Personal tools

CL:0002396: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0002396 |name=CD14-low, CD16-positive monocyte |namespace=cell |def="A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168] |xref...")
 
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 2: Line 2:
|id=CL:0002396
|id=CL:0002396
|name=CD14-low, CD16-positive monocyte
|name=CD14-low, CD16-positive monocyte
|namespace=cell
|namespace=cell;;efo
|def="A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168]
|def="A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168]
|xref=
|xref=
Line 14: Line 14:
|obo_creation_date=2010-10-04T12:25:42Z
|obo_creation_date=2010-10-04T12:25:42Z
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=CL:0002397
|develops_from=CL:0002397
Line 20: Line 19:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|preceded_by=
}}
}}

Latest revision as of 13:03, 27 June 2012

Name:CD14-low, CD16-positive monocyte
Namespace:cell;;efo
Definition:"A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168]
Comments:Markers are associated with human monocytes.
Created by:tmeehan
Creation date:2010-10-04T12:25:42Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000875(non-classical monocyte)
develops_from:CL:0002397(CD14-positive, CD16-positive monocyte)



Children


NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002396 (CD14-low, CD16-positive monocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.27e-147FFCP PHASE1:Hg19::chr8:144480343..144480350,-#_8052815ad99a07e1908f3c944eae9f31p@chr8:144480343..144480350, -
3.27e-147FFCP PHASE2:Hg19::chr8:144480343..144480350,-#_8052815ad99a07e1908f3c944eae9f31p@chr8:144480343..144480350, -
1.47e-146FFCP PHASE1:Hg19::chr15:22550731..22550738,+#_3aafee2d74977a21620e140b924109fcp@chr15:22550731..22550738, +
1.47e-146FFCP PHASE2:Hg19::chr15:22550731..22550738,+#_3aafee2d74977a21620e140b924109fcp@chr15:22550731..22550738, +
2.33e-118FFCP PHASE1:Hg19::chr15:22538560..22538601,-#_fc9271cfd97bf2ddeac0547c9becc276p@chr15:22538560..22538601, -
2.33e-118FFCP PHASE1:Hg19::chr10:43609342..43609351,+#_fc9271cfd97bf2ddeac0547c9becc276p@chr10:43609342..43609351, +
2.33e-118FFCP PHASE2:Hg19::chr10:43609342..43609351,+#_fc9271cfd97bf2ddeac0547c9becc276p@chr10:43609342..43609351, +
2.33e-118FFCP PHASE2:Hg19::chr15:22538560..22538601,-#_fc9271cfd97bf2ddeac0547c9becc276p@chr15:22538560..22538601, -
7.78e-118FFCP PHASE2:Hg19::chr15:22550782..22550787,+#_c81b96a7a921a0c6243e4042f81ef888p@chr15:22550782..22550787, +
7.78e-118FFCP PHASE1:Hg19::chr15:22550782..22550787,+#_c81b96a7a921a0c6243e4042f81ef888p@chr15:22550782..22550787, +
1.16e-117FFCP PHASE1:Hg19::chr7:101923267..101923278,+#_41b02b24406b1252c5e6520e60008591p@chr7:101923267..101923278, +
1.16e-117FFCP PHASE2:Hg19::chr7:101923267..101923278,+#_41b02b24406b1252c5e6520e60008591p@chr7:101923267..101923278, +
4.06e-99FFCP PHASE2:Hg19::chr1:161519682..161519691,-#_c3f2eb9c8afa79ef2444df2e00474102p7@FCGR3A
4.06e-99FFCP PHASE1:Hg19::chr10:115070193..115070207,-#_c3f2eb9c8afa79ef2444df2e00474102p@chr10:115070193..115070207, -
4.06e-99FFCP PHASE2:Hg19::chr10:115070193..115070207,-#_c3f2eb9c8afa79ef2444df2e00474102p@chr10:115070193..115070207, -
