UBERON:0005729: Difference between revisions
From FANTOM5_SSTAR
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|namespace= | |namespace= | ||
|def= | |def= | ||
|xref=ZFA:0001453 | |xref=TAO:0001453;;ZFA:0001453 | ||
|is_a=UBERON:0005732 | |is_a=UBERON:0005732 | ||
|synonym="pectoral fin field" NARROW SENSU [ZFA:0001453] | |synonym="pectoral fin field" NARROW SENSU [ZFA:0001453] | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Embryonic region that develops into the pectoral fin bud.[TAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 17:06, 26 June 2012
| Name: | forelimb/pectoral fin field | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: | "pectoral fin field" NARROW SENSU [ZFA:0001453] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005732(limb/fin field) |
|---|
Children
| develops from: | UBERON:0005419 (pectoral appendage bud) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005729 (forelimb/pectoral fin field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.33e-86 | FFCP PHASE2:Mm9::chr2:74499300..74499309,-#_796db4672cb3506cc6dece42b9963344 | p5@Evx2 |
| 1.33e-86 | FFCP PHASE1:Mm9::chr2:74499300..74499309,-#_796db4672cb3506cc6dece42b9963344 | p5@Evx2 |
| 2.4e-74 | FFCP PHASE1:Mm9::chr2:165983686..165983720,-#_ccbf7c38c665da4c4dfc02f1e69c78b9 | p@chr2:165983686..165983720, - |
| 2.4e-74 | FFCP PHASE2:Mm9::chr5:120256413..120256428,-#_ccbf7c38c665da4c4dfc02f1e69c78b9 | p@chr5:120256413..120256428, - |
| 2.4e-74 | FFCP PHASE1:Mm9::chr5:120256413..120256428,-#_ccbf7c38c665da4c4dfc02f1e69c78b9 | p@chr5:120256413..120256428, - |
| 2.4e-74 | FFCP PHASE2:Mm9::chr15:51484092..51484121,-#_ccbf7c38c665da4c4dfc02f1e69c78b9 | p@chr15:51484092..51484121, - |
| 2.4e-74 | FFCP PHASE2:Mm9::chr2:165983686..165983720,-#_ccbf7c38c665da4c4dfc02f1e69c78b9 | p@chr2:165983686..165983720, - |
| 2.4e-74 | FFCP PHASE1:Mm9::chr15:51484092..51484121,-#_ccbf7c38c665da4c4dfc02f1e69c78b9 | p@chr15:51484092..51484121, - |
| 1.21e-61 | FFCP PHASE2:Mm9::chr2:74505324..74505330,+#_f413be44e81254f074788e4527bbb0d2 | p@chr2:74505324..74505330, + |
| 1.21e-61 | FFCP PHASE1:Mm9::chr2:74505324..74505330,+#_f413be44e81254f074788e4527bbb0d2 | p@chr2:74505324..74505330, + |
| 2.24e-61 | FFCP PHASE1:Mm9::chr2:74506264..74506286,+#_2341e42ee1dbd0fb27dc774902db96e0 | p1@Hoxd13 |
| 2.24e-61 | FFCP PHASE2:Mm9::chr2:74506264..74506286,+#_2341e42ee1dbd0fb27dc774902db96e0 | p1@Hoxd13 |
| 3.63e-52 | FFCP PHASE2:Mm9::chr2:74513064..74513089,+#_22527605b086300f2a6080ae9bee2cac | p2@Hoxd12 |
