FFCP PHASE1:Mm9::chr17:27759730..27759799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56409 | |EntrezGene=56409 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B2KF67 | |UniProt=B2KF67 | ||
|association_with_transcript=109bp_to_ENSMUST00000114886_5end | |association_with_transcript=109bp_to_ENSMUST00000114886_5end | ||
|cluster_id=chr17:27759730..27759799,- | |||
|description=CAGE_peak_3_at_Nudt3_5end | |description=CAGE_peak_3_at_Nudt3_5end | ||
|id=chr17:27759730..27759799,- | |id=chr17:27759730..27759799,- | ||
|ontology_enrichment_celltype=CL:0002319!6.34e-19!43;CL:0000221!6.82e-19!44;CL:0000133!6.82e-19!44;CL:0000055!1.32e-17!50;CL:0000540!2.26e-14!33;CL:0000047!2.26e-14!33;CL:0000031!2.26e-14!33;CL:0000404!2.26e-14!33;CL:0000393!3.61e-14!39;CL:0000211!3.61e-14!39;CL:0000117!7.16e-13!23;CL:0000337!7.16e-13!23 | |ontology_enrichment_celltype=CL:0002319!6.34e-19!43;CL:0000221!6.82e-19!44;CL:0000133!6.82e-19!44;CL:0000055!1.32e-17!50;CL:0000540!2.26e-14!33;CL:0000047!2.26e-14!33;CL:0000031!2.26e-14!33;CL:0000404!2.26e-14!33;CL:0000393!3.61e-14!39;CL:0000211!3.61e-14!39;CL:0000117!7.16e-13!23;CL:0000337!7.16e-13!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.08e-21,43;CL:0000221,1.18e-21,44;CL:0000133,1.18e-21,44;CL:0000540,2.07e-16,33;CL:0000047,2.07e-16,33;CL:0000031,2.07e-16,33;CL:0000404,2.07e-16,33;CL:0000393,1.09e-15,39;CL:0000211,1.09e-15,39;CL:0000117,1.14e-14,23;CL:0000337,1.14e-14,23;CL:0002321,3.52e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.72e-34!75;UBERON:0001016!7.72e-34!75;UBERON:0001017!3.78e-33!73;UBERON:0005743!3.78e-33!73;UBERON:0004121!6.37e-26!102;UBERON:0000924!6.37e-26!102;UBERON:0006601!6.37e-26!102;UBERON:0001049!5.60e-25!52;UBERON:0005068!5.60e-25!52;UBERON:0006241!5.60e-25!52;UBERON:0007135!5.60e-25!52;UBERON:0002346!6.42e-24!71;UBERON:0003075!6.42e-24!71;UBERON:0007284!6.42e-24!71;UBERON:0000955!2.38e-23!50;UBERON:0006238!2.38e-23!50;UBERON:0002616!3.93e-23!49;UBERON:0000033!1.72e-21!63;UBERON:0002020!1.63e-19!34;UBERON:0003056!5.03e-18!49;UBERON:0003080!1.13e-17!40;UBERON:0002780!3.05e-17!39;UBERON:0001890!3.05e-17!39;UBERON:0006240!3.05e-17!39;UBERON:0002791!7.51e-17!29;UBERON:0003528!7.51e-17!29;UBERON:0001893!7.51e-17!29;UBERON:0000956!2.01e-12!21;UBERON:0001869!2.01e-12!21;UBERON:0000203!2.01e-12!21;UBERON:0002619!1.38e-10!17;UBERON:0007811!4.10e-10!86;UBERON:0000025!6.27e-09!114;UBERON:0000153!3.01e-08!94;UBERON:0003076!6.21e-08!12;UBERON:0003057!6.21e-08!12;UBERON:0004111!9.47e-08!122;UBERON:0002021!3.73e-07!10;UBERON:0000411!3.73e-07!10;UBERON:0001950!3.73e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!7.72e-34!75;UBERON:0001016!7.72e-34!75;UBERON:0001017!3.78e-33!73;UBERON:0005743!3.78e-33!73;UBERON:0004121!6.37e-26!102;UBERON:0000924!6.37e-26!102;UBERON:0006601!6.37e-26!102;UBERON:0001049!5.60e-25!52;UBERON:0005068!5.60e-25!52;UBERON:0006241!5.60e-25!52;UBERON:0007135!5.60e-25!52;UBERON:0002346!6.42e-24!71;UBERON:0003075!6.42e-24!71;UBERON:0007284!6.42e-24!71;UBERON:0000955!2.38e-23!50;UBERON:0006238!2.38e-23!50;UBERON:0002616!3.93e-23!49;UBERON:0000033!1.72e-21!63;UBERON:0002020!1.63e-19!34;UBERON:0003056!5.03e-18!49;UBERON:0003080!1.13e-17!40;UBERON:0002780!3.05e-17!39;UBERON:0001890!3.05e-17!39;UBERON:0006240!3.05e-17!39;UBERON:0002791!7.51e-17!29;UBERON:0003528!7.51e-17!29;UBERON:0001893!7.51e-17!29;UBERON:0000956!2.01e-12!21;UBERON:0001869!2.01e-12!21;UBERON:0000203!2.01e-12!21;UBERON:0