FFCP PHASE1:Mm9::chr8:23587281..23587345,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr8:23587281..23587345,- | |id=chr8:23587281..23587345,- | ||
|ontology_enrichment_celltype=CL:0000055!8.87e-18!50;CL:0000221!8.94e-17!44;CL:0000133!8.94e-17!44;CL:0002319!1.48e-16!43;CL:0000393!6.91e-14!39;CL:0000211!6.91e-14!39;CL:0000540!4.14e-12!33;CL:0000047!4.14e-12!33;CL:0000031!4.14e-12!33;CL:0000404!4.14e-12!33;CL:0000117!6.44e-11!23;CL:0000337!6.44e-11!23;CL:0002321!1.37e-07!70;CL:0000220!1.37e-07!70;CL:0000723!9.09e-07!91;CL:0000048!9.09e-07!91 | |ontology_enrichment_celltype=CL:0000055!8.87e-18!50;CL:0000221!8.94e-17!44;CL:0000133!8.94e-17!44;CL:0002319!1.48e-16!43;CL:0000393!6.91e-14!39;CL:0000211!6.91e-14!39;CL:0000540!4.14e-12!33;CL:0000047!4.14e-12!33;CL:0000031!4.14e-12!33;CL:0000404!4.14e-12!33;CL:0000117!6.44e-11!23;CL:0000337!6.44e-11!23;CL:0002321!1.37e-07!70;CL:0000220!1.37e-07!70;CL:0000723!9.09e-07!91;CL:0000048!9.09e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.94e-17,44;CL:0000133,8.94e-17,44;CL:0002319,1.48e-16,43;CL:0000393,6.91e-14,39;CL:0000211,6.91e-14,39;CL:0000540,4.14e-12,33;CL:0000047,4.14e-12,33;CL:0000031,4.14e-12,33;CL:0000404,4.14e-12,33;CL:0000117,6.44e-11,23;CL:0000337,6.44e-11,23;CL:0002321,1.37e-07,70;CL:0000723,9.09e-07,91;CL:0000048,9.09e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.32e-18!75;UBERON:0001016!7.32e-18!75;UBERON:0001017!1.31e-17!73;UBERON:0005743!1.31e-17!73;UBERON:0004121!1.45e-14!102;UBERON:0000924!1.45e-14!102;UBERON:0006601!1.45e-14!102;UBERON:0001049!4.87e-11!52;UBERON:0005068!4.87e-11!52;UBERON:0006241!4.87e-11!52;UBERON:0007135!4.87e-11!52;UBERON:0002616!3.34e-10!49;UBERON:0000033!3.35e-10!63;UBERON:0000955!9.45e-10!50;UBERON:0006238!9.45e-10!50;UBERON:0002346!2.04e-09!71;UBERON:0003075!2.04e-09!71;UBERON:0007284!2.04e-09!71;UBERON:0004111!8.58e-09!122;UBERON:0000025!8.41e-08!114;UBERON:0003080!2.99e-07!40;UBERON:0002020!6.28e-07!34;UBERON:0002780!8.59e-07!39;UBERON:0001890!8.59e-07!39;UBERON:0006240!8.59e-07!39 | |ontology_enrichment_uberon=UBERON:0000073!7.32e-18!75;UBERON:0001016!7.32e-18!75;UBERON:0001017!1.31e-17!73;UBERON:0005743!1.31e-17!73;UBERON:0004121!1.45e-14!102;UBERON:0000924!1.45e-14!102;UBERON:0006601!1.45e-14!102;UBERON:0001049!4.87e-11!52;UBERON:0005068!4.87e-11!52;UBERON:0006241!4.87e-11!52;UBERON:0007135!4.87e-11!52;UBERON:0002616!3.34e-10!49;UBERON:0000033!3.35e-10!63;UBERON:0000955!9.45e-10!50;UBERON:0006238!9.45e-10!50;UBERON:0002346!2.04e-09!71;UBERON:0003075!2.04e-09!71;UBERON:0007284!2.04e-09!71;UBERON:0004111!8.58e-09!122;UBERON:0000025!8.41e-08!114;UBERON:0003080!2.99e-07!40;UBERON:0002020!6.28e-07!34;UBERON:0002780!8.59e-07!39;UBERON:0001890!8.59e-07!39;UBERON:0006240!8.59e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.32e-18,75;UBERON:0001017,1.31e-17,73;UBERON:0004121,7.99e-16,95;UBERON:0000924,7.99e-16,95;UBERON:0006601,7.99e-16,95;UBERON:0010314,5.15e-15,92;UBERON:0000073,3.43e-12,54;UBERON:0001049,4.87e-11,52;UBERON:0005068,4.87e-11,52;UBERON:0006241,4.87e-11,52;UBERON:0007135,4.87e-11,52;UBERON:0002346,1.13e-10,64;UBERON:0003075,1.13e-10,64;UBERON:0007284,1.13e-10,64;UBERON:0010371,2.15e-09,73;UBERON:0002616,7.86e-09,46;UBERON:0004111,8.58e-09,122;UBERON:0000955,2.07e-08,47;UBERON:0006238,2.07e-08,47;UBERON:0000025,8.41e-08,114;UBERON:0003080,2.99e-07,40;UBERON:0002020,6.28e-07,34;UBERON:0002780,8.59e-07,39;UBERON:0001890,8.59e-07,39;UBERON:0006240,8.59e-07,39 | |||
