Personal tools

FFCP PHASE1:Mm9::chr5:112657789..112657830,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr5:112657789..112657830,-
|id=chr5:112657789..112657830,-
|ontology_enrichment_celltype=CL:0000540!2.20e-20!33;CL:0000047!2.20e-20!33;CL:0000031!2.20e-20!33;CL:0000404!2.20e-20!33;CL:0000393!3.51e-15!39;CL:0000211!3.51e-15!39;CL:0000117!2.92e-13!23;CL:0000337!2.92e-13!23;CL:0000221!4.43e-13!44;CL:0000133!4.43e-13!44;CL:0002319!1.38e-12!43;CL:0000055!3.66e-09!50;CL:0000107!9.84e-08!9
|ontology_enrichment_celltype=CL:0000540!2.20e-20!33;CL:0000047!2.20e-20!33;CL:0000031!2.20e-20!33;CL:0000404!2.20e-20!33;CL:0000393!3.51e-15!39;CL:0000211!3.51e-15!39;CL:0000117!2.92e-13!23;CL:0000337!2.92e-13!23;CL:0000221!4.43e-13!44;CL:0000133!4.43e-13!44;CL:0002319!1.38e-12!43;CL:0000055!3.66e-09!50;CL:0000107!9.84e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.64e-24,33;CL:0000047,1.64e-24,33;CL:0000031,1.64e-24,33;CL:0000404,1.64e-24,33;CL:0000393,1.53e-19,39;CL:0000211,1.53e-19,39;CL:0000221,8.12e-18,44;CL:0000133,8.12e-18,44;CL:0002319,5.17e-17,43;CL:0000117,1.18e-14,23;CL:0000337,1.18e-14,23;CL:0000107,3.28e-10,9;CL:0002321,1.94e-08,70;CL:0002609,3.17e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.10e-32!102;UBERON:0000924!1.10e-32!102;UBERON:0006601!1.10e-32!102;UBERON:0001017!8.62e-32!73;UBERON:0005743!8.62e-32!73;UBERON:0000073!2.99e-30!75;UBERON:0001016!2.99e-30!75;UBERON:0002346!7.74e-29!71;UBERON:0003075!7.74e-29!71;UBERON:0007284!7.74e-29!71;UBERON:0003056!3.80e-26!49;UBERON:0000033!7.19e-26!63;UBERON:0001049!2.54e-23!52;UBERON:0005068!2.54e-23!52;UBERON:0006241!2.54e-23!52;UBERON:0007135!2.54e-23!52;UBERON:0003080!1.34e-22!40;UBERON:0000955!1.95e-22!50;UBERON:0006238!1.95e-22!50;UBERON:0002616!6.22e-22!49;UBERON:0002780!9.74e-22!39;UBERON:0001890!9.74e-22!39;UBERON:0006240!9.74e-22!39;UBERON:0002020!4.54e-19!34;UBERON:0002791!4.88e-17!29;UBERON:0003528!4.88e-17!29;UBERON:0001893!4.88e-17!29;UBERON:0000153!4.27e-14!94;UBERON:0007811!2.05e-13!86;UBERON:0000956!3.18e-12!21;UBERON:0001869!3.18e-12!21;UBERON:0000203!3.18e-12!21;UBERON:0002619!1.08e-09!17;UBERON:0002021!3.20e-08!10;UBERON:0000411!3.20e-08!10;UBERON:0001950!3.20e-08!10;UBERON:0002410!9.84e-08!9
|ontology_enrichment_uberon=UBERON:0004121!1.10e-32!102;UBERON:0000924!1.10e-32!102;UBERON:0006601!1.10e-32!102;UBERON:0001017!8.62e-32!73;UBERON:0005743!8.62e-32!73;UBERON:0000073!2.99e-30!75;UBERON:0001016!2.99e-30!75;UBERON:0002346!7.74e-29!71;UBERON:0003075!7.74e-29!71;UBERON:0007284!7.74e-29!71;UBERON:0003056!3.80e-26!49;UBERON:0000033!7.19e-26!63;UBERON:0001049!2.54e-23!52;UBERON:0005068!2.54e-23!52;UBERON:0006241!2.54e-23!52;UBERON:0007135!2.54e-23!52;UBERON:0003080!1.34e-22!40;UBERON:0000955!1.95e-22!50;UBERON:0006238!1.95e-22!50;UBERON:0002616!6.22e-22!49;UBERON:0002780!9.74e-22!39;UBERON:0001890!9.74e-22!39;UBERON:0006240!9.74e-22!39;UBERON:0002020!4.54e-19!34;UBERON:0002791!4.88e-17!29;UBERON:0003528!4.88e-17!29;UBERON:0001893!4.88e-17!29;UBERON:0000153!4.27e-14!94;UBERON:0007811!2.05e-13!86;UBERON:0000956!3.18e-12!21;UBERON:0001869!3.18e-12!21;UBERON:0000203!3.18e-12!21;UBERON:0002619!1.08e-09!17;UBERON:0002021!3.20e-08!10;UBERON:0000411!3.20e-08!10;UBERON:0001950!3.20e-08!10;UBERON:0002410!9.84e-08!9
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.20e-37,73;UBERON:0004121,5.60e-37,95;UBERON:0000924,5.60e-37,95;UBERON:0006601,5.60e-37,95;UBERON:0001016,7.10e-36,75;UBERON:0002346,2.63e-35,64;UBERON:0003075,2.63e-35,64;UBERON:0007284,2.63e-35,64;UBERON:0010371,1.60e-32,73;UBERON:0003056,1.36e-31,49;UBERON:0000073,2.08e-26,54;UBERON:0003080,2.35e-26,40;UBERON:0001049,2.91e-26,52;UBERON:0005068,2.91e-26,52;UBERON:0006241,2.91e-26,52;UBERON:0007135,2.91e-26,52;UBERON:0002616,2.06e-25,46;UBERON:0002780,5.18e-25,39;UBERON:0001890,5.18e-25,39;UBERON:0006240,5.18e-25,39;UBERON:0000955,1.14e-24,47;UBERON:0006238,1.14e-24,47;UBERON:0010314,3.47e-23,92;UBERON:0003528,2.79e-22,29;UBERON:0002791,2.79e-22,29;UBERON:0001893,2.79e-22,29;UBERON:0002020,1.13e-21,34;UBERON:0000956,2.96e-17,21;UBERON:0001869,2.96e-17,21;UBERON:0000203,2.96e-17,21;UBERON:0002619,5.25e-13,17;UBERON:0002410,3.28e-10,9;UBERON:0002021,3.08e-09,10;UBERON:0000411,3.08e-09,10;UBERON:0001950,3.08e-09,10;UBERON:0000010,4.92e-08,11;UBERON:0004111,6.38e-07,122;UBERON:0000025,7.70e-07,114;UBERON:0000020,8.84e-07,12;UBERON:0001032,8.84e-07,12;UBERON:0004456,8.84e-07,12