4.06e-99FFCP PHASE1:Hg19::chr1:161519682..161519691,-#_c3f2eb9c8afa79ef2444df2e00474102p7@FCGR3A
2.17e-98FFCP PHASE1:Hg19::chr15:22550810..22550816,+#_2e63b034ac81e859b12397953db00e35p@chr15:22550810..22550816, +
2.17e-98FFCP PHASE2:Hg19::chr15:22550810..22550816,+#_2e63b034ac81e859b12397953db00e35p@chr15:22550810..22550816, +
3.03e-98FFCP PHASE1:Hg19::chr17:40351201..40351230,+#_e2b312ed5e23a9775ee1d50922eb9082p@chr17:40351201..40351230, +
3.03e-98FFCP PHASE2:Hg19::chr17:40351201..40351230,+#_e2b312ed5e23a9775ee1d50922eb9082p@chr17:40351201..40351230, +
3.03e-98FFCP PHASE1:Hg19::chr10:134234820..134234825,+#_e2b312ed5e23a9775ee1d50922eb9082p@chr10:134234820..134234825, +
3.03e-98FFCP PHASE2:Hg19::chr10:134234820..134234825,+#_e2b312ed5e23a9775ee1d50922eb9082p@chr10:134234820..134234825, +
2.28e-85FFCP PHASE2:Hg19::chr12:29727591..29727616,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr12:29727591..29727616, -
2.28e-85FFCP PHASE1:Hg19::chr7:20581331..20581339,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr7:20581331..20581339, -
2.28e-85FFCP PHASE2:Hg19::chr7:20581331..20581339,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr7:20581331..20581339, -
2.28e-85FFCP PHASE1:Hg19::chr15:22550722..22550726,+#_a65b47928bf2ca75f034c6aeca89fdb0p@chr15:22550722..22550726, +
2.28e-85FFCP PHASE2:Hg19::chr17:47287786..47287800,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr17:47287786..47287800, -
2.28e-85FFCP PHASE1:Hg19::chr7:20581377..20581387,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr7:20581377..20581387, -
2.28e-85FFCP PHASE2:Hg19::chr7:20581377..20581387,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr7:20581377..20581387, -
2.28e-85FFCP PHASE2:Hg19::chr15:22550722..22550726,+#_a65b47928bf2ca75f034c6aeca89fdb0p@chr15:22550722..22550726, +
2.28e-85FFCP PHASE1:Hg19::chr7:155055063..155055078,+#_a65b47928bf2ca75f034c6aeca89fdb0p@chr7:155055063..155055078, +
2.28e-85FFCP PHASE2:Hg19::chr7:155055063..155055078,+#_a65b47928bf2ca75f034c6aeca89fdb0p@chr7:155055063..155055078, +
2.28e-85FFCP PHASE1:Hg19::chr12:29727591..29727616,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr12:29727591..29727616, -
2.28e-85FFCP PHASE1:Hg19::chr17:47287786..47287800,-#_a65b47928bf2ca75f034c6aeca89fdb0p@chr17:47287786..47287800, -
3.04e-85FFCP PHASE2:Hg19::chr16:1538765..1538796,-#_1567fa0c880163a614cad6b9d7740851p1@PTX4
3.04e-85FFCP PHASE1:Hg19::chr16:1538765..1538796,-#_1567fa0c880163a614cad6b9d7740851p1@PTX4
4.06e-85FFCP PHASE2:Hg19::chr15:75080883..75080890,+#_6e96df36ac0d158112c12e2ccc12a741p14@CSK
4.06e-85FFCP PHASE1:Hg19::chr15:75080883..75080890,+#_6e96df36ac0d158112c12e2ccc12a741p14@CSK
7.21e-85FFCP PHASE1:Hg19::chr4:2794535..2794549,-#_eb96e375d91520dbe003fe4035e08eadp@chr4:2794535..2794549, -
7.21e-85FFCP PHASE2:Hg19::chr4:2794535..2794549,-#_eb96e375d91520dbe003fe4035e08eadp@chr4:2794535..2794549, -
6.07e-75FFCP PHASE1:Hg19::chr9:137267629..137267639,-#_93cc63d43a49312b444d84afc133d316p@chr9:137267629..137267639, -
6.07e-75FFCP PHASE2:Hg19::chr9:137267629..137267639,-#_93cc63d43a49312b444d84afc133d316p@chr9:137267629..137267639, -
7.81e-75FFCP PHASE1:Hg19::chr6:31584663..31584673,-#_3517069eff5d56d324142db25b305188p@chr6:31584663..31584673, -
