Personal tools

FFCP PHASE1:Mm9::chr9:66440913..66440927,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_5_at_Usp3_5end
|description=CAGE_peak_5_at_Usp3_5end
|id=chr9:66440913..66440927,-
|id=chr9:66440913..66440927,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=1.12104192973356,3.48975407639361,3.18499467572675,2.72217790176147,5.00895729946347,1.84667199103079,1.40167584357315,3.22808308603941,3.51971805379167,2.80877431586392,1.02730780935303,1.67521533890206,2.39681021903688,2.18551006047494,1.66554880907831,0.202475267389826,0.699561878128147,1.73504190947031,2.4680598049033,1.27316895539409,2.97651515528744,1.09220046320974,1.30599894569468,1.91990907352088,0.91763712426868,1.72269589234506,2.58457197695445,2.80112602491656,1.90023419456374,1.76421090831952,1.33038306393183,1.90509202037889,0.61506478758457,0,1.73310971850765,0.498703936075477,1.22501613757421,6.69650609179052,0.7813353445238,2.09409497589519,3.52938892818609,5.46436387966757,2.42755176515577,1.00717454380462,0.811015449756117,1.83546752161682,0.782391344348039,0.436050312760893,0,1.1665793944457,0.419959264876088,1.43752564364972,2.68452169692378,2.90144856804538,4.36921938885203,0.771778308107841,0.85960031981627,3.09403255366465,1.82084814773638,0.528990979272033,1.26766280701236,1.35537812827653,1.77858959222228,0.899899717281399,0,0.7104801149461,0.299600110518405,1.15265491596466,2.38486108309499,2.70011876663381,2.73422449756797,0.285650984403804,1.10434270475807,1.46988959057945,3.06705507258356,0.919218786610021,1.10115880999389,0.510749352340751,1.22885226604995,0.791317726381163,1.55528994124096,2.6045668527838,1.3959149950069,1.12552522006336,1.5279824777681,2.06240009831567,0.996601765593721,1.1183966749518,0.832988126665025,0.831287161174641,2.31891590961342,0,1.3599426674155,0,0.649776417447669,1.34408066129201,1.40444420131752,0.852151612890289,0.779358013808606,0.35333957451034,0.845060518660083,3.84979432242953,0,0,0.649473123033642,1.52015919285059,1.51657333504435,2.62622923353838,2.33044095282455,2.07818994690755,0.346970653532272,1.52232739156071,0.461230994512117,0.60289056221049,1.29347577849275,0.879666139307728,1.97755974187499,1.15679485535929,1.76922110389975,0.808834249737046,1.32504911076236,1.93950101254089,1.86391761218122,5.27005434620785,2.51336048176146,1.53274233125155,0.838705871541442,0.599902730993408,1.14363204365758,0.898743836428936,2.28750301409313,1.38219787324151,1.56441888173049,1.02286182932132,1.0389402227978,0.973447578406546,1.12023300235348,0.497627882440372,1.51633655060205,0.631325567659422,1.04096354370163,0.689706313300419,1.0803727788321,1.05493372485001,1.76894897793452,1.40925092313335,0.843315521037559,0.258703370739016,2.15567992932842,1.51284864134255,1.40760899331159,1.7535658594206,0.834141747676794,0.348252166522167,0.823128545631774,0.796137067273973,1.40442637462647,1.28673953557358,0.284163499395593,0.414251545071004,0.469052119962192,1.2604344302271,1.18372367792605,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,0.583826711835847,1.15191894939436,1.14917224855367,0.648550476366846,0.730999937126662,1.09775057645525,0.671032093801859,1.05144974282064,1.85228302282712,3.63460661282178,1.32225283331772,0.853153002140936,1.39342003116263,2.44848176511977,2.01683524623343,2.2237804384487,3.23383564391351,2.84717436926707,2.47048432086016,3.01602250560323,3.38226002469956,2.72949721966768,1.79763881730844,1.29682829924817,1.99141273254367,1.51734320762465,1.02823661348756,1.1270773567308,2.44381593414377,1.35766741017338,0.911765658574141,1.26473074248515,0.738050739898011,1.09899109488962,0.863780147452604,2.37162101669719,1.66845105716094,1.17935397067922,0.449724224769707,1.42002084971952,1.20588579876208,1.01850340712568,1.72617682470486,1.78348749452539,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,0.717589654087649,1.92977408545347,1.84753190166605,1.13694847062291,1.46668478797823,1.18821560042632,1.40814148973101,1.50755631697634,1.6663054862021,1.56106918286239,1.57635144106191,0.44292937929755,1.2756381492599,1.63863314715738,1.55416483679306,1.15719246865209,7.53956419696361,4.35124547054968,0,0.827810238914197,0.80275294993896,0.468846746368813,1.3114795630134,1.26235463602186,2.2085575359138,1.17131623288992,0.861693590931196,1.91175038362042,0.891194696329576,2.26461224631066,0.809621403349789,1.46127928955656,3.16230222357219,2.57057053137446,2.12910127812403,1.06839362200353,1.46598263418218,1.31976098378028,1.32745138339963,1.94224508923985,0.906970670894253,0.754