FFCP PHASE1:Hg19::chr12:57623963..57623989,+: Difference between revisions
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|id=chr12:57623963..57623989,+ | |id=chr12:57623963..57623989,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.86e-30!679;CL:0000004!1.86e-30!679;CL:0000255!1.86e-30!679;CL:0000012!3.37e-29!682;CL:0000144!5.57e-21!625;CL:0002371!3.19e-18!591;CL:0000003!1.60e-17!722;CL:0000063!1.86e-17!578;CL:0000055!8.20e-17!180;CL:0000057!1.67e-12!75;CL:0002321!4.66e-12!248;CL:0000220!5.08e-12!246;CL:0000066!4.41e-11!254;CL:0000222!4.57e-10!119;CL:0000048!9.03e-07!430;CL:0000359!9.87e-07!32 | |ontology_enrichment_celltype=CL:0000548!1.86e-30!679;CL:0000004!1.86e-30!679;CL:0000255!1.86e-30!679;CL:0000012!3.37e-29!682;CL:0000144!5.57e-21!625;CL:0002371!3.19e-18!591;CL:0000003!1.60e-17!722;CL:0000063!1.86e-17!578;CL:0000055!8.20e-17!180;CL:0000057!1.67e-12!75;CL:0002321!4.66e-12!248;CL:0000220!5.08e-12!246;CL:0000066!4.41e-11!254;CL:0000222!4.57e-10!119;CL:0000048!9.03e-07!430;CL:0000359!9.87e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.35e-07;32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.95e-11!84;UBERON:0000055!3.18e-11!69;UBERON:0001981!1.11e-10!60;UBERON:0007500!1.11e-10!60;UBERON:0004537!1.11e-10!60;UBERON:0006965!1.11e-10!60;UBERON:0002049!2.07e-10!79;UBERON:0007798!2.07e-10!79;UBERON:0003914!3.12e-10!118;UBERON:0001637!9.65e-10!42;UBERON:0003509!9.65e-10!42;UBERON:0004572!9.65e-10!42;UBERON:0000490!1.41e-08!138;UBERON:0004573!9.83e-08!33;UBERON:0004571!9.83e-08!33;UBERON:0002100!1.75e-07!216;UBERON:0004535!2.80e-07!110 | |ontology_enrichment_uberon=UBERON:0004872!1.95e-11!84;UBERON:0000055!3.18e-11!69;UBERON:0001981!1.11e-10!60;UBERON:0007500!1.11e-10!60;UBERON:0004537!1.11e-10!60;UBERON:0006965!1.11e-10!60;UBERON:0002049!2.07e-10!79;UBERON:0007798!2.07e-10!79;UBERON:0003914!3.12e-10!118;UBERON:0001637!9.65e-10!42;UBERON:0003509!9.65e-10!42;UBERON:0004572!9.65e-10!42;UBERON:0000490!1.41e-08!138;UBERON:0004573!9.83e-08!33;UBERON:0004571!9.83e-08!33;UBERON:0002100!1.75e-07!216;UBERON:0004535!2.80e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.93e-08;42!UBERON:0003509;7.93e-08;42!UBERON:0004572;7.93e-08;42!UBERON:0004573;1.28e-07;33!UBERON:0004571;1.28e-07;33!UBERON:0007500;3.19e-07;56!UBERON:0001981;3.19e-07;56!UBERON:0004537;3.19e-07;56 | |||
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| ||
|short_description=p4@SHMT2 | |short_description=p4@SHMT2 | ||
}} | }} |
Revision as of 14:28, 13 August 2012
Short description: | p4@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SHMT2_5end |
Coexpression cluster: | C2221_Mesenchymal_Fibroblast_Keratocytes_Keratinocyte_Osteoblast_mesenchymal_Hepatocyte |
Association with transcript: | 9bp_to_ENST00000557302_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.