FFCP PHASE1:Mm9::chr17:25153288..25153368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106633 | |EntrezGene=106633 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PY46 | |UniProt=E9PY46 | ||
|association_with_transcript=0bp_to_ENSMUST00000024983,ENSMUST00000151776_5end | |association_with_transcript=0bp_to_ENSMUST00000024983,ENSMUST00000151776_5end | ||
|cluster_id=chr17:25153288..25153368,+ | |||
|description=CAGE_peak_1_at_Ift140_5end | |description=CAGE_peak_1_at_Ift140_5end | ||
|id=chr17:25153288..25153368,+ | |id=chr17:25153288..25153368,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.78e-13!44;CL:0000133!1.78e-13!44;CL:0002319!2.36e-13!43;CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23;CL:0000055!1.18e-08!50;CL:0000393!2.17e-08!39;CL:0000211!2.17e-08!39 | |ontology_enrichment_celltype=CL:0000221!1.78e-13!44;CL:0000133!1.78e-13!44;CL:0002319!2.36e-13!43;CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23;CL:0000055!1.18e-08!50;CL:0000393!2.17e-08!39;CL:0000211!2.17e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.78e-13,44;CL:0000133,1.78e-13,44;CL:0002319,2.36e-13,43;CL:0000540,1.04e-12,33;CL:0000047,1.04e-12,33;CL:0000031,1.04e-12,33;CL:0000404,1.04e-12,33;CL:0000117,9.14e-09,23;CL:0000337,9.14e-09,23;CL:0000393,2.17e-08,39;CL:0000211,2.17e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.12e-26!73;UBERON:0005743!2.12e-26!73;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0004121!2.76e-21!102;UBERON:0000924!2.76e-21!102;UBERON:0006601!2.76e-21!102;UBERON:0002346!8.46e-18!71;UBERON:0003075!8.46e-18!71;UBERON:0007284!8.46e-18!71;UBERON:0000955!1.82e-17!50;UBERON:0006238!1.82e-17!50;UBERON:0003080!3.41e-17!40;UBERON:0002020!5.71e-17!34;UBERON:0001049!5.90e-17!52;UBERON:0005068!5.90e-17!52;UBERON:0006241!5.90e-17!52;UBERON:0007135!5.90e-17!52;UBERON:0002780!6.19e-17!39;UBERON:0001890!6.19e-17!39;UBERON:0006240!6.19e-17!39;UBERON:0002616!8.30e-17!49;UBERON:0002791!4.41e-16!29;UBERON:0003528!4.41e-16!29;UBERON:0001893!4.41e-16!29;UBERON:0000153!6.17e-16!94;UBERON:0003056!6.44e-16!49;UBERON:0000033!9.02e-16!63;UBERON:0007811!3.11e-15!86;UBERON:0000956!4.02e-14!21;UBERON:0001869!4.02e-14!21;UBERON:0000203!4.02e-14!21;UBERON:0002619!6.12e-12!17;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!2.12e-26!73;UBERON:0005743!2.12e-26!73;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0004121!2.76e-21!102;UBERON:0000924!2.76e-21!102;UBERON:0006601!2.76e-21!102;UBERON:0002346!8.46e-18!71;UBERON:0003075!8.46e-18!71;UBERON:0007284!8.46e-18!71;UBERON:0000955!1.82e-17!50;UBERON:0006238!1.82e-17!50;UBERON:0003080!3.41e-17!40;UBERON:0002020!5.71e-17!34;UBERON:0001049!5.90e-17!52;UBERON:0005068!5.90e-17!52;UBERON:0006241!5.90e-17!52;UBERON:0007135!5.90e-17!52;UBERON:0002780!6.19e-17!39;UBERON:0001890!6.19e-17!39;UBERON:0006240!6.19e-17!39;UBERON:0002616!8.30e-17!49;UBERON:0002791!4.41e-16!29;UBERON:0003528!4.41e-16!29;UBERON:0001893!4.41e-16!29;UBERON:0000153!6.17e-16!94;UBERON:0003056!6.44e-16!49;UBERON:0000033!9.02e-16!63;UBERON:0007811!3.11e-15!86;UBERON:0000956!4.02e-14!21;UBERON:0001869!4.02e-14!21;UBERON:0000203!4.02e-14!21;UBERON:0002619!6.12e-12!17;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.12e-26,73;UBERON:0001016,1.25e-24,75;UBERON:0004121,1.48e-20,95;UBERON:0000924,1.48e-20,95;UBERON:0006601,1.48e-20,95;UBERON:0000073,5.04e-18,54;UBERON:0002346,2.16e-17,64;UBERON:0003075,2.16e-17,64;UBERON:0007284,2.16e-17,64;UBERON:0003080,3.41e-17,40;UBERON:0002020,5.71e-17,34;UBERON:0001049,5.90e-17,52;UBERON:0005068,5.90e-17,52;UBERON:0006241,5.90e-17,52;UBERON:0007135,5.90e-17,52;UBERON:0002780,6.19e-17,39;UBERON:0001890,6.19e-17,39;UBERON:0006240,6.19e-17,39;UBERON:0000955,7.09e-17,47;UBERON:0006238,7.09e-17,47;UBERON:0002616,3.22e-16,46;UBERON:0003528,4.41e-16,29;UBERON:0002791,4.41e-16,29;UBERON:0001893,4.41e-16,29;UBERON:0003056,6.44e-16,49;UBERON:0010371,7.12e-16,73;UBERON:0000956,4.02e-14,21;UBERON:0001869,4.02e-14,21;UBERON:0000203,4.02e-14,21;UBERON:0002619,6.12e-12,17;UBERON:0010314,1.86e-08,92;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10 | |||