| 3.63e-52 | FFCP PHASE1:Mm9::chr2:74513064..74513089,+#_22527605b086300f2a6080ae9bee2cac | p2@Hoxd12 |
| 4.62e-52 | FFCP PHASE1:Mm9::chr2:74499251..74499258,-#_ac58d91f9cbf13493efe9d44d806b6d5 | p4@Evx2 |
| 4.62e-52 | FFCP PHASE2:Mm9::chr2:74499251..74499258,-#_ac58d91f9cbf13493efe9d44d806b6d5 | p4@Evx2 |
| 5.88e-52 | FFCP PHASE2:Mm9::chr2:33574246..33574257,-#_2659bb9dba3a17a9ed783f2ade04b859 | p3@ENSMUST00000130532 |
| 5.88e-52 | FFCP PHASE1:Mm9::chr2:33574246..33574257,-#_2659bb9dba3a17a9ed783f2ade04b859 | p3@ENSMUST00000130532 |
| 5.28e-50 | FFCP PHASE2:Mm9::chr2:74521516..74521525,+#_2ebf4eb77d6eaaa0ad80551efd4e084c | p1@ENSMUST00000136302 |
| 5.28e-50 | FFCP PHASE1:Mm9::chr2:74521516..74521525,+#_2ebf4eb77d6eaaa0ad80551efd4e084c | p1@ENSMUST00000136302 |
| 9.21e-50 | FFCP PHASE1:Mm9::chr6:51009701..51009744,-#_8ccfe8879a1061e7120cb23a631aa192 | p@chr6:51009701..51009744, - |
| 9.21e-50 | FFCP PHASE2:Mm9::chr6:51009701..51009744,-#_8ccfe8879a1061e7120cb23a631aa192 | p@chr6:51009701..51009744, - |
| 2.92e-48 | FFCP PHASE1:Mm9::chr10:97069737..97069749,+#_c57ff157929ee29db472aa2ced7b3ab6 | p5@Kera |
| 2.92e-48 | FFCP PHASE2:Mm9::chr10:97069737..97069749,+#_c57ff157929ee29db472aa2ced7b3ab6 | p5@Kera |
| 4.71e-48 | FFCP PHASE2:Mm9::chr6:52210816..52210831,-#_96063380ab29e3bb5a181ea41e983af2 | p2@Hoxa13 |
| 4.71e-48 | FFCP PHASE1:Mm9::chr6:52210816..52210831,-#_96063380ab29e3bb5a181ea41e983af2 | p2@Hoxa13 |
| 6.47e-48 | FFCP PHASE2:Mm9::chr2:74513149..74513159,+#_ebcd98b320f67aa43ff865f22afa9766 | p@chr2:74513149..74513159, + |
| 6.47e-48 | FFCP PHASE1:Mm9::chr2:74513149..74513159,+#_ebcd98b320f67aa43ff865f22afa9766 | p@chr2:74513149..74513159, + |
| 1.4e-44 | FFCP PHASE2:Mm9::chr1:165288513..165288518,+#_3f523a022ec8cb75852cbad68f0c1667 | p@chr1:165288513..165288518, + |
| 1.4e-44 | FFCP PHASE1:Mm9::chr1:165288513..165288518,+#_3f523a022ec8cb75852cbad68f0c1667 | p@chr1:165288513..165288518, + |
| 2.07e-41 | FFCP PHASE2:Mm9::chr1:164064835..164064864,-#_5a9c5d5963be7745a8305be474470a05 | p3@Dnm3 |
| 2.07e-41 | FFCP PHASE1:Mm9::chr1:164064835..164064864,-#_5a9c5d5963be7745a8305be474470a05 | p3@Dnm3 |
| 2.91e-40 | FFCP PHASE2:Mm9::chr2:33574267..33574279,-#_ec4428332f566d0f79935b272d80b387 | p1@ENSMUST00000130532 |
| 2.91e-40 | FFCP PHASE1:Mm9::chr2:33574267..33574279,-#_ec4428332f566d0f79935b272d80b387 | p1@ENSMUST00000130532 |
| 3.67e-40 | FFCP PHASE2:Mm9::chr2:33574309..33574319,-#_3525d98f9104699da233ed4e818affd8 | p4@ENSMUST00000130532 |
