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FFCP PHASE1:Mm9::chr8:30330049..30330095,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=210801
|EntrezGene=210801
|HGNC=
|HGNC=
|MCL_coexpression_id=950
|TSSclassifier=NA
|UniProt=Q8K1S2,A6H5Z5,C5IAW8,B7ZMT3,B7ZMT2
|UniProt=Q8K1S2,A6H5Z5,C5IAW8,B7ZMT3,B7ZMT2
|association_with_transcript=12bp_to_NM_153135,uc009liz.2,uc009lja.2,uc012gbu.1,uc012gbv.1,uc012gbw.1_5end
|association_with_transcript=12bp_to_NM_153135,uc009liz.2,uc009lja.2,uc012gbu.1,uc012gbv.1,uc012gbw.1_5end
|cluster_id=chr8:30330049..30330095,-
|description=CAGE_peak_1_at_Unc5d_5end
|description=CAGE_peak_1_at_Unc5d_5end
|id=chr8:30330049..30330095,-
|id=chr8:30330049..30330095,-
|ontology_enrichment_celltype=CL:0000117!5.39e-15!23;CL:0000337!5.39e-15!23;CL:0000540!9.35e-13!33;CL:0000047!9.35e-13!33;CL:0000031!9.35e-13!33;CL:0000404!9.35e-13!33;CL:0000221!9.68e-09!44;CL:0000133!9.68e-09!44;CL:0002319!1.79e-08!43;CL:0000393!1.81e-08!39;CL:0000211!1.81e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.34e-18,23;CL:0000337,4.34e-18,23;CL:0000540,3.01e-14,33;CL:0000047,3.01e-14,33;CL:0000031,3.01e-14,33;CL:0000404,3.01e-14,33;CL:0000393,2.38e-10,39;CL:0000211,2.38e-10,39;CL:0000221,9.61e-09,44;CL:0000133,9.61e-09,44;CL:0002319,1.97e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.10e-25!73;UBERON:0005743!1.10e-25!73;UBERON:0000073!3.49e-25!75;UBERON:0001016!3.49e-25!75;UBERON:0001049!8.59e-25!52;UBERON:0005068!8.59e-25!52;UBERON:0006241!8.59e-25!52;UBERON:0007135!8.59e-25!52;UBERON:0000955!2.55e-23!50;UBERON:0006238!2.55e-23!50;UBERON:0000033!4.51e-23!63;UBERON:0002616!8.41e-23!49;UBERON:0004121!5.28e-22!102;UBERON:0000924!5.28e-22!102;UBERON:0006601!5.28e-22!102;UBERON:0002346!5.76e-22!71;UBERON:0003075!5.76e-22!71;UBERON:0007284!5.76e-22!71;UBERON:0003056!6.11e-22!49;UBERON:0003080!1.45e-21!40;UBERON:0002780!7.89e-21!39;UBERON:0001890!7.89e-21!39;UBERON:0006240!7.89e-21!39;UBERON:0002020!3.45e-20!34;UBERON:0002791!5.23e-17!29;UBERON:0003528!5.23e-17!29;UBERON:0001893!5.23e-17!29;UBERON:0000956!1.43e-12!21;UBERON:0001869!1.43e-12!21;UBERON:0000203!1.43e-12!21;UBERON:0000153!2.53e-11!94;UBERON:0007811!5.79e-10!86;UBERON:0002619!8.62e-10!17;UBERON:0002021!1.18e-08!10;UBERON:0000411!1.18e-08!10;UBERON:0001950!1.18e-08!10;UBERON:0000025!7.55e-08!114;UBERON:0004111!6.37e-07!122;UBERON:0000468!8.01e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.97e-32,54;UBERON:0001049,3.01e-30,52;UBERON:0005068,3.01e-30,52;UBERON:0006241,3.01e-30,52;UBERON:0007135,3.01e-30,52;UBERON:0001017,1.17e-29,73;UBERON:0001016,3.45e-28,75;UBERON:0002346,9.19e-27,64;UBERON:0003075,9.19e-27,64;UBERON:0007284,9.19e-27,64;UBERON:0000955,3.69e-26,47;UBERON:0006238,3.69e-26,47;UBERON:0003080,1.16e-25,40;UBERON:0002616,1.57e-25,46;UBERON:0002780,9.25e-25,39;UBERON:0001890,9.25e-25,39;UBERON:0006240,9.25e-25,39;UBERON:0010371,2.02e-24,73;UBERON:0002020,6.03e-24,34;UBERON:0004121,1.93e-23,95;UBERON:0000924,1.93e-23,95;UBERON:0006601,1.93e-23,95;UBERON:0003056,2.67e-23,49;UBERON:0003528,4.86e-20,29;UBERON:0002791,4.86e-20,29;UBERON:0001893,4.86e-20,29;UBERON:0000956,1.38e-14,21;UBERON:0001869,1.38e-14,21;UBERON:0000203,1.38e-14,21;UBERON:0010314,1.07e-13,92;UBERON:0002619,3.44e-11,17;UBERON:0002021,2.73e-10,10;UBERON:0000411,2.73e-10,10;UBERON:0001950,2.73e-10,10;UBERON:0000025,6.36e-08,114;UBERON:0004111,3.01e-07,122
