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FFCP PHASE1:Mm9::chr6:138371385..138371415,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109593
|EntrezGene=109593
|HGNC=
|HGNC=
|MCL_coexpression_id=3549
|TSSclassifier=NA
|UniProt=Q8BZL8
|UniProt=Q8BZL8
|association_with_transcript=0bp_to_uc009enl.1_5end
|association_with_transcript=0bp_to_uc009enl.1_5end
|cluster_id=chr6:138371385..138371415,-
|description=CAGE_peak_1_at_Lmo3_5end
|description=CAGE_peak_1_at_Lmo3_5end
|id=chr6:138371385..138371415,-
|id=chr6:138371385..138371415,-
|ontology_enrichment_celltype=CL:0000540!3.21e-15!33;CL:0000047!3.21e-15!33;CL:0000031!3.21e-15!33;CL:0000404!3.21e-15!33;CL:0000117!1.86e-14!23;CL:0000337!1.86e-14!23;CL:0000221!1.14e-10!44;CL:0000133!1.14e-10!44;CL:0002319!2.07e-10!43;CL:0000393!2.08e-10!39;CL:0000211!2.08e-10!39;CL:0000055!7.04e-07!50
|ontology_enrichment_celltype=CL:0000540!3.21e-15!33;CL:0000047!3.21e-15!33;CL:0000031!3.21e-15!33;CL:0000404!3.21e-15!33;CL:0000117!1.86e-14!23;CL:0000337!1.86e-14!23;CL:0000221!1.14e-10!44;CL:0000133!1.14e-10!44;CL:0002319!2.07e-10!43;CL:0000393!2.08e-10!39;CL:0000211!2.08e-10!39;CL:0000055!7.04e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-18,23;CL:0000337,1.14e-18,23;CL:0000540,1.18e-17,33;CL:0000047,1.18e-17,33;CL:0000031,1.18e-17,33;CL:0000404,1.18e-17,33;CL:0000393,3.06e-13,39;CL:0000211,3.06e-13,39;CL:0000221,2.28e-11,44;CL:0000133,2.28e-11,44;CL:0002319,4.89e-11,43;CL:0002609,6.15e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.05e-25!73;UBERON:0005743!2.05e-25!73;UBERON:0000073!7.95e-24!75;UBERON:0001016!7.95e-24!75;UBERON:0001049!4.16e-21!52;UBERON:0005068!4.16e-21!52;UBERON:0006241!4.16e-21!52;UBERON:0007135!4.16e-21!52;UBERON:0002020!2.34e-20!34;UBERON:0000955!7.60e-20!50;UBERON:0006238!7.60e-20!50;UBERON:0002346!1.89e-19!71;UBERON:0003075!1.89e-19!71;UBERON:0007284!1.89e-19!71;UBERON:0003080!3.33e-19!40;UBERON:0002616!3.59e-19!49;UBERON:0004121!8.97e-19!102;UBERON:0000924!8.97e-19!102;UBERON:0006601!8.97e-19!102;UBERON:0002780!1.25e-18!39;UBERON:0001890!1.25e-18!39;UBERON:0006240!1.25e-18!39;UBERON:0000033!7.40e-18!63;UBERON:0003056!8.93e-18!49;UBERON:0002791!2.29e-17!29;UBERON:0003528!2.29e-17!29;UBERON:0001893!2.29e-17!29;UBERON:0000956!1.18e-12!21;UBERON:0001869!1.18e-12!21;UBERON:0000203!1.18e-12!21;UBERON:0002619!5.15e-10!17;UBERON:0007811!1.82e-08!86;UBERON:0000153!4.80e-08!94;UBERON:0002021!8.69e-08!10;UBERON:0000411!8.69e-08!10;UBERON:0001950!8.69e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-26,73;UBERON:0002020,5.15e-26,34;UBERON:0001016,5.70e-25,75;UBERON:0000073,1.92e-24,54;UBERON:0001049,5.26e-23,52;UBERON:0005068,5.26e-23,52;UBERON:0006241,5.26e-23,52;UBERON:0007135,5.26e-23,52;UBERON:0003528,4.79e-22,29;UBERON:0002791,4.79e-22,29;UBERON:0001893,4.79e-22,29;UBERON:0003080,3.11e-21,40;UBERON:0002780,1.71e-20,39;UBERON:0001890,1.71e-20,39;UBERON:0006240,1.71e-20,39;UBERON:0000955,1.46e-19,47;UBERON:0006238,1.46e-19,47;UBERON:0002346,3.72e-19,64;UBERON:0003075,3.72e-19,64;UBERON:0007284,3.72e-19,64;UBERON:0002616,9.85e-19,46;UBERON:0004121,7.68e-17,95;UBERON:0000924,7.68e-17,95;UBERON:0006601,7.68e-17,95;UBERON:0010371,3.07e-16,73;UBERON:0000956,8.45e-16,21;UBERON:0001869,8.45e-16,21;UBERON:0000203,8.45e-16,21;UBERON:0003056,1.19e-15,49;UBERON:0002619,2.59e-12,17;UBERON:0002021,7.96e-10,10;UBERON:0000411,7.96e-10,10;UBERON:0001950,7.96e-10,10;UBERON:0010314,1.40e-09,92;UBERON:0002420,2.18e-07,8;UBERON:0007245,2.18e-07,8;UBERON:0010009,2.18e-07,8;UBERON:0010011,2.18e-07,8;UBERON:0000454,2.18e-07,8