| 3.67e-40 | FFCP PHASE1:Mm9::chr2:33574309..33574319,-#_3525d98f9104699da233ed4e818affd8 | p4@ENSMUST00000130532 |
| 5.46e-39 | FFCP PHASE2:Mm9::chr6:52195000..52195013,+#_409a6455bb03cbc4b8a9c5f4553cdaaf | p3@Hoxa11as |
| 5.46e-39 | FFCP PHASE1:Mm9::chr6:52195000..52195013,+#_409a6455bb03cbc4b8a9c5f4553cdaaf | p3@Hoxa11as |
| 6.59e-38 | FFCP PHASE1:Mm9::chr2:74512009..74512012,+#_792a1413e14cdef7cf687e5c8973cae7 | p@chr2:74512009..74512012, + |
| 6.59e-38 | FFCP PHASE2:Mm9::chr2:74512009..74512012,+#_792a1413e14cdef7cf687e5c8973cae7 | p@chr2:74512009..74512012, + |
| 1.94e-35 | FFCP PHASE1:Mm9::chr2:33496847..33496857,+#_b8f072728f3db38ab95468d09f240a84 | p3@ENSMUST00000147294, p3@uc008jia.1 |
| 1.94e-35 | FFCP PHASE2:Mm9::chr2:33496847..33496857,+#_b8f072728f3db38ab95468d09f240a84 | p3@ENSMUST00000147294, p3@uc008jia.1 |
| 9.74e-35 | FFCP PHASE2:Mm9::chr13:89680110..89680115,+#_513a65975bad188b24ecd96a45d2d056 | p6@Hapln1 |
| 9.74e-35 | FFCP PHASE1:Mm9::chr13:89680110..89680115,+#_513a65975bad188b24ecd96a45d2d056 | p6@Hapln1 |
| 2.95e-34 | FFCP PHASE2:Mm9::chr9:96754986..96754989,-#_47eaff4c3d7bfa26d810072c1533d594 | p3@Acpl2 |
| 2.95e-34 | FFCP PHASE1:Mm9::chr9:96754986..96754989,-#_47eaff4c3d7bfa26d810072c1533d594 | p3@Acpl2 |
| 6.28e-34 | FFCP PHASE2:Mm9::chr8:23734491..23734495,+#_e582814e14276f143dfea2abb8cae021 | p1@Dkk4 |
| 6.28e-34 | FFCP PHASE1:Mm9::chr8:23734491..23734495,+#_e582814e14276f143dfea2abb8cae021 | p1@Dkk4 |
| 7.62e-34 | FFCP PHASE2:Mm9::chr2:155770985..155770995,-#_65d387632868d980295427060358f195 | p2@Gdf5 |
| 7.62e-34 | FFCP PHASE1:Mm9::chr2:155770985..155770995,-#_65d387632868d980295427060358f195 | p2@Gdf5 |
| 2.0e-33 | FFCP PHASE1:Mm9::chr18:80910310..80910329,-#_e62a1c7a28743552e9cc871206f1d5d6 | p@chr18:80910310..80910329, - |
| 2.0e-33 | FFCP PHASE2:Mm9::chr18:80910310..80910329,-#_e62a1c7a28743552e9cc871206f1d5d6 | p@chr18:80910310..80910329, - |
| 1.89e-32 | FFCP PHASE2:Mm9::chr6:52210774..52210787,-#_cbc1c0f8ac7676ce7abf88c3ff394d7f | p1@Hoxa13 |
| 1.89e-32 | FFCP PHASE1:Mm9::chr6:52210774..52210787,-#_cbc1c0f8ac7676ce7abf88c3ff394d7f | p1@Hoxa13 |
| 6.43e-32 | FFCP PHASE2:Mm9::chr2:33498116..33498124,+#_1aa813453b34c1ce9b0f0feedc4eae68 | p@chr2:33498116..33498124, + |
| 6.43e-32 | FFCP PHASE1:Mm9::chr2:33498116..33498124,+#_1aa813453b34c1ce9b0f0feedc4eae68 | p@chr2:33498116..33498124, + |
| 7.44e-32 | FFCP PHASE2:Mm9::chr2:33496574..33496588,+#_ee1c1ccbcaf7a80551f0ad91db845bd5 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
| 7.44e-32 | FFCP PHASE1:Mm9::chr2:33496574..33496588,+#_ee1c1ccbcaf7a80551f0ad91db845bd5 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
