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{{UBERON
{{UBERON
|id=UBERON:0009617
|id=UBERON:0009617
|name=head paraxial mesenchyme
|name=head paraxial mesoderm
|namespace=
|namespace=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|xref=EHDAA:364;;EHDAA2:0000736;;EMAPA:16171
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
|is_a=UBERON:0003104;;UBERON:0005256;;UBERON:0005291
|is_a=UBERON:0003104;;UBERON:0004120;;UBERON:0005291
|synonym="cephalic paraxial mesenchyme" EXACT [UBERON:cjm];;"cephalic paraxial mesoderm" EXACT [UBERON:cjm]
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|comment=
|comment=
|alt_id=
|alt_id=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0000926
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0003077;;UBERON:0005253
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:08, 26 June 2012

Name:head paraxial mesoderm
Definition:"Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
Xrefs:
links:

EHDAA2:0000736
EHDAA:364

EMAPA:16171
Synonyms: "cephalic paraxial mesoderm" EXACT [UBERON:cjm]
"head paraxial mesenchyme" EXACT [EHDAA2:0000736]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003104(mesenchyme),UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue)



Children

develops from:UBERON:0004761 (cartilaginous neurocranium),UBERON:0007647 (ectomeninx)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009617 (head paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c6d67655ae3e8e9acffeefba96516e6ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:75320183..75320189, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_c6d67655ae3e8e9acffeefba96516e6ap6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_c6d67655ae3e8e9acffeefba96516e6ap7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_c6d67655ae3e8e9acffeefba96516e6ap11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c6d67655ae3e8e9acffeefba96516e6ap11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_c6d67655ae3e8e9acffeefba96516e6ap5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c6d67655ae3e8e9acffeefba96516e6ap41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c6d67655ae3e8e9acffeefba96516e6ap6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c6d67655ae3e8e9acffeefba96516e6ap12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207397..42207408, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257454..78257465, +
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c6d67655ae3e8e9acffeefba96516e6ap@chrX:154140781..154140788, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Otog
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459246..154459253, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_c6d67655ae3e8e9acffeefba96516e6ap9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_c6d67655ae3e8e9acffeefba96516e6ap7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c6d67655ae3e8e9acffeefba96516e6ap9@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_c6d67655ae3e8e9acffeefba96516e6ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Strc
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_c6d67655ae3e8e9acffeefba96516e6ap9@Otof
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_c6d67655ae3e8e9acffeefba96516e6ap2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c6d67655ae3e8e9acffeefba96516e6ap3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42206730..42206739, -
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:3909290..3909299, +
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:4689776..4689785, -

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