|phase1_expression=17.9366708757369,6.97950815278722,6.3699893514535,11.7961042409664,6.51164448930251,13.766100296775,10.9797941079897,19.1102518693533,3.94208422024667,6.31974221069382,2.73948749160808,3.27065851880879,15.5792664237397,21.9425210071683,14.6568295198892,19.0326751346436,16.0899231969474,21.7668894097184,26.4630856859076,14.429248161133,17.6039610612714,19.2624445329717,17.7615856614476,10.3995074815714,9.40578052375397,6.31655160526522,6.03066794622705,4.74036711908956,7.41091335879858,8.31699428207772,4.43461021310609,21.5910428976275,15.9916844771988,0,15.0202842270663,10.3065480122265,10.4126371693808,9.62622750694888,2.3440060335714,7.32933241563318,5.88231488031014,4.78131839470912,7.2826552954673,10.7012295279241,7.80602370390262,7.52541683862894,9.38869613217647,25.5089432965122,30.5363794000916,25.2758868796568,21.2779360870551,34.5006154475932,15.6037823633695,20.3101399763176,23.8626597391149,9.51859913333004,13.1805382371828,11.8604581223812,25.4918740683093,21.1596391708813,31.0577387718028,6.09920157724438,11.5608323494448,10.3488467487361,15.8218618010716,12.0781619540837,20.0732074047331,30.3532461204028,27.5814368740551,31.0513658162889,30.9177693186532,19.7099179238624,21.6451170132581,26.8254850280749,30.9580871388903,37.6879702510109,25.3266526298594,16.4716666129892,19.6616362567992,25.0583946687368,23.7867873366265,23.4411016750542,13.1216009530649,23.6360296213306,22.9197371665215,23.8649154233671,16.7998583342941,20.3175395949578,6.05809546665472,12.3937358575128,16.232411367294,3.44169550792555,2.719885334831,11.873470216032,9.74664626171504,12.0967259516281,10.8142203501449,9.54409806437123,9.61208217030615,8.12681021373782,18.8730182500752,17.9657068380045,20.3844191765317,7.11066703153331,5.62876706629157,5.32055717497707,8.59391556525132,9.24889425724386,19.4203412735379,20.336573051881,15.6136794089522,21.3125834818499,16.6043158024362,16.1273225391306,20.695612455884,15.2056575508907,7.66304399976559,13.4477401935518,16.8076004870476,10.676612096529,12.367125033782,14.0613823409214,16.775258509631,19.6163133997737,14.8707161837553,10.2182822083437,15.6957813102756,8.99854096490112,12.9611631614526,20.8208988772704,23.33253074375,25.8847965352501,23.9877561865342,28.640131220997,16.4152555202052,23.6872244078926,17.0071737630028,17.6657898266332,21.2287117084287,12.2056276414155,18.9975846725547,11.7250073261071,17.1059023315082,13.5634336052144,16.4648327946213,20.8825364064305,16.3978017979525,28.1986674105527,18.7544153851573,21.3689870589636,15.3077478022636,17.0972671293508,20.2974491934686,16.0195996600197,14.1989674121481,21.0976322827603,13.3420505589515,7.97778512055617,11.0823764764281,7.04227626620706,13.3679854189225,6.84235833551856,10.8902578369197,12.0026181365916,10.9529650150039,12.0917651270212,12.6088498657821,9.34122738937356,5.9241545968853,10.0142153088248,8.10688095458557,8.33339928324394,8.78200461164202,8.99183005694491,28.5994330047213,31.9004298375782,10.9038198384653,6.61126416658861,20.9022485524529,18.8111704206955,13.6599509001419,14.5212137728807,15.7888411129858,9.70150693174052,7.59246498471219,10.0466362381647,10.5560787696113,13.5290400987983,8.96834800747953,8.98819408654222,13.1844210423563,11.948476395262,18.2081184914958,16.5660343284107,16.9061603509621,14.8665469327079,21.1408211012712,15.7805594753217,18.2121226917861,16.0895061297766