..218579337,+#_cab83b01c0d7dbf2543c66fe8d971942 | p@chr1:218579326..218579337, + |
| 1.71e-66 | FFCP PHASE1:Hg19::chr1:218579326..218579337,+#_cab83b01c0d7dbf2543c66fe8d971942 | p@chr1:218579326..218579337, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:30716539..30716546,+#_53213fa07a3dd789963473149055124d | p@chr19:30716539..30716546, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:63196015..63196016,+#_53213fa07a3dd789963473149055124d | p@chr2:63196015..63196016, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:30716539..30716546,+#_53213fa07a3dd789963473149055124d | p@chr19:30716539..30716546, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:63196015..63196016,+#_53213fa07a3dd789963473149055124d | p@chr2:63196015..63196016, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_1c103dcc2d025f02dc2cffb382b60e90 | p@chr7:115723897..115723915, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_1c103dcc2d025f02dc2cffb382b60e90 | p@chr7:115723897..115723915, - |
| 2.41e-66 | FFCP PHASE1:Hg19::chr3:139258648..139258667,+#_32da30241ff1adbbf5bc59c93cf070bf | p1@ENST00000381790 |
| 2.41e-66 | FFCP PHASE2:Hg19::chr3:139258648..139258667,+#_32da30241ff1adbbf5bc59c93cf070bf | p1@ENST00000381790 |
| 3.35e-66 | FFCP PHASE2:Hg19::chr15:79501729..79501736,+#_bbe9b36cc1882d99d48c8ed28ede18d0 | p1@MIR184 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr15:79501729..79501736,+#_bbe9b36cc1882d99d48c8ed28ede18d0 | p1@MIR184 |
| 4.68e-66 | FFCP PHASE1:Hg19::chr3:50191610..50191612,-#_bd0df96573fb2f68ec0ffaf6ea2bb495 | p@chr3:50191610..50191612, - |
| 4.68e-66 | FFCP PHASE2:Hg19::chr3:50191610..50191612,-#_bd0df96573fb2f68ec0ffaf6ea2bb495 | p@chr3:50191610..50191612, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chr1:12416343..12416350,+#_ac309c257b6197c756b614883964264c | p@chr1:12416343..12416350, + |
| 6.53e-66 | FFCP PHASE1:Hg19::chrX:106142727..106142730,-#_ac309c257b6197c756b614883964264c | p@chrX:106142727..106142730, - |
| 6.53e-66 | FFCP PHASE2:Hg19::chrX:106142727..106142730,-#_ac309c257b6197c756b614883964264c | p@chrX:106142727..106142730, - |
| 6.53e-66 | FFCP PHASE2:Hg19::chr1:12416343..12416350,+#_ac309c257b6197c756b614883964264c | p@chr1:12416343..12416350, + |
| 2.43e-60 | FFCP PHASE1:Hg19::chr5:31235359..31235362,+#_90946aa60f3d9d17f3474b2954e03fce | p@chr5:31235359..31235362, + |
| 2.43e-60 | FFCP PHASE2:Hg19::chr5:31235359..31235362,+#_90946aa60f3d9d17f3474b2954e03fce | p@chr5:31235359..31235362, + |
| 8.17e-60 | FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_5a2954728c9d69003b803a0f368bb364 | p1@CLRN1 |
| 8.17e-60 | FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_5a2954728c9d69003b803a0f368bb364 | p1@CLRN1 |
| 2.73e-59 | FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_9f170ff630515fee3c13b5624bd091db | p@chr8:124692287..124692298, + |
| 2.73e-59 | FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_9f170ff630515fee3c13b5624bd091db | p@chr8:124692287..124692298, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr3:110888243..110888248,+#_f5dbf76585633218c569f3dacf1d48f6 | p@chr3:110888243..110888248, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_f5dbf76585633218c569f3dacf1d48f6 | p30@PRKCH |
| 2.4e-55 | FFCP PHASE2:Hg19::chr3:110888243..110888248,+#_f5dbf76585633218c569f3dacf1d48f6 | p@chr3:110888243..110888248, + |
| 2.4e-55 | FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_f5dbf76585633218c569f3dacf1d48f6 | p30@PRKCH |
| 7.24e-55 | FFCP PHASE1:Hg19::chr14:60975914..60975925,+#_fc976f6b42b10f56840a917c004490ee | p5@SIX6 |
| 7.24e-55 | FFCP PHASE2:Hg19::chr14:60975914..60975925,+#_fc976f6b42b10f56840a917c004490ee | p5@SIX6 |
| 1.25e-54 | FFCP PHASE2:Hg19::chr14:60981789..60981803,+#_65d4862087bc05bbb76d1f500e02f9ce | p1@ENST00000557618 |
| 1.25e-54 | FFCP PHASE1:Hg19::chr14:60981789..60981803,+#_65d4862087bc05bbb76d1f500e02f9ce | p1@ENST00000557618 |