|phase1_expression=13.1322054625931,2.79180326111489,6.82498859084304,2.11724947914781,2.50447864973174,6.04365378882803,7.94282978024787,20.0141151334443,1.54867594366833,1.17032263160997,3.5955773327356,6.06268408364557,16.4352700733957,20.1066925563694,4.33042690360362,3.23960427823721,4.19737126876888,11.987562283613,13.1629856261509,9.76096199135469,13.0966666832647,10.5248408272938,10.4479915655574,6.55968933452967,8.94696196161963,2.29692785646008,9.90752591165872,6.89507944594845,9.5011709728187,11.3413558391969,7.31710685162506,11.4305521222734,6.76571266343027,0,4.91047753577167,6.31691652362271,6.73758875665818,33.0639988282157,26.5654017138092,21.4644735029257,25.8821854733646,21.1744100337118,29.6161315349004,15.8629990649227,14.4969011643906,11.3798986340243,54.7673941043627,15.2617609466313,27.2410866590745,16.5265414213141,15.2585199571645,17.2503077237966,8.89247812106003,8.70434570413613,8.06625117941913,12.6057123657614,16.3324060765091,26.2992767061496,26.5034563726073,17.9856932952491,18.3811107016792,19.9918273920788,29.3467282716676,38.2457379844595,35.5991890524111,22.7353636782752,34.1544125990981,42.264013585371,14.9313041724208,14.5806413398226,16.8259969081106,18.5673139862472,15.9025349485162,13.5964787128599,11.6931474642248,14.7075005857603,17.6185409599022,18.8977260366078,19.6616362567992,19.3872842963385,19.1209175129036,14.0646610050325,25.9640189071284,20.2594539611405,23.6837284054056,15.6153150301044,14.9490264839058,16.7759501242771,11.8890123533099,12.5448789777264,10.4351215932604,8.60423876981386,1.3599426674155,7.55584468292944,9.74664626171504,8.96053774194671,14.8871085339657,12.7822741933543,13.5088722393492,18.3736578745377,13.5209682985613,12.8326477414318,2.54805239706646,14.2213340630666,6.061749148314,8.61423542615335,8.08839112023653,10.9616524530298,7.76813650941515,11.7269289861212,8.15381035800839,7.91610243611567,10.1470818792666,8.89263579260473,10.1126288136706,11.4356598110005,9.14621380617183,8.82056077211461,10.6153266233985,12.4560474459505,12.5879665522424,6.30337829075789,5.59175283654366,10.8328894894272,11.1006754611131,6.38642638021478,9.58520996047362,5.99902730993408,7.87835407853001,21.4200614348896,10.980014467647,13.5706700281894,15.9918374576894,10.9957646652042,15.9996794310861,12.6548185192851,13.4427960282417,10.8234064430781,13.3943061969848,7.36546495602659,10.539755879979,13.5642241615749,10.0834792690996,10.8507468841715,12.3146063463903,12.2989171473456,12.9308379892426,7.76110112217047,10.5628316537093,8.13156144721623,11.6127741948206,12.9325482132269,8.34141747676794,12.8853301613202,10.0833246839892,8.7575077400137,7.02213187313235,8.74982884190032,10.7982129770325,9.11353399156208,12.195355119017,10.9837857491219