|phase1_expression=8.64803774365887,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0,0,0,0,22.4571271554154,21.6886301501533,27.2547503507657,0,0,0,0,0,0.299600110518405,0.384218305321555,43.1348787203267,30.3763361246304,32.6003690094642,15.996455126613,14.5773237028065,18.2511290830282,12.7474476454254,14.7075005857603,24.2254938198655,10.853423737241,11.5204899942183,11.3422207447967,10.7955419450843,9.37644067002168,11.725685958058,19.1339287410771,23.0725354142983,21.8025153250514,16.657486653495,18.2671456908795,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,4.92951969218382,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.913396434936424,0.461230994512117,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,3.80615036115011,4.1889341362691,0,0,0,0,31.6058249144176,11.8950156732843,13.5706700281894,25.3783507480724,34.010155824934,14.1295870300501,16.8730913590468,0.407357455401265,0.124406970610093,0.252722758433675,2.94618598241064,0.650602214813519,0.459804208866946,0.720248519221397,0.452114453507145,3.12967896096108,1.7935920839879,2.34254311399322,12.4177617954728,0.646703978798527,9.07709184805532,10.0292140773451,4.16471891612392,5.83899223373756,1.74126083261083,2.46938563689532,2.38841120182192,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.462801338662135,0,0.268273401399619,0,0,0,0,0,0,0,10.9350773253346,14.097931895962,0,0,1.70630600428187,2.78684006232526,1.54640953586512,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.597423819763102,0,0.571242563048644,2.25415471346161,0.407302655690628,0,0.210407459670956,0.379419222745544,0,0.156998727841375,0,0,0.500535317148282,0.982794975566015,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,1.84753190166605,1.89491411770485,3.25929952884052,1.69745085775188,2.11221223459652,2.34508760418542,1.6663054862021,1.36593553500459,1.10344600874334,0.8858587585951,1.43509291791738,1.14704320301017,0.690739927463582,0.289298117163023,0,0,0,1.10374698521893,11.3990918891332,11.1351102262593,0,0,1.57754109708128,0,0.430846795465598,0,0.445597348164788,0.283076530788832,4.45291771842384,1.75353514746787,2.37172666767914,8.9969968598106,0.283880170416537,0.890328018336276,0.81443479676788,0.164970122972535,0,4.12727081463468,5.13950046840077,1.69744571780308,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,2.49548164869305,0,0,0,1.70219802876894,3.6012218806262,3.23396709456886,12.2172109968008,9.57637261668277,6.95638388648075,6.74650984468696,5.48036908406279,0,0,0,0.16488625294148,1.13025098687134,0.482503399425247,0.238744688006273,0.492422699235184,0,8.15871328846243,0,0.412773735926445,0,0,0,0,0,0,0,0,0.474503990371703,1.42323626988794,0.648032044930808,0.836353184057875,0.218362563746178,1.21377911746339,0.41326727862668,0,0,0,1.12738587736838,0.747582730219894,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.5208175393758,2.83120229949419,0.724752362478018,1.44015003128933,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,38.9678771405776,33.6037422650239,36.6653128601214,36.0891682921744,41.7900337060092,31.7265436903674,27.675922509504,32.8734478353681,32.6262534468627,33.1366599521165,0.518936737920883,7.58147259461959,5.9756762013947,6.80698807791223,1.25767897576789,2.20612210140017,6.66740183404846,5.56294654545014,6.73930340142812,6.57012750585873,5.32306529769503,5.47016390019621,4.68207537349412,6.08238947846258,6.4902079919843,7.1444053692461,7.3007125345259,7.33055037762079,4.12085900803307,6.47675248591348,5.14303878578123,4.43689515398344,5.96090474868302,4.94177816549917,4.89368778159719,5.24610568928394,4.93905526756486,4.20911538300549,5.29636043998861,5.05028044491965,6.16902094245706,5.22073756590486,5.32000356120596,4.33823155320705,4.62975866354739,6.99469618226249,4.91256377735358,7.52048689169044,1.53030665655075,1.10295709559758,0.231867835620421