| 3.76e-54 | FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_aaf829a5ff34ece438c4684f9e9afb01 | p1@ENST00000456467 |
| 3.76e-54 | FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_aaf829a5ff34ece438c4684f9e9afb01 | p1@ENST00000456467 |
| 1.68e-53 | FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_6fa96b69958761fb643c0b210a381f8e | p@chr7:115723925..115723935, - |
| 1.68e-53 | FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_6fa96b69958761fb643c0b210a381f8e | p@chr7:115723925..115723935, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr11:31671561..31671580,+#_f8460203be12367f5e0bae20eb39f15c | p@chr11:31671561..31671580, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr4:169623845..169623853,+#_f8460203be12367f5e0bae20eb39f15c | p@chr4:169623845..169623853, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_f8460203be12367f5e0bae20eb39f15c | p@chr2:35680607..35680613, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr4:169623845..169623853,+#_f8460203be12367f5e0bae20eb39f15c | p@chr4:169623845..169623853, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr11:31671561..31671580,+#_f8460203be12367f5e0bae20eb39f15c | p@chr11:31671561..31671580, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_f8460203be12367f5e0bae20eb39f15c | p@chr2:35680607..35680613, - |
| 6.39e-53 | FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_4cd8fbb066a8e6d41cef4c3ada40aae6 | p@chr7:131803806..131803815, + |
| 6.39e-53 | FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_4cd8fbb066a8e6d41cef4c3ada40aae6 | p@chr7:131803806..131803815, + |
| 1.14e-50 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_5ef274b66e8bdcc20e8f43561962cf1e | p7@PTPRU |
| 1.14e-50 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_5ef274b66e8bdcc20e8f43561962cf1e | p7@PTPRU |
| 1.89e-50 | FFCP PHASE1:Hg19::chr13:94028319..94028321,+#_96950bf87b6ab251f734d8a4497c094f | p@chr13:94028319..94028321, + |
| 1.89e-50 | FFCP PHASE2:Hg19::chr13:94028319..94028321,+#_96950bf87b6ab251f734d8a4497c094f | p@chr13:94028319..94028321, + |
| 4.05e-47 | FFCP PHASE1:Hg19::chr10:103990396..103990405,+#_9abfa153340c79102f5a48da8a1378c3 | p@chr10:103990396..103990405, + |
| 4.05e-47 | FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_9abfa153340c79102f5a48da8a1378c3 | p@chr2:66670833..66670853, + |
| 4.05e-47 | FFCP PHASE1:Hg19::chr11:2973356..2973367,-#_9abfa153340c79102f5a48da8a1378c3 | p11@NAP1L4 |
| 4.05e-47 | FFCP PHASE2:Hg19::chr10:103990396..103990405,+#_9abfa153340c79102f5a48da8a1378c3 | p@chr10:103990396..103990405, + |
| 4.05e-47 | FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_9abfa153340c79102f5a48da8a1378c3 | p@chr2:66670833..66670853, + |
| 4.05e-47 | FFCP PHASE2:Hg19::chr11:2973356..2973367,-#_9abfa153340c79102f5a48da8a1378c3 | p11@NAP1L4 |
| 8.84e-47 | FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_8ae8a18d2fcba47aa50fd68532136fce | p3@SIX6 |
| 8.84e-47 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_8ae8a18d2fcba47aa50fd68532136fce | p1@RIPPLY1 |
| 8.84e-47 | FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_8ae8a18d2fcba47aa50fd68532136fce | p3@SIX6 |
| 8.84e-47 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_8ae8a18d2fcba47aa50fd68532136fce | p1@RIPPLY1 |
| 1.21e-46 | FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_2e0fb25cac57355d5a690c15348f5aea | p1@OPTC |
| 1.21e-46 | FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_2e0fb25cac57355d5a690c15348f5aea | p4@SIX6 |
| 1.21e-46 | FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_2e0fb25cac57355d5a690c15348f5aea | p4@SIX6 |
| 1.21e-46 | FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_2e0fb25cac57355d5a690c15348f5aea | p1@OPTC |
| 4.17e-46 | FFCP PHASE2:Hg19::chr13:36050976..36050990,+#_deb8b53a8bf2d9215198a0d859fb9255 | p8@NBEA |
| 4.17e-46 | FFCP PHASE1:Hg19::chr13:36050976..36050990,+#_deb8b53a8bf2d9215198a0d859fb9255 | p8@NBEA |