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,20.0293296251002,28.5655128806898,16.4796164911607,0,0,0,0,0,0,0.768436610643109,23.9523004432583,24.9760985913628,21.6634710191923,14.8538511889978,18.5529574399355,48.6288472883368,48.9770356903188,56.0723459832113,5.50579404996943,10.3426743849002,9.06278546211836,21.4974649000216,22.5974479697952,25.5247551572812,5.58365998002762,8.4414391504752,8.25110537994775,14.7314292736834,17.7964600998879,13.4207600994216,0,0,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,4.22530259330042,0,0,0,0,0,0,2.05530983494308,0,0.148442139064825,0.867426633830679,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0,0.255457055208591,0,0,0,11.5338792341713,48.4950638987744,105.424001422693,47.9755123730683,31.1972857943003,11.4283424507758,41.0470395561427,0.611036183101898,0,0,0.210441855886474,0.260240885925407,0,0.360124259610698,0.753524089178575,0.408218994907967,1.15302348256365,0.749613796477831,0.517406741478031,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,60.9840850835969,67.9170441703277,0,0.528901133327089,0.639864751605702,2.09013004674395,8.89185483122444,9.68080918192044,8.00560957841533,7.03834816616469,0,2.79988223030818,1.75934646160189,2.98434708061726,1.75467678407208,4.49409704327111,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.70542270593436,1.14075483509418,0.509235257325564,0,0.167506257441816,0,0,0,0.664394068946325,0,0,0,0.144649058581512,0,0,0,0,3.69266356971921,3.6335622843583,0,0,4.73262329124385,2.73307121007647,4.95473814785438,0.238968797952552,0.445597348164788,0.283076530788832,2.02405350837447,4.67609372658099,7.11518000303742,23.4564560987919,0,0.534196811001766,0.977321756121456,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,1.26042765821917,2.58717367565509,1.28602221018955,0.354680467284547,0.535106452806212,0.822745103010605,0.304464949114599,0,0,1.98475558249466,0,0.322928853391811,0.0603129249281559,0.358117032009409,0.328281799490123,2.33184669303881,5.93360966433631,0,0,0,0,0,0,0,0,0,0.954670618015114,2.37251995185852,1.21991680276109,1.94409613479242,1.04544148007234,1.31017538247707,0.539457385539283,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,92.2892671425069,31.0613513439387,30.3814656094737,26.9260891316516,22.3409137046794,23.9778881919725,21.9064230243013,19.5756525067224,22.0657389579868,27.6416869480365,13.9795284172991,1.14166082342594,4.78829848081237,3.75613932659095,7.29320151204882,9.85181864351517,8.64064489715066,8.44537565646138,6.79915688888351,8.98573786857083,8.59170519996911,7.60437899670719,9.05406438653166,7.95952813494,6.85069130732101,7.3517400263185,4.76293691283074,5.2147946675185,6.17309505483856,4.53294490883637,6.18235464564469,7.20025430009372,5.50174999093946,5.96090474868302,7.1219744149841,6.49354724865781,6.26148098398406,7.13419094203813,7.10288220882176,5.83957689537206,6.73370725989286,7.47400614182297,7.19082721341613,6.54769669071503,6.19747364743864,5.01557188550968,16.4874981439044,7.25187986180766,7.52048689169044,0.765153328275374,0.220591419119515,0.463735671240843
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,20.0293296251002,28.5655128806898,16.4796164911607,0,0,0,0,0,0,0.768436610643109,23.9523004432583,24.9760985913628,21.6634710191923,14.8538511889978,18.5529574399355,48.6288472883368,48.9770356903188,56.0723459832113,5.50579404996943,10.3426743849002,9.06278546211836,21.4974649000216,22.5974479697952,25.5247551572812,5.58365998002762,8.4414391504752,8.25110537994775,14.7314292736834,17.7964600998879,13.4207600994216,0,0,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,4.22530259330042,0,0,0,0,0,0,2.05530983494308,0,0.148442139064825,0.867426633830679,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0,0.255457055208591,0,0,0,11.5338792341713,48.4950638987744,105.424001422693,47.9755123730683,31.1972857943003,11.4283424507758,41.0470395561427,0.611036183101898,0,0,0.210441855886474,0.260240885925407,0,0.360124259610698,0.753524089178575,0.408218994907967,1.15302348256365,0.749613796477831,0.517406741478031,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,60.9840850835969,67.9170441703277,0,0.528901133327089,0.639864751605702,2.09013004674395,8.89185483122444,9.68080918192044,8.00560957841533,7.03834816616469,0,2.79988223030818,1.75934646160189,2.98434708061726,1.75467678407208,4.49409704327111,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.70542270593436,1.14075483509418,0.509235257325564,0,0.167506257441816,0,0,0,0.664394068946325,0,0,0,0.144649058581512,0,0,0,0,3.69266