UBERON:0004875: Difference between revisions
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|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | |xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | ||
|is_a=UBERON:0005423 | |is_a=UBERON:0005423 | ||
|synonym= | |synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
|comment=part_of or develops_from urogenital ridge? | |comment=part_of or develops_from urogenital ridge? | ||
|alt_id= | |alt_id= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:05, 26 June 2012
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:17224952..17224968, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_2c808356ccd804cd36d69a04f78b05be | p@chr4:138824620..138824627, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141482..19141496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_2c808356ccd804cd36d69a04f78b05be | p15@Wars |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379454..31379466, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:25706249..25706254, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379430..21379437, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_2c808356ccd804cd36d69a04f78b05be | p9@Tecta |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:54678902..54678911, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:164479326..164479336, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:34107586..34107593, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:156776465..156776473,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:156776465..156776473, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280152..50280179, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:110773718..110773729, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75329148..75329155, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26688157..26688159, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_2c808356ccd804cd36d69a04f78b05be | p3@Acad8 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:35930667..35930691, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_2c808356ccd804cd36d69a04f78b05be | p@chr19:17591760..17591765, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_2c808356ccd804cd36d69a04f78b05be | p3@Ntsr2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155722..90155743, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378927..21378932, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_2c808356ccd804cd36d69a04f78b05be | p3@Ntsr2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_2c808356ccd804cd36d69a04f78b05be | p3@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_2c808356ccd804cd36d69a04f78b05be | p@chr4:138824620..138824627, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:22547027..22547063, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379306..21379315, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_2c808356ccd804cd36d69a04f78b05be | p6@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:14306714..14306740, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_2c808356ccd804cd36d69a04f78b05be | p@chr12:103896072..103896081, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:75798157..75798162, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496372..130496393, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155951..90155962, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155697874..155697885, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379430..21379437, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:23308182..23308185, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:70761931..70761971, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26719400..26719404, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_2c808356ccd804cd36d69a04f78b05be | p@chr5:77645280..77645295, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:96014490..96014496, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_2c808356ccd804cd36d69a04f78b05be | p11@Wars |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597818..89597827, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:126591032..126591039, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:23045782..23045791, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:34107586..34107593, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379159..21379162, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379845..31379855, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75304916..75304925, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_2c808356ccd804cd36d69a04f78b05be | p2@ENSMUST00000152401 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_2c808356ccd804cd36d69a04f78b05be | p9@Tecta |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_2c808356ccd804cd36d69a04f78b05be | p5@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597660..89597668, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:83143938..83143953, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:63611303..63611312, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_2c808356ccd804cd36d69a04f78b05be | p4@Bpi |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:36016859..36016897, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101958855..101958871,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101958855..101958871, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:100350777..100350782, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:12571771..12571780, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:160573108..160573123, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:148445639..148445665,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:148445639..148445665, + |