7.81e-75FFCP PHASE2:Hg19::chr6:31584663..31584673,-#_3517069eff5d56d324142db25b305188p@chr6:31584663..31584673, -
5.01e-67FFCP PHASE2:Hg19::chr20:825297..825306,+#_cafff6d76dd727dfa50d114ca1cbbcbbp7@FAM110A
5.01e-67FFCP PHASE2:Hg19::chr16:4563100..4563144,-#_cafff6d76dd727dfa50d114ca1cbbcbbp12@C16orf5
5.01e-67FFCP PHASE1:Hg19::chr6:144952186..144952227,+#_cafff6d76dd727dfa50d114ca1cbbcbbp@chr6:144952186..144952227, +
5.01e-67FFCP PHASE1:Hg19::chr16:4563100..4563144,-#_cafff6d76dd727dfa50d114ca1cbbcbbp12@C16orf5
5.01e-67FFCP PHASE2:Hg19::chr2:29337114..29337117,+#_cafff6d76dd727dfa50d114ca1cbbcbbp21@CLIP4
5.01e-67FFCP PHASE1:Hg19::chr3:101597149..101597179,+#_cafff6d76dd727dfa50d114ca1cbbcbbp@chr3:101597149..101597179, +
5.01e-67FFCP PHASE1:Hg19::chr20:825297..825306,+#_cafff6d76dd727dfa50d114ca1cbbcbbp7@FAM110A
5.01e-67FFCP PHASE1:Hg19::chr10:114594528..114594539,-#_cafff6d76dd727dfa50d114ca1cbbcbbp@chr10:114594528..114594539, -
5.01e-67FFCP PHASE2:Hg19::chr10:114594528..114594539,-#_cafff6d76dd727dfa50d114ca1cbbcbbp@chr10:114594528..114594539, -
5.01e-67FFCP PHASE2:Hg19::chr6:144952186..144952227,+#_cafff6d76dd727dfa50d114ca1cbbcbbp@chr6:144952186..144952227, +
5.01e-67FFCP PHASE1:Hg19::chr2:29337114..29337117,+#_cafff6d76dd727dfa50d114ca1cbbcbbp21@CLIP4
5.01e-67FFCP PHASE2:Hg19::chr3:101597149..101597179,+#_cafff6d76dd727dfa50d114ca1cbbcbbp@chr3:101597149..101597179, +
6.27e-67FFCP PHASE1:Hg19::chr2:241906877..241906887,-#_15db1a33da06457c26a80efcb5740534p3@LOC200772
6.27e-67FFCP PHASE1:Hg19::chr11:67415202..67415246,-#_15db1a33da06457c26a80efcb5740534p5@ACY3
6.27e-67FFCP PHASE2:Hg19::chr11:67415202..67415246,-#_15db1a33da06457c26a80efcb5740534p5@ACY3
6.27e-67FFCP PHASE2:Hg19::chr2:241906877..241906887,-#_15db1a33da06457c26a80efcb5740534p3@LOC200772
6.27e-67FFCP PHASE1:Hg19::chr10:115080077..115080087,-#_15db1a33da06457c26a80efcb5740534p@chr10:115080077..115080087, -
6.27e-67FFCP PHASE2:Hg19::chr10:115080077..115080087,-#_15db1a33da06457c26a80efcb5740534p@chr10:115080077..115080087, -
9.82e-67FFCP PHASE1:Hg19::chr2:2685878..2685892,+#_30d7005f012ecd9637a082c983326abdp@chr2:2685878..2685892, +
9.82e-67FFCP PHASE2:Hg19::chr20:827656..827661,-#_30d7005f012ecd9637a082c983326abdp@chr20:827656..827661, -
9.82e-67FFCP PHASE1:Hg19::chr19:50285177..50285181,+#_30d7005f012ecd9637a082c983326abdp@chr19:50285177..50285181, +
9.82e-67FFCP PHASE2:Hg19::chr2:2685878..2685892,+#_30d7005f012ecd9637a082c983326abdp@chr2:2685878..2685892, +
9.82e-67FFCP PHASE1:Hg19::chr20:827656..827661,-#_30d7005f012ecd9637a082c983326abdp@chr20:827656..827661, -
9.82e-67FFCP PHASE2:Hg19::chr19:50285177..50285181,+#_30d7005f012ecd9637a082c983326abdp@chr19:50285177..50285181, +
2.39e-66FFCP PHASE2:Hg19::chr5:172232848..172232850,-#_b3a92d2bbfd5d0163c9c9484b390fe5ap@chr5:172232848..172232850, -
2.39e-66FFCP PHASE1:Hg19::chr5:172232848..172232850,-#_b3a92d2bbfd5d0163c9c9484b390fe5ap@chr5:172232848..172232850, -
3.76e-66FFCP PHASE2:Hg19::chr2:121011117..121011127,+#_678c76c256bafd6099dd933a1b5209cbp16@RALB
3.76e-66FFCP PHASE1:Hg19::chr17:4689735..4689745,-#_678c76c256bafd6099dd933a1b5209cbp2@VMO1