|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,1.75507719831198,1.47227472945967,0.571301968807607,0.220868540951614,1.22490799214954,2.01275489138296,2.75765635983006,1.10115880999389,0.638436690425939,1.0752457327937,1.31886287730194,2.47016637726506,1.56274011167028,0.279182999001381,2.25105044012672,1.22238598221448,2.35702868378934,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39665023047716,0.915001205637253,4.90051973240171,1.56441888173049,2.30143911597297,1.0389402227978,1.62241263067758,0,0,0,0,0.780722657776222,1.37941262660084,1.44049703844279,2.10986744970001,3.81004395247436,3.58718416797579,5.528401749024,0,0.215567992932842,0.756424320671277,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,1.74937841044784,0,0,0.639864751605702,0.232236671860439,0.902072229254653,0,0.444756087689741,0.570676878337677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.87538698547525,0,0,1.26203287766503,1.56175497718655,3.66219776145758,0.716906393857656,2.45078541490634,1.98153571552183,1.61924280669958,3.50707029493574,4.74345333535828,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.38307724027652,1.8006109403131,1.4229455216103,0.214337035031592,1.24138163549592,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,3.15224842256954,0.906284817968409,2.07104124700728,0.518936737920883,4.38927360741134,2.04880326904961,1.45864030240976,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,1.60459604795908,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.704276676453562,0.574354689556133,1.42888107384922,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,0,0.872078499793971,0.752875043322645,0.423073039458382,0.182927972872773,0.263069711437843,1.22223702461276,0.561142271657738,0.474540072496697,0.689531376628944,0,1.08455788830176,0.771626443924566,0.749431733813838,0.233931608445408,1.71896843238639,0.191288332068843,0,0
|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,1.75507719831198,1.47227472945967,0.571301968807607,0.220868540951614,1.22490799214954,2.01275489138296,2.75765635983006,1.10115880999389,0.638436690425939,1.0752457327937,1.31886287730194,2.47016637726506,1.56274011167028,0.279182999001381,2.25105044012672,1.22238598221448,2.35702868378934,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39665023047716,0.915001205637253,4.90051973240171,1.56441888173049,2.30143911597297,1.0389402227978,1.62241263067758,0,0,0,0,0.780722657776222,1.37941262660084,1.44049703844279,2.10986744970001,3.81004395247436,3.58718416797579,5.528401749024,0,0.215567992932842,0.756424320671277,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,1.74937841044784,0,0,0.639864751605702,0.232236671860439,0.902072229254653,0,0.444756087689741,0.570676878337677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.87538698547525,0,0,1.26203287766503,1.56175497718655,3.66219776145758,0.716906393857656,2.45078541490634,1.98153571552183,1.61924280669958,3.50707029493574,4.74345333535828,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.38307724027652,1.8006109403131,1.4229455216103,0.214337035031592,1.24138163549592,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,3.15224842256954,0.906284817968409,2.07104124700728,0.518936737920883,4.38927360741134,2.04880326904961,1.45864030240976,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,1.60459604795908,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.704276676453562,0.574354689556133,1.42888107384922,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,0,0.872078499793971,0.752875043322645,0.423073039458382,0.182927972872773,0.263069711437843,1.22223702461276,0.561142271657738,0.474540072496697,0.689531376628944,0,1.08455788830176,0.771626443924566,0.749431733813838,0.233931608445408,1.71896843238639,0.191288332068843,0,0
|short_description=p3@Miat
|short_description=p3@Miat
}}
}}

