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{{CL
{{CL
|id=CL:0002374
|alt_id=
|name=ear hair cell
|namespace=cell
|def="A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
|xref=
|is_a=CL:0000855
|synonym="ear receptor cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-24T01:49:31Z
|def="A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002374
|is_a=CL:0000855
|is_obsolete=
|located_in=
|located_in=
|name=ear hair cell
|namespace=FANTOM
|obo_creation_date=2010-09-24T01:49:31Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym="ear receptor cell" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:42, 12 September 2014

Name:ear hair cell
Namespace:FANTOM
Definition:"A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
Synonyms: "ear receptor cell" EXACT []
Created by:tmeehan
Creation date:2010-09-24T01:49:31Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000855(sensory hair cell)



Children


is a:CL:0000202 (auditory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002374 (ear hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
2.74e-44FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_ca819317444dcb86559790a95de50e7bp@chr2:170417150..170417155, -
2.74e-44FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_ca819317444dcb86559790a95de50e7bp@chr18:81314626..81314636, +
2.74e-44FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_ca819317444dcb86559790a95de50e7bp@chr15:89215306..89215315, +
2.74e-44FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983160..13983167, +
2.74e-44FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_ca819317444dcb86559790a95de50e7bp@chr13:78257491..78257498, +
2.74e-44FFCP PHASE2:Mm9::chr17:66272852..66272855,-#_ca819317444dcb86559790a95de50e7bp@chr17:66272852..66272855, -
2.74e-44FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_ca819317444dcb86559790a95de50e7bp@chr5:150945209..150945220, +
2.74e-44FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_ca819317444dcb86559790a95de50e7bp@chrX:154140781..154140788, +
2.74e-44FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_ca819317444dcb86559790a95de50e7bp@chr1:182528388..182528403, +
2.74e-44FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_ca819317444dcb86559790a95de50e7bp@chr3:154459246..154459253, +
2.74e-44FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_ca819317444dcb86559790a95de50e7bp2@Tmprss3
2.74e-44FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_ca819317444dcb86559790a95de50e7bp@chr16:93971357..93971363, -
2.74e-44FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_ca819317444dcb86559790a95de50e7bp1@Tmc1
2.74e-44FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_ca819317444dcb86559790a95de50e7bp3@Ptprq
2.74e-44FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983160..13983167, +
2.74e-44FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_ca819317444dcb86559790a95de50e7bp1@Tmprss7
2.74e-44FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_ca819317444dcb86559790a95de50e7bp@chr13:43699228..43699239, +
2.74e-44FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_ca819317444dcb86559790a95de50e7bp@chr9:66860888..66860899, +
2.74e-44FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_ca819317444dcb86559790a95de50e7bp2@Plscr5
2.74e-44FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_ca819317444dcb86559790a95de50e7bp2@Gm1322
2.74e-44FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_ca819317444dcb86559790a95de50e7bp@chr11:114603036..114603048, +
2.74e-44FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_ca819317444dcb86559790a95de50e7bp@chr6:113251614..113251623, +
2.74e-44FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_ca819317444dcb86559790a95de50e7bp@chr8:13414266..13414279, +
2.74e-44FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_ca819317444dcb86559790a95de50e7bp@chr14:31283085..31283097, -
2.74e-44FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_ca819317444dcb86559790a95de50e7bp@chr15:65641779..65641790, +
2.74e-44FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_ca819317444dcb86559790a95de50e7bp@chr15:12848147..12848162, +
2.74e-44FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_ca819317444dcb86559790a95de50e7bp4@Chrna10
2.74e-44FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_ca819317444dcb86559790a95de50e7bp@chr4:130461150..130461185, +
2.74e-44FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_ca819317444dcb86559790a95de50e7bp@chr2:75320183..75320189, +
2.74e-44FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_ca819317444dcb86559790a95de50e7bp@chr2:128881546..128881553, -
2.74e-44FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_ca819317444dcb86559790a95de50e7bp9@Ankrd24
2.74e-44FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_ca819317444dcb86559790a95de50e7bp1@Espnl
2.74e-44FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_ca819317444dcb86559790a95de50e7bp2@Slc26a5
2.74e-44FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_ca819317444dcb86559790a95de50e7bp@chr9:50968647..50968668, -
2.74e-44FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_ca819317444dcb86559790a95de50e7bp@chr3:154459184..154459195, +
2.74e-44FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_ca819317444dcb86559790a95de50e7bp3@Strc
2.74e-44FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_ca819317444dcb86559790a95de50e7bp@chr15:65641741..65641748, +
2.74e-44FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_ca819317444dcb86559790a95de50e7bp@chr17:27252925..27252939, +

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