,10.6535131013345,11.4123254413494,13.884040159864,16.509910077279,15.5598572811779,15.2962598500992,19.2535024398772,15.595909087514,17.5919316714507,17.8363984658905,15.1489579550825,15.4337381574428,10.7247873767705,10.2904612379284,4.62586296177317,7.66906643324278,7.46508876873319,7.43157349953403,6.95884291139304,8.87407508342707,5.55945109612176,7.79925067061493,5.69434873853414,6.25856027951241,8.29406189040889,8.55512829776949,10.3330966173134,3.59527763461689,4.53889904736858,3.38540164532424,10.4317345524195,6.28366819353509,9.01661885384643,10.386217720111,7.5641469995374,10.8710520829994,11.3825766823663,6.7900668070617,8.63493003127561,8.51440431060424,4.15033677922008,4.83850806576673,3.14494392181125,2.9232074610031,5.07150303471257,4.58236603529592,6.87489799809833,4.60313819921297,12.4844124616777,4.66754402419738,27.3159592401974,10.4199465347181,4.68056509671841,6.81962970457202,6.09951205974501,5.30687873499704,12.3784637411625,8.33762211790133,7.49638891633319,7.97801903143384,10.0916806764056,10.5528942188344,9.28370199455454,13.8544889979037,11.0344600874334,11.7376285513851,15.9454768657487,10.651115456523,12.4333186943445,13.1630643309176,9.04747703635634,10.8781136763742,6.39293554924747,11.8652800911035,18.9449696185595,15.3547309435786,16.0656246469142,17.1680230498974,15.1443945319803,14.4462335389756,10.1248996934415,14.8160654730582,12.6995244226965,15.5692091933858,16.1924280669958,9.05993159525067,14.6256477840214,8.35435422696698,13.9101283504103,14.2452482933804,15.1484872198826,14.6823409445557,10.619611067197,8.74010290157933,8.16273603804828,10.3732793865744,11.8120757152309,11.3751004739253,9.30341855405596,11.9966130727577,12.1209108650805,8.84902922220285,7.37930260024991,11.3449097573006,12.5962654128902,9.90336017172206,15.6524007377133,13.2888961719587,14.3645589250242,10.3453914209201,17.2776471632227,13.3964577610424,5.16277757740163,10.591603543191,10.5853631066382,10.2229476823718,8.88054346827481,9.40881628879231,10.1466492402666,7.55048138827282,5.24665505933731,14.6485988588303,9.22702756308404,13.4151464176095,8.33375373163703,6.2161590811548,4.92099219795691,6.86334519619568,11.3885548095883,13.1554365184239,11.746997773376,5.72802370809068,8.06656783631895,9.14937602070819,7.99239522081329,7.94535524854981,7.20596460362386,9.03591120778299,11.075563067195,10.2084817373772,4.92536898508813,17.3975007664339,10.1464728963154,8.22341003241883,9.26567546559747,11.0837177356107,11.6243841129958,12.8406655372991,10.9142231940551,16.2755481054938,13.1074180532139,8.69702834973622,8.06484017522023,9.48033361884535,11.3526120562492,9.14127518766963,10.5235866612014,8.59328139203911,10.530111803407,9.97622231015741,10.7813354837441,7.87538309595551,9.67826444518498,9.07435666231565,9.25849867027648,8.178006539428,9.46702907670709,15.4176660858344,4.66170502085536,3.22969883794113,3.52557694364565,11.3981860478992,9.57180624801028,9.70703608616505,7.93163002592544,13.0408747049194,10.7302850097243,9.20650473014354,8.59343270159095,7.73339320546594,11.6464028361009,15.107877947794,9.45031500324