3.76e-66FFCP PHASE1:Hg19::chr8:56800914..56800925,+#_678c76c256bafd6099dd933a1b5209cbp@chr8:56800914..56800925, +
3.76e-66FFCP PHASE2:Hg19::chr8:56800914..56800925,+#_678c76c256bafd6099dd933a1b5209cbp@chr8:56800914..56800925, +
3.76e-66FFCP PHASE1:Hg19::chr2:121011117..121011127,+#_678c76c256bafd6099dd933a1b5209cbp16@RALB
3.76e-66FFCP PHASE2:Hg19::chr17:4689735..4689745,-#_678c76c256bafd6099dd933a1b5209cbp2@VMO1
4.68e-66FFCP PHASE2:Hg19::chr2:241906961..241906992,+#_0cffe6e0660757ce0c276235990e3ba0p@chr2:241906961..241906992, +
4.68e-66FFCP PHASE1:Hg19::chr2:241906961..241906992,+#_0cffe6e0660757ce0c276235990e3ba0p@chr2:241906961..241906992, +
1.33e-60FFCP PHASE1:Hg19::chr14:23282256..23282282,-#_376672dd648a094c83e0995e82daa7fdp17@SLC7A7
1.33e-60FFCP PHASE2:Hg19::chr16:1538881..1538887,+#_376672dd648a094c83e0995e82daa7fdp@chr16:1538881..1538887, +
1.33e-60FFCP PHASE2:Hg19::chr14:23282256..23282282,-#_376672dd648a094c83e0995e82daa7fdp17@SLC7A7
1.33e-60FFCP PHASE1:Hg19::chr16:1538881..1538887,+#_376672dd648a094c83e0995e82daa7fdp@chr16:1538881..1538887, +
1.62e-60FFCP PHASE2:Hg19::chr5:56136714..56136717,+#_043d8d2bea6c4881d969ada7d5d360fbp@chr5:56136714..56136717, +
1.62e-60FFCP PHASE1:Hg19::chr5:56136714..56136717,+#_043d8d2bea6c4881d969ada7d5d360fbp@chr5:56136714..56136717, +
2.43e-60FFCP PHASE2:Hg19::chr3:50658125..50658131,+#_debeb95d11f10215d0b0e6a76b6b5ca2p@chr3:50658125..50658131, +
2.43e-60FFCP PHASE1:Hg19::chr3:50654306..50654308,-#_debeb95d11f10215d0b0e6a76b6b5ca2p@chr3:50654306..50654308, -
2.43e-60FFCP PHASE2:Hg19::chr6:144980558..144980569,+#_debeb95d11f10215d0b0e6a76b6b5ca2p30@UTRN
2.43e-60FFCP PHASE1:Hg19::chr3:50658125..50658131,+#_debeb95d11f10215d0b0e6a76b6b5ca2p@chr3:50658125..50658131, +
2.43e-60FFCP PHASE2:Hg19::chr3:50654306..50654308,-#_debeb95d11f10215d0b0e6a76b6b5ca2p@chr3:50654306..50654308, -
2.43e-60FFCP PHASE1:Hg19::chr6:144980558..144980569,+#_debeb95d11f10215d0b0e6a76b6b5ca2p30@UTRN
1.22e-59FFCP PHASE1:Hg19::chr7:2797828..2797848,-#_1373b46de775c760539da5f5a70cfa99p@chr7:2797828..2797848, -
1.22e-59FFCP PHASE2:Hg19::chr7:2797828..2797848,-#_1373b46de775c760539da5f5a70cfa99p@chr7:2797828..2797848, -
2.4e-55FFCP PHASE1:Hg19::chr19:14546214..14546245,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600p@chr19:14546214..14546245, +
2.4e-55FFCP PHASE2:Hg19::chr17:531709..531723,-#_4a5bb824cf8aea7ff0ed61d4ad0f8600p@chr17:531709..531723, -
2.4e-55FFCP PHASE1:Hg19::chr8:142384243..142384251,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600p@chr8:142384243..142384251, +
2.4e-55FFCP PHASE2:Hg19::chr8:142384243..142384251,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600p@chr8:142384243..142384251, +
2.4e-55FFCP PHASE2:Hg19::chr19:14546214..14546245,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600p@chr19:14546214..14546245, +
2.4e-55FFCP PHASE1:Hg19::chr17:531709..531723,-#_4a5bb824cf8aea7ff0ed61d4ad0f8600p@chr17:531709..531723, -
2.88e-55FFCP PHASE1:Hg19::chr2:86225195..86225216,-#_1ed052d09ed5781ee69e9cfcacf917b4p@chr2:86225195..86225216, -
2.88e-55FFCP PHASE2:Hg19::chr2:86225195..86225216,-#_1ed052d09ed5781ee69e9cfcacf917b4p@chr2:86225195..86225216, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002396&oldid=1837125"