420319023592,1.77181135728464,0.922305443831782,1.80899805217755,1.45413491791002,0.712994756769443,1.58018378967908,0,0,3.40439605753788,0.720244376125241,1.29358683782755,1.50035924522115,0.532020700926821,1.42695054081656,1.48094118541909,0.608929898229199,1.87737366450968,1.48282449604674,1.54369878638473,0.98931751764888,1.45317984026315,0.482503399425247,1.19372344003136,1.47726809770555,3.20628920292836,0.556275906031529,0.854354403989263,1.857481811669,0.740778109478847,1.13021074202815,1.6403307326523,1.14389086603261,1.01987057996313,0.979660166265606,1.52019971184866,0,0.949007980743406,1.42323626988794,1.08005340821801,0.418176592028937,1.31017538247707,0.944050424693745,0.743881101528023,1.04702376793612,1.68499465279331,0.621339313086926,18.6018669765783,0.598066184175915,1.32366792365678,3.11121901350476,4.52059382172059,3.8859908862879,2.11243029562357,3.25510962109875,4.08951443260272,5.07326653734613,5.47257011889944,1.89606672376907,1.01362607645082,1.02710957164827,2.07873316764472,1.79026695667481,1.78813219303138,1.08175904567972,2.21534290761866,1.21159739937777,1.905170166375,1.41156659191577,2.33898913775406,1.15454209968395,2.45441494581295,1.58711268530648,1.99787358036658,1.16628013592318,3.02192309455341,1.9318959403219,0.563047426353546,1.46521299413812,1.07184189539533,1.00314420807073,0.564751842617067,0,2.29158205375759,1.3748254587495,1.37016503954128,0,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,1.97195960409936,0,1.87806966329548,1.21553358534147,1.04806581313991,1.10306105070008,2.00022055021454,1.03017528619447,0,1.01078884705519,1.52087579934144,1.32038438970253,0.842773567228942,0.768301828858431,0.918967503289812,1.42888107384922,1.50649623728312,1.35036454324594,2.06042950401653,1.61918812147837,1.02860775715625,0.887379030796687,0.476872379894642,1.59881058295561,0.752875043322645,0.676916863133412,0.73171189149109,1.31534855718921,0.814824683075171,2.80571135828869,1.89816028998679,0.985044823755635,2.04615521584845,1.23949472948773,0.771626443924566,0.749431733813838,0.701794825336225,0.859484216193193,0.956441660344217,1.54413993383661,0.695603506861264
|phase1_expression=1.12104192973356,3.48975407639361,3.18499467572675,2.72217790176147,5.00895729946347,1.84667199103079,1.40167584357315,3.22808308603941,3.51971805379167,2.80877431586392,1.02730780935303,1.67521533890206,2.39681021903688,2.18551006047494,1.66554880907831,0.202475267389826,0.699561878128147,1.73504190947031,2.4680598049033,1.27316895539409,2.97651515528744,1.09220046320974,1.30599894569468,1.91990907352088,0.91763712426868,1.72269589234506,2.58457197695445,2.80112602491656,1.90023419456374,1.76421090831952,1.33038306393183,1.90509202037889,0.61506478758457,0,1.73310971850765,0.498703936075477,1.22501613757421,6.69650609179052,0.7813353445238,2.09409497589519,3.52938892818609,5.46436387966757,2.42755176515577,1.00717454380462,0.811015449756117,1.83546752161682,0.782391344348039,0.436050312760893,0,1.1665793944457,0.419959264876088,1.43752564364972,2.68452169692378,2.90144856804538,4.36921938885203,0.771778308107841,0.85960031981627,3.09403255366465,1.82084814773638,0.528990979272033,1.26766280701236,1.35537812827653,1.77858959222228,0.899899717281399,0,0.7104801149461,0.299600110518405,1.15265491596466,2.38486108309499,2.70011876663381,2.73422449756797,0.285650984403804,1.10434270475807,1.46988959057945,3.06705507258356,0.919218786610021,1.10115880999389,0.510749352340751,1.22885226604995,0.791317726381163,1.55528994124096,2.6045668527838,1.3959149950069,1.12552522006336,1.5279824777681,2.06240009831567,0.996601765593721,1.1183966749518,0.832988126665025,0.831287161174641,2.31891590961342,0,1.3599426674155,0,0.649776417447669,1.34408066129201,1.40444420131752,0.852151612890289,0.779358013808606,0.35333957451034,0.845060518660083,3.84979432242953,0,0,0.649473123033642,1.52015919285059,1.51657333504435,2.62622923353838,2.33044095282455,2.07818994690755,0.346970653532272,1.52232739156071,0.461230994512117,0.60289056221049,1.29347577849275,0.879666139307728,1.97755974187499,1.15679485535929,1.76922110389975,0.808834249737046,1.32504911076236,1.93950101254089,1.86391761218122,5.27005434620785,2.51336048176146,1.53274233125155,0.838705871541442,0.599902730993408,1.14363204365758,0.898743836428936,2.28750301409313,1.38219787324151,1.56441888173049,1.02286182932132,1.0389402227978,0.973447578406546,1.12023300235348,0.497627882440372,1.51633655060205,0.631325567659422,1.04096354370163,0.689706313300419,1.0803727788321,1.05493372485