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FFCP PHASE1:Mm9::chr6:103461350..103461367,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12661
|EntrezGene=12661
|HGNC=
|HGNC=
|MCL_coexpression_id=1203
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=26bp_to_uc009dcm.1_5end
|association_with_transcript=26bp_to_uc009dcm.1_5end
|cluster_id=chr6:103461350..103461367,+
|description=CAGE_peak_1_at_Chl1_5end
|description=CAGE_peak_1_at_Chl1_5end
|id=chr6:103461350..103461367,+
|id=chr6:103461350..103461367,+
|ontology_enrichment_celltype=CL:0000540!1.32e-15!33;CL:0000047!1.32e-15!33;CL:0000031!1.32e-15!33;CL:0000404!1.32e-15!33;CL:0000117!1.73e-12!23;CL:0000337!1.73e-12!23;CL:0002319!4.97e-12!43;CL:0000221!6.74e-12!44;CL:0000133!6.74e-12!44;CL:0000393!1.04e-10!39;CL:0000211!1.04e-10!39;CL:0000055!4.36e-08!50
|ontology_enrichment_celltype=CL:0000540!1.32e-15!33;CL:0000047!1.32e-15!33;CL:0000031!1.32e-15!33;CL:0000404!1.32e-15!33;CL:0000117!1.73e-12!23;CL:0000337!1.73e-12!23;CL:0002319!4.97e-12!43;CL:0000221!6.74e-12!44;CL:0000133!6.74e-12!44;CL:0000393!1.04e-10!39;CL:0000211!1.04e-10!39;CL:0000055!4.36e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.11e-18,33;CL:0000047,6.11e-18,33;CL:0000031,6.11e-18,33;CL:0000404,6.11e-18,33;CL:0000117,6.78e-15,23;CL:0000337,6.78e-15,23;CL:0000393,2.88e-13,39;CL:0000211,2.88e-13,39;CL:0002319,1.79e-12,43;CL:0000221,6.52e-12,44;CL:0000133,6.52e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.78e-27!75;UBERON:0001016!5.78e-27!75;UBERON:0001017!8.80e-27!73;UBERON:0005743!8.80e-27!73;UBERON:0004121!2.00e-25!102;UBERON:0000924!2.00e-25!102;UBERON:0006601!2.00e-25!102;UBERON:0001049!8.85e-21!52;UBERON:0005068!8.85e-21!52;UBERON:0006241!8.85e-21!52;UBERON:0007135!8.85e-21!52;UBERON:0000955!2.61e-19!50;UBERON:0006238!2.61e-19!50;UBERON:0002616!3.27e-19!49;UBERON:0002020!3.65e-19!34;UBERON:0000033!9.61e-19!63;UBERON:0002346!6.21e-18!71;UBERON:0003075!6.21e-18!71;UBERON:0007284!6.21e-18!71;UBERON:0003080!2.08e-16!40;UBERON:0002791!3.51e-16!29;UBERON:0003528!3.51e-16!29;UBERON:0001893!3.51e-16!29;UBERON:0002780!9.49e-16!39;UBERON:0001890!9.49e-16!39;UBERON:0006240!9.49e-16!39;UBERON:0003056!3.55e-15!49;UBERON:0007811!2.83e-14!86;UBERON:0000153!6.10e-14!94;UBERON:0000956!7.22e-12!21;UBERON:0001869!7.22e-12!21;UBERON:0000203!7.22e-12!21;UBERON:0002619!3.27e-10!17;UBERON:0002021!1.14e-08!10;UBERON:0000411!1.14e-08!10;UBERON:0001950!1.14e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.31e-28,73;UBERON:0001016,6.73e-28,75;UBERON:0004121,9.83e-28,95;UBERON:0000924,9.83e-28,95;UBERON:0006601,9.83e-28,95;UBERON:0000073,2.51e-23,54;UBERON:0001049,1.45e-21,52;UBERON:0005068,1.45e-21,52;UBERON:0006241,1.45e-21,52;UBERON:0007135,1.45e-21,52;UBERON:0010371,2.11e-21,73;UBERON:0002020,2.75e-21,34;UBERON:0002346,1.33e-20,64;UBERON:0003075,1.33e-20,64;UBERON:0007284,1.33e-20,64;UBERON:0003528,1.10e-17,29;UBERON:0002791,1.10e-17,29;UBERON:0001893,1.10e-17,29;UBERON:0000955,1.49e-17,47;UBERON:0006238,1.49e-17,47;UBERON:0002616,2.04e-17,46;UBERON:0003080,6.85e-16,40;UBERON:0002780,3.89e-15,39;UBERON:0001890,3.89e-15,39;UBERON:0006240,3.89e-15,39;UBERON:0003056,4.88e-14,49;UBERON:0000956,1.80e-12,21;UBERON:0001869,1.80e-12,21;UBERON:0000203,1.80e-12,21;UBERON:0002619,1.94e-10,17;UBERON:0002021,3.10e-10,10;UBERON:0000411,3.10e-10,10;UBERON:0001950,3.10e-10,10;UBERON:0010314,1.09e-09,92
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0,0,5.78294373027274,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.777719596297134,0.139986421625363,0,0,0.725362142011344,0,0,0,0,11.7343547298567,19.5726662330652,13.9442908771359,0,0,0,0,0,0,1.53687322128622,8.08778976006126,6.61529097825284,6.73039876324422,9.14083150092171,11.0434270475807,10.0442455356262,3.45043695665651,11.0306254393203,22.0231761998777,21.4514727983115,18.5863905240055,10.6827893061457,13.4486836095542,17.7110545989298,5.862842979029,17.4456409109821,14.3630352910202,27.4004584490511,36.3047786037712,15.0983551118493,0.302904773332736,5.89458168832927,0,0,0,0,0,0,2.38755514223978,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0.29688427812965,0,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0,0,1.86391761218122,53.5788858531131,39.3759808809296,0,0,0,0,21.7196427136993,19.6725259212009,27.2669944084916,22.5971616249959,17.6443665557928,18.4931359658008,14.7639549391659,0.101839363850316,0,0,4.62972082950