528,10.8077088773813,9.5159905886683,15.0150490408028,5.91587881229807,9.97562183502578,10.2440163452481,6.32077464377565,8.59413966774727,10.6629234901008,8.22312892865976,8.44743734679466,7.70206103020357,10.6132828940795,7.60437899670719,8.86543804514558,9.45779225445812,9.02754648908657,9.99377159827671,8.57328644309533,10.1978206831473,9.25964258225784,7.82963211526283,6.77115032618228,7.20025430009372,10.4710725634009,7.39152188836695,9.01147783120437,8.65806299821042,8.630690004951,9.51225458938417,6.57674278594607,8.41985505844343,11.7839877048125,9.84670650430645,7.68334962529395,7.36615877705441,10.3807683594597,10.2240503820005,12.2407183189594,12.1644436391612,11.1732948105115,14.3466249051633,13.67666798541,13.216466630364 | |phase1_expression=13.1322054625931,2.79180326111489,6.82498859084304,2.11724947914781,2.50447864973174,6.04365378882803,7.94282978024787,20.0141151334443,1.54867594366833,1.17032263160997,3.5955773327356,6.06268408364557,16.4352700733957,20.1066925563694,4.33042690360362,3.23960427823721,4.19737126876888,11.987562283613,13.1629856261509,9.76096199135469,13.0966666832647,10.5248408272938,10.4479915655574,6.55968933452967,8.94696196161963,2.29692785646008,9.90752591165872,6.89507944594845,9.5011709728187,11.3413558391969,7.31710685162506,11.4305521222734,6.76571266343027,0,4.91047753577167,6.31691652362271,6.73758875665818,33.0639988282157,26.5654017138092,21.4644735029257,25.8821854733646,21.1744100337118,29.6161315349004,15.8629990649227,14.4969011643906,11.3798986340243,54.7673941043627,15.2617609466313,27.2410866590745,16.5265414213141,15.2585199571645,17.2503077237966,8.89247812106003,8.70434570413613,8.06625117941913,12.6057123657614,16.3324060765091,26.2992767061496,26.5034563726073,17.9856932952491,18.3811107016792,19.9918273920788,29.3467282716676,38.2457379844595,35.5991890524111,22.7353636782752,34.1544125990981,42.264013585371,14.9313041724208,14.5806413398226,16.8259969081106,18.5673139862472,15.9025349485162,13.5964787128599,11.6931474642248,14.7075005857603,17.6185409599022,18.8977260366078,19.6616362567992,19.3872842963385,19.1209175129036,14.0646610050325,25.9640189071284,20.2594539611405,23.6837284054056,15.6153150301044,14.9490264839058,16.7759501242771,11.8890123533099,12.5448789777264,10.4351215932604,8.60423876981386,1.3599426674155,7.55584468292944,9.74664626171504,8.96053774194671,14.8871085339657,12.7822741933543,13.5088722393492,18.3736578745377,13.5209682985613,12.8326477414318,2.54805239706646,14.2213340630666,6.061749148314,8.61423542615335,8.08839112023653,10.9616524530298,7.76813650941515,11.7269289861212,8.15381035800839,7.91610243611567,10.1470818792666,8.89263579260473,10.1126288136706,11.4356598110005,9.14621380617183,8.82056077211461,10.6153266233985,12.4560474459505,12.5879665522424,6.30337829075789,5.59175283654366,10.8328894894272,11.1006754611131,6.38642638021478,9.58520996047362,5.99902730993408,7.87835407853001,21.4200614348896,10.980014467647,13.5706700281894,15.9918374576894,10.9957646652042,15.9996794310861,12.6548185192851,13.4427960282417,10.8234064430781,13.