FFCP PHASE1:Mm9::chrX:7182500..7182528,-: Difference between revisions
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|id=chrX:7182500..7182528,- | |id=chrX:7182500..7182528,- | ||
|ontology_enrichment_celltype=CL:0000723!4.26e-10!91;CL:0000048!4.26e-10!91;CL:0000034!4.99e-09!97;CL:0000049!8.86e-09!19;CL:0002319!8.17e-08!43;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0000540!9.68e-08!33;CL:0000047!9.68e-08!33;CL:0000031!9.68e-08!33;CL:0000404!9.68e-08!33;CL:0000221!1.11e-07!44;CL:0000133!1.11e-07!44;CL:0000117!1.81e-07!23;CL:0000337!1.81e-07!23;CL:0000763!4.66e-07!16 | |ontology_enrichment_celltype=CL:0000723!4.26e-10!91;CL:0000048!4.26e-10!91;CL:0000034!4.99e-09!97;CL:0000049!8.86e-09!19;CL:0002319!8.17e-08!43;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0000540!9.68e-08!33;CL:0000047!9.68e-08!33;CL:0000031!9.68e-08!33;CL:0000404!9.68e-08!33;CL:0000221!1.11e-07!44;CL:0000133!1.11e-07!44;CL:0000117!1.81e-07!23;CL:0000337!1.81e-07!23;CL:0000763!4.66e-07!16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.26e-10,91;CL:0000048,4.26e-10,91;CL:0000034,4.99e-09,97;CL:0000049,8.86e-09,19;CL:0002319,8.17e-08,43;CL:0000988,8.65e-08,32;CL:0002032,8.65e-08,32;CL:0000037,8.65e-08,32;CL:0000837,8.65e-08,32;CL:0000540,9.68e-08,33;CL:0000047,9.68e-08,33;CL:0000031,9.68e-08,33;CL:0000404,9.68e-08,33;CL:0000221,1.11e-07,44;CL:0000133,1.11e-07,44;CL:0000117,1.81e-07,23;CL:0000337,1.81e-07,23;CL:0000763,4.66e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.23e-14!75;UBERON:0001016!1.23e-14!75;UBERON:0001017!4.76e-14!73;UBERON:0005743!4.76e-14!73;UBERON:0002020!3.94e-12!34;UBERON:0002791!1.96e-11!29;UBERON:0003528!1.96e-11!29;UBERON:0001893!1.96e-11!29;UBERON:0001049!7.40e-11!52;UBERON:0005068!7.40e-11!52;UBERON:0006241!7.40e-11!52;UBERON:0007135!7.40e-11!52;UBERON:0004121!7.57e-11!102;UBERON:0000924!7.57e-11!102;UBERON:0006601!7.57e-11!102;UBERON:0000955!1.19e-10!50;UBERON:0006238!1.19e-10!50;UBERON:0002616!3.68e-10!49;UBERON:0000033!6.05e-10!63;UBERON:0000956!8.51e-09!21;UBERON:0001869!8.51e-09!21;UBERON:0000203!8.51e-09!21;UBERON:0002346!1.05e-08!71;UBERON:0003075!1.05e-08!71;UBERON:0007284!1.05e-08!71;UBERON:0003080!3.09e-08!40;UBERON:0003056!5.12e-08!49;UBERON:0007811!7.51e-08!86;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0002371!3.06e-07!16;UBERON:0002619!7.99e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!1.23e-14!75;UBERON:0001016!1.23e-14!75;UBERON:0001017!4.76e-14!73;UBERON:0005743!4.76e-14!73;UBERON:0002020!3.94e-12!34;UBERON:0002791!1.96e-11!29;UBERON:0003528!1.96e-11!29;UBERON:0001893!1.96e-11!29;UBERON:0001049!7.40e-11!52;UBERON:0005068!7.40e-11!52;UBERON:0006241!7.40e-11!52;UBERON:0007135!7.40e-11!52;UBERON:0004121!7.57e-11!102;UBERON:0000924!7.57e-11!102;UBERON:0006601!7.57e-11!102;UBERON:0000955!1.19e-10!50;UBERON:0006238!1.19e-10!50;UBERON:0002616!3.68e-10!49;UBERON:0000033!6.05e-10!63;UBERON:0000956!8.51e-09!21;UBERON:0001869!8.51e-09!21;UBERON:0000203!8.51e-09!21;UBERON:0002346!1.05e-08!71;UBERON:0003075!1.05e-08!71;UBERON:0007284!1.05e-08!71;UBERON:0003080!3.09e-08!40;UBERON:0003056!5.12e-08!49;UBERON:0007811!7.51e-08!86;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0002371!3.06e-07!16;UBERON:0002619!7.99e