002619!1.38e-10!17;UBERON:0007811!4.10e-10!86;UBERON:0000025!6.27e-09!114;UBERON:0000153!3.01e-08!94;UBERON:0003076!6.21e-08!12;UBERON:0003057!6.21e-08!12;UBERON:0004111!9.47e-08!122;UBERON:0002021!3.73e-07!10;UBERON:0000411!3.73e-07!10;UBERON:0001950!3.73e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.25e-39,75;UBERON:0001017,3.32e-38,73;UBERON:0004121,2.94e-31,95;UBERON:0000924,2.94e-31,95;UBERON:0006601,2.94e-31,95;UBERON:0010314,5.87e-30,92;UBERON:0000073,6.22e-30,54;UBERON:0002346,9.22e-30,64;UBERON:0003075,9.22e-30,64;UBERON:0007284,9.22e-30,64;UBERON:0001049,1.02e-28,52;UBERON:0005068,1.02e-28,52;UBERON:0006241,1.02e-28,52;UBERON:0007135,1.02e-28,52;UBERON:0000955,8.10e-25,47;UBERON:0006238,8.10e-25,47;UBERON:0002616,1.43e-24,46;UBERON:0010371,5.17e-24,73;UBERON:0002020,2.24e-22,34;UBERON:0003056,2.58e-20,49;UBERON:0003080,3.07e-20,40;UBERON:0002780,9.69e-20,39;UBERON:0001890,9.69e-20,39;UBERON:0006240,9.69e-20,39;UBERON:0003528,2.76e-19,29;UBERON:0002791,2.76e-19,29;UBERON:0001893,2.76e-19,29;UBERON:0000956,3.75e-14,21;UBERON:0001869,3.75e-14,21;UBERON:0000203,3.75e-14,21;UBERON:0002619,5.05e-12,17;UBERON:0000025,4.27e-11,114;UBERON:0004111,6.12e-10,122;UBERON:0003076,5.98e-09,12;UBERON:0003057,5.98e-09,12;UBERON:0002021,4.76e-08,10;UBERON:0000411,4.76e-08,10;UBERON:0001950,4.76e-08,10 | |||
|phase1_expression=1.92178616525753,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,0,0,0.159544317990673,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.157731082679119,0,0,2.72138528483423,3.17731043842833,4.17919662622297,0.159992422793407,0.68822784320151,0,0,0.430942465371778,0,0.504060259519861,0.665191531965914,3.81018404075779,1.23012957516914,0,0,0,0.204169356262369,4.60384793810598,3.906676722619,4.71171369576418,3.52938892818609,2.04913645487534,2.91306211818692,2.39203954153597,1.52065396829272,2.20256102594018,6.25913075478431,7.84890562969608,9.22681967484782,7.77719596297134,7.8392396110203,2.87505128729943,0.503347818173209,0,0,1.54355661621568,0.85960031981627,2.57836046138721,9.71119012126069,6.34789175126439,5.07065122804943,10.8430250262122,6.22506357277798,4.49949858640699,0,0,6.5912024314049,9.60545763303886,7.46565208621039,6.07526722492608,4.20649922702764,9.99778445413313,10.6016899656774,6.73699395682247,8.24271050756833,6.43453150627015,5.50579404996943,10.4703617229854,8.60196586234964,9.36392642884376,12.5338071735301,11.4600941522487,15.0758819460746,6.19038871034848,7.79271063661732,5.89257170947335,6.83384067835694,6.33758115806022,3.48340489332647,3.17400552448499,0.579728977403356,0,0,0,0,0,1.26399978118577,2.89731548382698,3.37721805983729,4.59341446863442,1.83096445709685,3.84979432242953,0,0,0,0,1.01104889002957,0.45673551887624,0.258937883647172,1.7813056687779,0.867426633830679,0.608930956624282,0.691846491768175,1.95939432718409,1.17588707135705,0.125666591329675,0.741584903203122,0.433798070759735,2.65383165584962,1.45590164952668,1.10420759230197,0.969750506270444,0,10.8328894894272,19.2690970268379,0.510914110417183,0.958520996047362,0,0.508280908292259,5.84183493678809,6.40500843946077,5.02617408451458,11.298580812498,12.2743419518559,8.10373373782284,8.11206315338788,0.305518091550949,1.11966273549084,0.505445516867349,0.631325567659422,1.04096354370163,1.60931473103431,1.62055916824814,2.56198190320716,2.38127747029647,4.61209393025459,4.12287588062807,3.10444044886819,0.646703978798527,0,0.703804496655795,1