| 1.09e-30 | FFCP PHASE1:Mm9::chr2:74520075..74520087,+#_114205f2f033accc63693fd19cbd9762 | p6@Hoxd11 |
| 1.09e-30 | FFCP PHASE2:Mm9::chr2:74520075..74520087,+#_114205f2f033accc63693fd19cbd9762 | p6@Hoxd11 |
| 2.22e-30 | FFCP PHASE2:Mm9::chr12:34649201..34649205,+#_d1fa8f1e479d51f4ca2bbc652e571417 | p@chr12:34649201..34649205, + |
| 2.22e-30 | FFCP PHASE1:Mm9::chr12:34649201..34649205,+#_d1fa8f1e479d51f4ca2bbc652e571417 | p@chr12:34649201..34649205, + |
| 1.6e-29 | FFCP PHASE2:Mm9::chr5:120285104..120285113,+#_96943e3436279d52d2427854795e9a11 | p5@Tbx5 |
| 1.6e-29 | FFCP PHASE1:Mm9::chr5:120285104..120285113,+#_96943e3436279d52d2427854795e9a11 | p5@Tbx5 |
| 4.13e-29 | FFCP PHASE2:Mm9::chr5:120246556..120246565,+#_854edb8bf793110d3951a551dc5ff7fe | p@chr5:120246556..120246565, + |
| 4.13e-29 | FFCP PHASE1:Mm9::chr5:120246556..120246565,+#_854edb8bf793110d3951a551dc5ff7fe | p@chr5:120246556..120246565, + |
| 4.91e-29 | FFCP PHASE2:Mm9::chr5:120246522..120246553,+#_df4c8d178a52780ab38e4f7f3920a3e7 | p@chr5:120246522..120246553, + |
| 4.91e-29 | FFCP PHASE1:Mm9::chr5:120246522..120246553,+#_df4c8d178a52780ab38e4f7f3920a3e7 | p@chr5:120246522..120246553, + |
| 5.59e-29 | FFCP PHASE2:Mm9::chr16:77329743..77329754,+#_10c8442e298a0495facd321c02e09636 | p14@2810055G20Rik |
| 5.59e-29 | FFCP PHASE1:Mm9::chr16:77329743..77329754,+#_10c8442e298a0495facd321c02e09636 | p14@2810055G20Rik |
| 8.27e-29 | FFCP PHASE1:Mm9::chr3:29912310..29912321,-#_1a31b6f0dee593ecf506326ed653f0b9 | p23@Mecom |
| 8.27e-29 | FFCP PHASE2:Mm9::chr3:29912310..29912321,-#_1a31b6f0dee593ecf506326ed653f0b9 | p23@Mecom |
| 6.5e-28 | FFCP PHASE2:Mm9::chr3:99044251..99044260,+#_aa887f8bab030ae4d0cd079fac79b239 | p8@Tbx15 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr3:99044251..99044260,+#_aa887f8bab030ae4d0cd079fac79b239 | p8@Tbx15 |
| 3.95e-27 | FFCP PHASE2:Mm9::chr15:97807283..97807309,-#_7baa5896517d91f0a09d49bb8b065d07 | p@chr15:97807283..97807309, - |
| 3.95e-27 | FFCP PHASE1:Mm9::chr15:97807283..97807309,-#_7baa5896517d91f0a09d49bb8b065d07 | p@chr15:97807283..97807309, - |
| 5.23e-27 | FFCP PHASE2:Mm9::chr1:165244244..165244254,-#_5ad3bbbd6b76a83b994b2e50957b7a4e | p8@Prrx1 |
| 5.23e-27 | FFCP PHASE1:Mm9::chr1:165244244..165244254,-#_5ad3bbbd6b76a83b994b2e50957b7a4e | p8@Prrx1 |
| 1.4e-26 | FFCP PHASE1:Mm9::chr5:42155277..42155281,-#_1f8b18a059cde51dea3baa3d7ebd01b9 | p2@Nkx3-2 |
| 1.4e-26 | FFCP PHASE2:Mm9::chr5:42155277..42155281,-#_1f8b18a059cde51dea3baa3d7ebd01b9 | p2@Nkx3-2 |