|phase1_expression=8.64803774365887,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0,0,0,0,22.4571271554154,21.6886301501533,27.2547503507657,0,0,0,0,0,0.299600110518405,0.384218305321555,43.1348787203267,30.3763361246304,32.6003690094642,15.996455126613,14.5773237028065,18.2511290830282,12.7474476454254,14.7075005857603,24.2254938198655,10.853423737241,11.5204899942183,11.3422207447967,10.7955419450843,9.37644067002168,11.725685958058,19.1339287410771,23.0725354142983,21.8025153250514,16.657486653495,18.2671456908795,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,4.92951969218382,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.913396434936424,0.461230994512117,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,3.80615036115011,4.1889341362691,0,0,0,0,31.6058249144176,11.8950156732843,13.5706700281894,25.3783507480724,34.010155824934,14.1295870300501,16.8730913590468,0.407357455401265,0.124406970610093,0.252722758433675,2.94618598241064,0.650602214813519,0.459804208866946,0.720248519221397,0.452114453507145,3.12967896096108,1.7935920839879,2.34254311399322,12.4177617954728,0.646703978798527,9.07709184805532,10.0292140773451,4.16471891612392,5.83899223373756,1.74126083261083,2.46938563689532,2.38841120182192,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.462801338662135,0,0.268273401399619,0,0,0,0,0,0,0,10.9350773253346,14.097931895962,0,0,1.70630600428187,2.78684006232526,1.54640953586512,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.597423819763102,0,0.571242563048644,2.25415471346161,0.407302655690628,0,0.210407459670956,0.379419222745544,0,0.156998727841375,0,0,0.500535317148282,0.982794975566015,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,1.84753190166605,1.89491411770485,3.25929952884052,1.69745085775188,2.11221223459652,2.34508760418542,1.6663054862021,1.36593553500459,1.10344600874334,0.8858587585951,1.43509291791738,1.14704320301017,0.690739927463582,0.289298117163023,0,0,0,1.10374698521893,11.3990918891332,11.1351102262593,0,0,1.57754109708128,0,0.430846795465598,0,0.445597348164788,0.283076530788832,4.45291771842384,1.75353514746787,2.37172666767914,8.9969968598106,0.283880170416537,0.890328018336276,0.81443479676788,0.164970122972535,0,4.12727081463468,5.13950046840077,1.69744571780308,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,2.49548164869305,0,0,0,1.70219802876894,3.6012218806262,3.23396709456886,12.2172109968008,9.57637261668277,6.95638388648075,6.74650984468696,5.48036908406279,0,0,0,0.16488625294148,1.13025098687134,0.482503399425247,0.238744688006273,0.492422699235184,0,8.15871328846243,0,0.412773735926445,0,0,0,0,0,0,0,0,0.474503990371703,1.42323626988794,0.648032044930808,0.836353184057875,0.218362563746178,1.21377911746339,0.41326727862668,0,0,0,1.12738587736838,0.747582730219894,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.5208175393758,2.83120229949419,0.724752362478018,1.44015003128933,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,38.9678771405