.09597866213787,0.556094498451196,0.696504333044333,0.205782136407943,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,1.24275463521301,0.469052119962192,1.2604344302271,1.65721314909647,3.34499193970586,4.16521204795921,6.74348439776183,6.9751084363901,5.95503246072564,5.26591519723137,5.25335885053105,4.70199095365963,4.38599962275997,3.07370161407471,3.22095405024892,7.36014819974445,6.5858951922742,0.330418782983798,0,0,0.928946687441754,0.902072229254653,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,0.407302655690628,0.193952487167626,0.561086559122548,0.126473074248515,0.442830443938806,0.627994911365499,0.493588655687202,0.296452627087149,0.333690211432188,0,0.224862112384854,0.405720242777006,0,0,0.287696137450811,1.13494658742525,0,5.75072826109418,0,0,0,0.179397413521912,0.482443521363367,0.923765950833023,0.189491411770485,0.488894929326078,0.678980343100753,0.938760993154008,0.502518772325447,0.714130922658041,0.390267295715598,0.472905432318573,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,8.99083303931635,10.7834751664827,1.80328439914343,1.26235463602186,3.78609863299508,2.34263246577983,3.66219776145758,3.82350076724083,2.67358408898873,1.98153571552183,2.02405350837447,3.21481443702443,3.95287777946523,2.89189184779626,0.141940085208269,0.712262414669021,0.162886959353576,0.329940245945071,0,0.485561272309963,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.70219802876894,1.26042765821917,1.68166288917581,1.50035924522115,2.30542303734956,1.42695054081656,2.46823530903181,1.8267896946876,0.938686832254841,0.63549621259146,0.220528398054962,0.49465875882444,0,0.663442174209714,0.477489376012546,0.164140899745061,0.291480836629851,12.0526446306831,0.341741761595705,0.619160603889667,0,0.753473828018764,0.956859594047176,0.686334519619568,2.03974115992626,0.839708713941948,1.10559979043539,0.954670618015114,0.949007980743406,0.609958401380546,0.86404272657441,0.418176592028937,0.436725127492355,0.404593039154462,0.495920734352016,0.26175594198403,0.259229946583586,0,0.56369293868419,0.448549638131936,0,1.16670713006429,0.904118764344118,1.01373675294467,0.58678619322877,0.911430693907651,1.57289016638566,1.44950472495604,1.72818003754719,0.316011120628178,0.810900861160657,0.616265742988964,0.51968329191118,0.179026695667481,0.39736270956253,0.600977247599844,0.443068581523732,0.605798699688886,0.762068066549998,0.302478555410522,0.38983152295901,0.673482891482306,0.116876902181569,0,0.887943813496259,0.807424709485281,0.839423081820392,0.772758376128762,0.187682475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| ||
|short_description=p3@Nudt3 | |short_description=p3@Nudt3 | ||
}} | }} |
Latest revision as of 03:44, 26 September 2015
Short description: | p3@Nudt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nudt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 109bp_to_ENSMUST00000114886_5end |
EntrezGene: | Nudt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.08e-21 | 43 |
ectodermal cell | 1.18e-21 | 44 |
neurectodermal cell | 1.18e-21 | 44 |
neuron | 2.07e-16 | 33 |
neuronal stem cell | 2.07e-16 | 33 |
neuroblast | 2.07e-16 | 33 |
electrically signaling cell | 2.07e-16 | 33 |
electrically responsive cell | 1.09e-15 | 39 |
electrically active cell | 1.09e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.14e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-14 | 23 |
embryonic cell | 3.52e-10 | 70 |