,14.9148791449306,11.8461277364928,8.59712618552732,16.017130148745,15.7247196090562,15.0657615297852,18.0545508035768,12.3000351473733,14.0044218479781,12.3709339103849,8.2688965655268,8.23684239564244,10.0637744569148,16.3742016974142,5.92871578917665,12.6289438973556,8.25228102200796,13.5084185981743,13.6717360723287,14.5908387063273,15.1557428091084,15.7862929770925,19.7139808562342,17.5881570313907,16.663054862021,13.8544889979037,13.24135210492,15.0595988961167,12.9158362612565,16.2224681568581,12.2606337124786,14.3202567995696,7.53956419696361,16.3171705145613,9.34352118736169,14.3487108078461,16.6972613587304,16.175212749724,9.01642199571715,6.5642441073137,19.8770178232242,22.2550084249084,29.2975820916607,23.1799734013975,26.9586395639697,24.6276581786284,26.3126956088681,27.179794785752,25.693705566524,32.7747742750243,21.8587731220734,24.9291845134157,19.7093220817827,24.5805483229078,13.2745138339963,15.2951800777638,7.55808892411878,10.1846743068185,15.0603965369194,11.0676653259814,11.62927319257,11.9966130727577,13.1904030002347,10.7452497698177,10.5418608574999,8.25084345985495,17.3624198934432,17.2858650270058,32.7277469970369,20.5763553630329,20.0394464015769,15.6964559489822,16.6194510808142,21.0080814889074,11.2642419870581,9.32061111800809,19.1859706307817,14.3451040059088,19.0528023501169,14.8972924572545,16.4733834724328,13.6236946788401,14.8655226681224,13.7214723487777,15.7201210334024,14.859854493352,12.9636169158798,16.0113188453987,23.5114071680163,18.9885883761414,21.4172821792258,19.3133004206648,16.8603968041397,9.54670618015114,18.8219916180776,18.298752041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| ||
|short_description=p1@Ift140 | |short_description=p1@Ift140 | ||
}} | }} |
Latest revision as of 02:08, 26 September 2015
Short description: | p1@Ift140 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ift140_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000024983, ENSMUST00000151776_5end |
EntrezGene: | Ift140 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.78e-13 | 44 |
neurectodermal cell | 1.78e-13 | 44 |
neural cell | 2.36e-13 | 43 |
neuron | 1.04e-12 | 33 |
neuronal stem cell | 1.04e-12 | 33 |
neuroblast | 1.04e-12 | 33 |
electrically signaling cell | 1.04e-12 | 33 |
CNS neuron (sensu Vertebrata) | 9.14e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.14e-09 | 23 |
electrically responsive cell | 2.17e-08 | 39 |
electrically active cell | 2.17e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.12e-26 | 73 |
nervous system | 1.25e-24 | 75 |
ectoderm-derived structure | 1.48e-20 | 95 |
ectoderm | 1.48e-20 | 95 |
presumptive ectoderm | 1.48e-20 | 95 |
regional part of nervous system | 5.04e-18 | 54 |
neurectoderm | 2.16e-17 | 64 |
neural plate | 2.16e-17 | 64 |
presumptive neural plate | 2.16e-17 | 64 |
anterior neural tube | 3.41e-17 | 40 |
gray matter | 5.71e-17 | 34 |
neural tube | 5.90e-17 | 52 |
neural rod | 5.90e-17 | 52 |
future spinal cord | 5.90e-17 | 52 |
neural keel | 5.90e-17 | 52 |
regional part of forebrain | 6.19e-17 | 39 |
forebrain | 6.19e-17 | 39 |
future forebrain | 6.19e-17 | 39 |
brain | 7.09e-17 | 47 |
future brain | 7.09e-17 | 47 |
regional part of brain | 3.22e-16 | 46 |
brain grey matter | 4.41e-16 | 29 |
regional part of telencephalon | 4.41e-16 | 29 |
telencephalon | 4.41e-16 | 29 |
pre-chordal neural plate | 6.44e-16 | 49 |
ecto-epithelium | 7.12e-16 | 73 |
cerebral cortex | 4.02e-14 | 21 |
cerebral hemisphere | 4.02e-14 | 21 |
pallium | 4.02e-14 | 21 |
regional part of cerebral cortex | 6.12e-12 | 17 |
structure with developmental contribution from neural crest | 1.86e-08 | 92 |
occipital lobe | 6.12e-08 | 10 |
visual cortex | 6.12e-08 | 10 |
neocortex | 6.12e-08 | 10 |