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-14,75;UBERON:0001017,4.76e-14,73;UBERON:0004121,9.75e-13,95;UBERON:0000924,9.75e-13,95;UBERON:0006601,9.75e-13,95;UBERON:0002020,3.94e-12,34;UBERON:0003528,1.96e-11,29;UBERON:0002791,1.96e-11,29;UBERON:0001893,1.96e-11,29;UBERON:0000073,4.63e-11,54;UBERON:0001049,7.40e-11,52;UBERON:0005068,7.40e-11,52;UBERON:0006241,7.40e-11,52;UBERON:0007135,7.40e-11,52;UBERON:0002346,7.93e-11,64;UBERON:0003075,7.93e-11,64;UBERON:0007284,7.93e-11,64;UBERON:0000955,3.10e-10,47;UBERON:0006238,3.10e-10,47;UBERON:0002616,9.54e-10,46;UBERON:0000956,8.51e-09,21;UBERON:0001869,8.51e-09,21;UBERON:0000203,8.51e-09,21;UBERON:0010371,2.15e-08,73;UBERON:0003080,3.09e-08,40;UBERON:0003056,5.12e-08,49;UBERON:0002780,8.27e-08,39;UBERON:0001890,8.27e-08,39;UBERON:0006240,8.27e-08,39;UBERON:0002371,3.06e-07,16;UBERON:0011216,5.93e-07,194;UBERON:0002619,7.99e-07,17 | |||
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| ||
|short_description=p1@Ppp1r3f | |short_description=p1@Ppp1r3f | ||
}} | }} |
Revision as of 22:46, 14 November 2012
Short description: | p1@Ppp1r3f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp1r3f_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000126170_5end |
EntrezGene: | Ppp1r3f |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.26e-10 | 91 |
multi fate stem cell | 4.26e-10 | 91 |
stem cell | 4.99e-09 | 97 |
common myeloid progenitor | 8.86e-09 | 19 |
neural cell | 8.17e-08 | 43 |
hematopoietic cell | 8.65e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.65e-08 | 32 |
hematopoietic stem cell | 8.65e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.65e-08 | 32 |
neuron | 9.68e-08 | 33 |
neuronal stem cell | 9.68e-08 | 33 |
neuroblast | 9.68e-08 | 33 |
electrically signaling cell | 9.68e-08 | 33 |
ectodermal cell | 1.11e-07 | 44 |
neurectodermal cell | 1.11e-07 | 44 |
CNS neuron (sensu Vertebrata) | 1.81e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.81e-07 | 23 |
myeloid cell | 4.66e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.23e-14 | 75 |
central nervous system | 4.76e-14 | 73 |
ectoderm-derived structure | 9.75e-13 | 95 |
ectoderm | 9.75e-13 | 95 |
presumptive ectoderm | 9.75e-13 | 95 |
gray matter | 3.94e-12 | 34 |
brain grey matter | 1.96e-11 | 29 |
regional part of telencephalon | 1.96e-11 | 29 |
telencephalon | 1.96e-11 | 29 |
regional part of nervous system | 4.63e-11 | 54 |
neural tube | 7.40e-11 | 52 |
neural rod | 7.40e-11 | 52 |
future spinal cord | 7.40e-11 | 52 |
neural keel | 7.40e-11 | 52 |
neurectoderm | 7.93e-11 | 64 |
neural plate | 7.93e-11 | 64 |
presumptive neural plate | 7.93e-11 | 64 |
brain | 3.10e-10 | 47 |
future brain | 3.10e-10 | 47 |
regional part of brain | 9.54e-10 | 46 |
cerebral cortex | 8.51e-09 | 21 |
cerebral hemisphere | 8.51e-09 | 21 |
pallium | 8.51e-09 | 21 |
ecto-epithelium | 2.15e-08 | 73 |
anterior neural tube | 3.09e-08 | 40 |
pre-chordal neural plate | 5.12e-08 | 49 |
regional part of forebrain | 8.27e-08 | 39 |
forebrain | 8.27e-08 | 39 |
future forebrain | 8.27e-08 | 39 |
bone marrow | 3.06e-07 | 16 |
organ system subdivision | 5.93e-07 | 194 |
regional part of cerebral cortex | 7.99e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.