| 1.64e-26 | FFCP PHASE1:Mm9::chr16:95807232..95807250,-#_7b7789c3c956d7aff5567210385bc183 | p@chr16:95807232..95807250, - |
| 1.64e-26 | FFCP PHASE2:Mm9::chr16:95807232..95807250,-#_7b7789c3c956d7aff5567210385bc183 | p@chr16:95807232..95807250, - |
| 7.57e-26 | FFCP PHASE2:Mm9::chr4:125973415..125973418,+#_95e217adb3a18c35504a73792a897ecb | p@chr4:125973415..125973418, + |
| 7.57e-26 | FFCP PHASE2:Mm9::chr3:37606335..37606337,-#_95e217adb3a18c35504a73792a897ecb | p@chr3:37606335..37606337, - |
| 7.57e-26 | FFCP PHASE1:Mm9::chr3:37606335..37606337,-#_95e217adb3a18c35504a73792a897ecb | p@chr3:37606335..37606337, - |
| 7.57e-26 | FFCP PHASE1:Mm9::chr3:86116124..86116132,+#_95e217adb3a18c35504a73792a897ecb | p@chr3:86116124..86116132, + |
| 7.57e-26 | FFCP PHASE1:Mm9::chr4:125973415..125973418,+#_95e217adb3a18c35504a73792a897ecb | p@chr4:125973415..125973418, + |
| 7.57e-26 | FFCP PHASE2:Mm9::chr3:86116124..86116132,+#_95e217adb3a18c35504a73792a897ecb | p@chr3:86116124..86116132, + |
| 1.07e-25 | FFCP PHASE1:Mm9::chr17:68300324..68300336,-#_622694500276868d8555a130c09c0774 | p5@Arhgap28 |
| 1.07e-25 | FFCP PHASE2:Mm9::chr17:68300324..68300336,-#_622694500276868d8555a130c09c0774 | p5@Arhgap28 |
| 2.33e-25 | FFCP PHASE1:Mm9::chr7:75096968..75096978,+#_2017bada5cb3ede628b5db0fa0654186 | p9@Igf1r |
| 2.33e-25 | FFCP PHASE2:Mm9::chr7:75096968..75096978,+#_2017bada5cb3ede628b5db0fa0654186 | p9@Igf1r |
| 2.93e-25 | FFCP PHASE2:Mm9::chr15:101936581..101936594,+#_7e44ba20457e46752e72d6168551d559 | p@chr15:101936581..101936594, + |
| 2.93e-25 | FFCP PHASE1:Mm9::chr15:101936581..101936594,+#_7e44ba20457e46752e72d6168551d559 | p@chr15:101936581..101936594, + |
| 2.99e-25 | FFCP PHASE2:Mm9::chr17:23882313..23882330,-#_3099cfb78926f581a9690a8039ec55a5 | p@chr17:23882313..23882330, - |
| 2.99e-25 | FFCP PHASE1:Mm9::chr17:23882313..23882330,-#_3099cfb78926f581a9690a8039ec55a5 | p@chr17:23882313..23882330, - |
| 3.52e-25 | FFCP PHASE1:Mm9::chr2:155771018..155771042,-#_ac14d0d28554a41043b7ab3464ecd74f | p1@Gdf5 |
| 3.52e-25 | FFCP PHASE2:Mm9::chr2:155771018..155771042,-#_ac14d0d28554a41043b7ab3464ecd74f | p1@Gdf5 |
| 2.77e-24 | FFCP PHASE2:Mm9::chr15:77137392..77137399,-#_2868125d5f8d460e2a83fbd2a6fcf022 | p16@Rbfox2 |
| 2.77e-24 | FFCP PHASE1:Mm9::chr15:77137392..77137399,-#_2868125d5f8d460e2a83fbd2a6fcf022 | p16@Rbfox2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Embryonic region that develops into the pectoral fin bud.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