356971921,3.6335622843583,0,0,4.73262329124385,2.73307121007647,4.95473814785438,0.238968797952552,0.445597348164788,0.283076530788832,2.02405350837447,4.67609372658099,7.11518000303742,23.4564560987919,0,0.534196811001766,0.977321756121456,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,1.26042765821917,2.58717367565509,1.28602221018955,0.354680467284547,0.535106452806212,0.822745103010605,0.304464949114599,0,0,1.98475558249466,0,0.322928853391811,0.0603129249281559,0.358117032009409,0.328281799490123,2.33184669303881,5.93360966433631,0,0,0,0,0,0,0,0,0,0.954670618015114,2.37251995185852,1.21991680276109,1.94409613479242,1.04544148007234,1.31017538247707,0.539457385539283,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,92.2892671425069,31.0613513439387,30.3814656094737,26.9260891316516,22.3409137046794,23.9778881919725,21.9064230243013,19.5756525067224,22.0657389579868,27.6416869480365,13.9795284172991,1.14166082342594,4.78829848081237,3.75613932659095,7.29320151204882,9.85181864351517,8.64064489715066,8.44537565646138,6.79915688888351,8.98573786857083,8.59170519996911,7.60437899670719,9.05406438653166,7.95952813494,6.85069130732101,7.3517400263185,4.76293691283074,5.2147946675185,6.17309505483856,4.53294490883637,6.18235464564469,7.20025430009372,5.50174999093946,5.96090474868302,7.1219744149841,6.49354724865781,6.26148098398406,7.13419094203813,7.10288220882176,5.83957689537206,6.73370725989286,7.47400614182297,7.19082721341613,6.54769669071503,6.19747364743864,5.01557188550968,16.4874981439044,7.25187986180766,7.52048689169044,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p1@Lmo3
|short_description=p1@Lmo3
}}
}}

Latest revision as of 20:58, 26 September 2015

Short description:p1@Lmo3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lmo3_5end
Coexpression cluster:MCL_coexpression_mm9:3549
Association with transcript: 0bp_to_uc009enl.1_5end
EntrezGene:Lmo3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lmo3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C320.03
Mouse Granule cells, donor2.CNhs12357.11731-123E328.57
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D248.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D656.07
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D848.50
corpus striatum, neonate N00.CNhs11226.630-43F1105.42
cortex, adult.CNhs10473.12-14D547.98
cortex, neonate N30.CNhs11107.1392-42F231.20
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B241.05
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E860.98
hippocampus, neonate N00.CNhs11228.627-43G167.92
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D88.89
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F892.29
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B19.85
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I516.49
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.13e-2673
gray matter5.15e-2634
nervous system5.70e-2575
regional part of nervous system1.92e-2454
neural tube5.26e-2352
neural rod5.26e-2352
future spinal cord5.26e-2352
neural keel5.26e-2352
brain grey matter4.79e-2229
regional part of telencephalon4.79e-2229
telencephalon4.79e-2229
anterior neural tube3.11e-2140
regional part of forebrain1.71e-2039
forebrain1.71e-2039
future forebrain1.71e-2039
brain1.46e-1947
future brain1.46e-1947
neurectoderm3.72e-1964
neural plate3.72e-1964
presumptive neural plate3.72e-1964
regional part of brain9.85e-1946
ectoderm-derived structure7.68e-1795
ectoderm7.68e-1795
presumptive ectoderm7.68e-1795
ecto-epithelium3.07e-1673
cerebral cortex8.45e-1621
cerebral hemisphere8.45e-1621
pallium8.45e-1621
pre-chordal neural plate1.19e-1549
regional part of cerebral cortex2.59e-1217
occipital lobe7.96e-1010
visual cortex7.96e-1010
neocortex7.96e-1010
structure with developmental contribution from neural crest1.40e-0992
basal ganglion2.18e-078
nuclear complex of neuraxis2.18e-078
aggregate regional part of brain2.18e-078
collection of basal ganglia2.18e-078
cerebral subcortex2.18e-078
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