776,33.6037422650239,36.6653128601214,36.0891682921744,41.7900337060092,31.7265436903674,27.675922509504,32.8734478353681,32.6262534468627,33.1366599521165,0.518936737920883,7.58147259461959,5.9756762013947,6.80698807791223,1.25767897576789,2.20612210140017,6.66740183404846,5.56294654545014,6.73930340142812,6.57012750585873,5.32306529769503,5.47016390019621,4.68207537349412,6.08238947846258,6.4902079919843,7.1444053692461,7.3007125345259,7.33055037762079,4.12085900803307,6.47675248591348,5.14303878578123,4.43689515398344,5.96090474868302,4.94177816549917,4.89368778159719,5.24610568928394,4.93905526756486,4.20911538300549,5.29636043998861,5.05028044491965,6.16902094245706,5.22073756590486,5.32000356120596,4.33823155320705,4.62975866354739,6.99469618226249,4.91256377735358,7.52048689169044,1.53030665655075,1.10295709559758,0.231867835620421
|short_description=p1@Unc5d
|short_description=p1@Unc5d
}}
}}

Latest revision as of 21:46, 1 October 2015

Short description:p1@Unc5d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Unc5d_5end
Coexpression cluster:MCL_coexpression_mm9:950
Association with transcript: 12bp_to_NM_153135, uc009liz.2, uc009lja.2, uc012gbu.1, uc012gbv.1, uc012gbw.1_5end
EntrezGene:Unc5d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Unc5d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C322.46
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.80
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A431.61
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F113.57
cortex, adult.CNhs10473.12-14D525.38
cortex, neonate N30.CNhs11107.1392-42F234.01
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E210.03
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G114.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A512.22
pituitary gland, embryo E15.CNhs10592.427-16B99.58
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D736.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.79
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.34e-1823
neuroblast (sensu Vertebrata)4.34e-1823
neuron3.01e-1433
neuronal stem cell3.01e-1433
neuroblast3.01e-1433
electrically signaling cell3.01e-1433
electrically responsive cell2.38e-1039
electrically active cell2.38e-1039
ectodermal cell9.61e-0944
neurectodermal cell9.61e-0944
neural cell1.97e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.97e-3254
neural tube3.01e-3052
neural rod3.01e-3052
future spinal cord3.01e-3052
neural keel3.01e-3052
central nervous system1.17e-2973
nervous system3.45e-2875
neurectoderm9.19e-2764
neural plate9.19e-2764
presumptive neural plate9.19e-2764
brain3.69e-2647
future brain3.69e-2647
anterior neural tube1.16e-2540
regional part of brain1.57e-2546
regional part of forebrain9.25e-2539
forebrain9.25e-2539
future forebrain9.25e-2539
ecto-epithelium2.02e-2473
gray matter6.03e-2434
ectoderm-derived structure1.93e-2395
ectoderm1.93e-2395
presumptive ectoderm1.93e-2395
pre-chordal neural plate2.67e-2349
brain grey matter4.86e-2029
regional part of telencephalon4.86e-2029
telencephalon4.86e-2029
cerebral cortex1.38e-1421
cerebral hemisphere1.38e-1421
pallium1.38e-1421
structure with developmental contribution from neural crest1.07e-1392
regional part of cerebral cortex3.44e-1117
occipital lobe2.73e-1010
visual cortex2.73e-1010
neocortex2.73e-1010
tube6.36e-08114
anatomical conduit3.01e-07122
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