3943061969848,7.36546495602659,10.539755879979,13.5642241615749,10.0834792690996,10.8507468841715,12.3146063463903,12.2989171473456,12.9308379892426,7.76110112217047,10.5628316537093,8.13156144721623,11.6127741948206,12.9325482132269,8.34141747676794,12.8853301613202,10.0833246839892,8.7575077400137,7.02213187313235,8.74982884190032,10.7982129770325,9.11353399156208,12.195355119017,10.9837857491219,10.6535131013345,11.4123254413494,13.884040159864,16.509910077279,15.5598572811779,15.2962598500992,19.2535024398772,15.595909087514,17.5919316714507,17.8363984658905,15.1489579550825,15.4337381574428,10.7247873767705,10.2904612379284,4.62586296177317,7.66906643324278,7.46508876873319,7.43157349953403,6.95884291139304,8.87407508342707,5.55945109612176,7.79925067061493,5.69434873853414,6.25856027951241,8.29406189040889,8.55512829776949,10.3330966173134,3.59527763461689,4.53889904736858,3.38540164532424,10.4317345524195,6.28366819353509,9.01661885384643,10.386217720111,7.5641469995374,10.8710520829994,11.3825766823663,6.7900668070617,8.63493003127561,8.51440431060424,4.15033677922008,4.83850806576673,3.14494392181125,2.9232074610031,5.07150303471257,4.58236603529592,6.87489799809833,4.60313819921297,12.4844124616777,4.66754402419738,27.3159592401974,10.4199465347181,4.68056509671841,6.81962970457202,6.09951205974501,5.30687873499704,12.3784637411625,8.33762211790133,7.49638891633319,7.97801903143384,10.0916806764056,10.5528942188344,9.28370199455454,13.8544889979037,11.0344600874334,11.7376285513851,15.9454768657487,10.651115456523,12.4333186943445,13.1630643309176,9.04747703635634,10.8781136763742,6.39293554924747,11.8652800911035,18.9449696185595,15.3547309435786,16.0656246469142,17.1680230498974,15.1443945319803,14.4462335389756,10.1248996934415,14.8160654730582,12.6995244226965,15.5692091933858,16.1924280669958,9.05993159525067,14.6256477840214,8.35435422696698,13.9101283504103,14.2452482933804,15.1484872198826,14.6823409445557,10.619611067197,8.74010290157933,8.16273603804828,10.3732793865744,11.8120757152309,11.3751004739253,9.30341855405596,11.9966130727577,12.1209108650805,8.84902922220285,7.37930260024991,11.3449097573006,12.5962654128902,9.90336017172206,15.6524007377133,13.2888961719587,14.3645589250242,10.3453914209201,17.2776471632227,13.3964577610424,5.16277757740163,10.591603543191,10.5853631066382,10.2229476823718,8.88054346827481,9.40881628879231,10.1466492402666,7.55048138827282,5.24665505933731,14.6485988588303,9.22702756308404,13.4151464176095,8.33375373163703,6.2161590811548,4.92099219795691,6.86334519619568,11.3885548095883,13.1554365184239,11.746997773376,5.72802370809068,8.06656783631895,9.14937602070819,7.99239522081329,7.94535524854981,7.20596460362386,9.03591120778299,11.075563067195,10.2084817373772,4.92536898508813,17.3975007664339,10.1464728963154,8.22341003241883,9.26567546559747,11.0837177356107,11.6243841129958,12.8406655372991,10.9142231940551,16.2755481054938,13.1074180532139,8.69702834973622,8.06484017522023,9.48033361884535,11.3526120562492,9.14127518766963,10.5235866612014,8.59328139203911,10.530111803407,9.