Revision as of 18:34, 14 November 2012

Short description:p3@Miat
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Miat_5end
Coexpression cluster:NA
Association with transcript: 137bp_to_ENSMUST00000146058, NR_003718, NR_033657, uc008ysk.2, uc008ysl.2, uc008ysm.2, uc008ysn.2, uc008yso.2, uc008ysp.2, uc008ysq.2, uc008ysr.2, uc008yss.2, uc012ebf.1_5end
EntrezGene:Miat
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Miat

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.20e-3773
ectoderm-derived structure5.60e-3795
ectoderm5.60e-3795
presumptive ectoderm5.60e-3795
nervous system7.10e-3675
neurectoderm2.63e-3564
neural plate2.63e-3564
presumptive neural plate2.63e-3564
ecto-epithelium1.60e-3273
pre-chordal neural plate1.36e-3149
regional part of nervous system2.08e-2654
anterior neural tube2.35e-2640
neural tube2.91e-2652
neural rod2.91e-2652
future spinal cord2.91e-2652
neural keel2.91e-2652
regional part of brain2.06e-2546
regional part of forebrain5.18e-2539
forebrain5.18e-2539
future forebrain5.18e-2539
brain1.14e-2447
future brain1.14e-2447
structure with developmental contribution from neural crest3.47e-2392
brain grey matter2.79e-2229
regional part of telencephalon2.79e-2229
telencephalon2.79e-2229
gray matter1.13e-2134
cerebral cortex2.96e-1721
cerebral hemisphere2.96e-1721
pallium2.96e-1721
regional part of cerebral cortex5.25e-1317
autonomic nervous system3.28e-109
occipital lobe3.08e-0910
visual cortex3.08e-0910
neocortex3.08e-0910
peripheral nervous system4.92e-0811
anatomical conduit6.38e-07122
tube7.70e-07114
sense organ8.84e-0712
sensory system8.84e-0712
entire sense organ system8.84e-0712







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:112657789..112657830,-&oldid=2335326"