001,1.76894897793452,1.40925092313335,0.843315521037559,0.258703370739016,2.15567992932842,1.51284864134255,1.40760899331159,1.7535658594206,0.834141747676794,0.348252166522167,0.823128545631774,0.796137067273973,1.40442637462647,1.28673953557358,0.284163499395593,0.414251545071004,0.469052119962192,1.2604344302271,1.18372367792605,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,0.583826711835847,1.15191894939436,1.14917224855367,0.648550476366846,0.730999937126662,1.09775057645525,0.671032093801859,1.05144974282064,1.85228302282712,3.63460661282178,1.32225283331772,0.853153002140936,1.39342003116263,2.44848176511977,2.01683524623343,2.2237804384487,3.23383564391351,2.84717436926707,2.47048432086016,3.01602250560323,3.38226002469956,2.72949721966768,1.79763881730844,1.29682829924817,1.99141273254367,1.51734320762465,1.02823661348756,1.1270773567308,2.44381593414377,1.35766741017338,0.911765658574141,1.26473074248515,0.738050739898011,1.09899109488962,0.863780147452604,2.37162101669719,1.66845105716094,1.17935397067922,0.449724224769707,1.42002084971952,1.20588579876208,1.01850340712568,1.72617682470486,1.78348749452539,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,0.717589654087649,1.92977408545347,1.84753190166605,1.13694847062291,1.46668478797823,1.18821560042632,1.40814148973101,1.50755631697634,1.6663054862021,1.56106918286239,1.57635144106191,0.44292937929755,1.2756381492599,1.63863314715738,1.55416483679306,1.15719246865209,7.53956419696361,4.35124547054968,0,0.827810238914197,0.80275294993896,0.468846746368813,1.3114795630134,1.26235463602186,2.2085575359138,1.17131623288992,0.861693590931196,1.91175038362042,0.891194696329576,2.26461224631066,0.809621403349789,1.46127928955656,3.16230222357219,2.57057053137446,2.12910127812403,1.06839362200353,1.46598263418218,1.31976098378028,1.32745138339963,1.94224508923985,0.906970670894253,0.754420319023592,1.77181135728464,0.922305443831782,1.80899805217755,1.45413491791002,0.712994756769443,1.58018378967908,0,0,3.40439605753788,0.720244376125241,1.29358683782755,1.50035924522115,0.532020700926821,1.42695054081656,1.48094118541909,0.608929898229199,1.87737366450968,1.48282449604674,1.54369878638473,0.98931751764888,1.45317984026315,0.482503399425247,1.19372344003136,1.47726809770555,3.20628920292836,0.556275906031529,0.854354403989263,1.857481811669,0.740778109478847,1.13021074202815,1.6403307326523,1.14389086603261,1.01987057996313,0.979660166265606,1.52019971184866,0,0.949007980743406,1.42323626988794,1.08005340821801,0.418176592028937,1.31017538247707,0.944050424693745,0.743881101528023,1.04702376793612,1.68499465279331,0.621339313086926,18.6018669765783,0.598066184175915,1.32366792365678,3.11121901350476,4.52059382172059,3.8859908862879,2.11243029562357,3.25510962109875,4.08951443260272,5.07326653734613,5.47257011889944,1.89606672376907,1.01362607645082,1.02710957164827,2.07873316764472,1.79026695667481,1.78813219303138,1.08175904567972,2.21534290761866,1.21159739937777,1.905170166375,1.41156659191577,2.33898913775406,1.15454209968395,2.45441494581295,1.58711268530648,1.99787358036658,1.16628013592318,3.02192309455341,1.9318959403219,0.563047426353546,1.46521299413812,1.07184189539533,1.00314420807073,0.564751842617067,0,2.29158205375759,1.3748254587495,1.37016503954128,0,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,1.97195960409936,0,1.87806966329548,1.21553358534147,1.04806581313991,1.10306105070008,2.00022055021454,1.03017528619447,0,1.01078884705519,1.52087579934144,1.32038438970253,0.842773567228942,0.768301828858431,0.918967503289812,1.42888107384922,1.50649623728312,1.35036454324594,2.06042950401653,1.61918812147837,1.02860775715625,0.887379030796687,0.476872379894642,1.59881058295561,0.752875043322645,0.676916863133412,0.73171189149109,1.31534855718921,0.814824683075171,2.80571135828869,1.89816028998679,0.985044823755635,2.04615521584845,1.23949472948773,0.771626443924566,0.749431733813838,0.701794825336225,0.859484216193193,0.956441660344217,1.54413993383661,0.695603506861264
|short_description=p5@Usp3
|short_description=p5@Usp3
}}
}}

Revision as of 07:53, 19 April 2012

Short description:p5@Usp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Usp3_5end
Coexpression cluster:NA
Association with transcript: 21bp_to_ENSMUST00000127569_5end
EntrezGene:Usp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Usp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G518.60
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:66440913..66440927,-&oldid=1046439"