97622231015741,10.7813354837441,7.87538309595551,9.67826444518498,9.07435666231565,9.25849867027648,8.178006539428,9.46702907670709,15.4176660858344,4.66170502085536,3.22969883794113,3.52557694364565,11.3981860478992,9.57180624801028,9.70703608616505,7.93163002592544,13.0408747049194,10.7302850097243,9.20650473014354,8.59343270159095,7.73339320546594,11.6464028361009,15.107877947794,9.45031500324528,10.8077088773813,9.5159905886683,15.0150490408028,5.91587881229807,9.97562183502578,10.2440163452481,6.32077464377565,8.59413966774727,10.6629234901008,8.22312892865976,8.44743734679466,7.70206103020357,10.6132828940795,7.60437899670719,8.86543804514558,9.45779225445812,9.02754648908657,9.99377159827671,8.57328644309533,10.1978206831473,9.25964258225784,7.82963211526283,6.77115032618228,7.20025430009372,10.4710725634009,7.39152188836695,9.01147783120437,8.65806299821042,8.630690004951,9.51225458938417,6.57674278594607,8.41985505844343,11.7839877048125,9.84670650430645,7.68334962529395,7.36615877705441,10.3807683594597,10.2240503820005,12.2407183189594,12.1644436391612,11.1732948105115,14.3466249051633,13.67666798541,13.216466630364 | ||
|short_description=p1@AI316807 | |short_description=p1@AI316807 | ||
}} | }} |
Revision as of 18:08, 13 November 2012
Short description: | p1@AI316807 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AI316807_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENSMUST00000033935, ENSMUST00000163774, NM_001012667, NM_001146117, uc009ldd.2, uc009lde.2_5end |
EntrezGene: | AI316807 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.94e-17 | 44 |
neurectodermal cell | 8.94e-17 | 44 |
neural cell | 1.48e-16 | 43 |
electrically responsive cell | 6.91e-14 | 39 |
electrically active cell | 6.91e-14 | 39 |
neuron | 4.14e-12 | 33 |
neuronal stem cell | 4.14e-12 | 33 |
neuroblast | 4.14e-12 | 33 |
electrically signaling cell | 4.14e-12 | 33 |
CNS neuron (sensu Vertebrata) | 6.44e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.44e-11 | 23 |
embryonic cell | 1.37e-07 | 70 |
somatic stem cell | 9.09e-07 | 91 |
multi fate stem cell | 9.09e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.32e-18 | 75 |
central nervous system | 1.31e-17 | 73 |
ectoderm-derived structure | 7.99e-16 | 95 |
ectoderm | 7.99e-16 | 95 |
presumptive ectoderm | 7.99e-16 | 95 |
structure with developmental contribution from neural crest | 5.15e-15 | 92 |
regional part of nervous system | 3.43e-12 | 54 |
neural tube | 4.87e-11 | 52 |
neural rod | 4.87e-11 | 52 |
future spinal cord | 4.87e-11 | 52 |
neural keel | 4.87e-11 | 52 |
neurectoderm | 1.13e-10 | 64 |
neural plate | 1.13e-10 | 64 |
presumptive neural plate | 1.13e-10 | 64 |
ecto-epithelium | 2.15e-09 | 73 |
regional part of brain | 7.86e-09 | 46 |
anatomical conduit | 8.58e-09 | 122 |
brain | 2.07e-08 | 47 |
future brain | 2.07e-08 | 47 |
tube | 8.41e-08 | 114 |
anterior neural tube | 2.99e-07 | 40 |
gray matter | 6.28e-07 | 34 |
regional part of forebrain | 8.59e-07 | 39 |
forebrain | 8.59e-07 | 39 |
future forebrain | 8.59e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.