243,0,0,0.540186389416048,0.90422890701429,1.08858398642125,1.92170580427275,1.03071897015702,2.84573707812917,0,0,0.527853372491847,0.657587197282725,3.61461423993277,6.268538997399,13.7874031393322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,18.0849355765149,19.6547809644433,0,0.793351699990633,0.213288250535234,0.696710015581316,0.128867461322093,1.00841762311671,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0.795825888164603,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,2.45794972073607,0,0,0,0,0,0,11.8807436590966,13.0104972117346,0,0,3.15508219416257,2.73307121007647,10.3403230911743,11.2315335037699,9.58034298554295,13.0215204162863,8.90583543684768,8.18316402151673,9.88219444866309,2.24924921495265,0,0,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0,0,0.922305443831782,0.516856586336442,0,0,0.316036757935816,0,0,5.44703369206061,0.18006109403131,0.258717367565509,1.07168517515796,1.24138163549592,0.891844088010353,0.987294123612726,0,0.23467170806371,0,0.661585194164886,32.647478082413,15.8235138161987,8.44380948994182,10.8628833042854,10.3408766839389,0.874442509889552,11.8672193286726,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.690999869022119,0.954670618015114,0.316335993581135,0.609958401380546,4.53622431451565,12.3362094648537,12.4466661335321,16.9929076444874,11.571483801547,10.2084817373772,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,6.00421129193539,0,0,0.129920822977795,0,1.19208812868759,2.16351809135944,1.9199638532695,3.33189284828887,1.67654974641,2.82313318383153,3.60594158737084,2.88635524920988,2.68816875017609,94.0931092003127,0,0,0,0.19318959403219,0.93841237725591,0.549454872801795,4.50173596066038,0,33.885110557024,30.3814656094737,41.2484769676366,23.5438859810852,29.4585483501376,27.9495742034189,36.4512150125175,39.6282658837314,41.2359592175626,39.3497836931383,0.207574695168353,4.38927360741134,2.56100408631201,3.40349403895612,2.51535795153579,3.49302666055027,6.88964856185007,6.59312183164461,6.4183841918363,5.81203587056734,6.08350319736575,7.1678009726709,6.08669798554236,6.27446493567719,6.4902079919843,4.28664322154766,6.14186927507734,5.40145817298374,6.59337441285291,7.06554816645107,5.82877729055206,6.03417740941747,6.43777712857767,6.24989591519013,7.52875043322645,6.76916863133412,5.67076715905595,6.31367307450823,5.70377278152619,3.92799590160417,5.57584585183618,4.53120618927592,5.72923460437565,6.35241048862461,6.55882477335881,7.74412791607632,7.95367468714389,8.59484216193193,1.91288332068843,2.20591419119516,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0,0,5.78294373027274,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.777719596297134,0.139986421625363,0,0,0.725362142011344,0,0,0,0,11.7343547298567,19.5726662330652,13.9442908771359,0,0,0,0,0,0,1.53687322128622,8.08778976006126,6.61529097825284,6.73039876324422,9.14083150092171,11.0434270475807,10.0442455356262,3.45043695665651,11.0306254393203,22.0231761998777,21.4514727983115,18.5863905240055,10.6827893061457,13.4486836095542,17.7110545989298,5.862842979029,17.4456409109821,14.3630352910202,27.4004584490511,36.3047786037712,15.0983551118493,0.302904773332736,5.89458168832927,0,0,0,0,0,0,2.38755514223978,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0.29688427812965,0,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0,0,1.86391761218122,53.5788858531131,39.3759808809296,0,0,0,0,21.7196427136993,19.6725259212009,27.2669944084916,22.5971616249959,17.6443665557928,18.4931359658008,14.7639549391659,0.101839363850316,0,0,4.62972082950243,0,0,0.540186389416048,0.90422890701429,1.08858398642125,1.92170580427275,1.03071897015702,2.84573707812917,0,0,0.527853372491847,0.657587197282725,3.61461423993277,6.268538997399,13.7874031393322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,18.0849355765149,19.6547809644433,0,0.793351699990633,0.213288250535234,0.696710015581316,0.128867461322093,1.00841762311671,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0.795825888164603,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,2.45794972073607,0,0,0,0,0,0,11.8807436590966,13.0104972117346,0,0,3.15508219416257,2.73307121007647,10.3403230911743,11.2315335037699,9.58034298554295,13.0215204162863,8.90583543684768,8.18316402151673,9.88219444866309,2.24924921495265,0,0,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0,0,0.922305443831782,0.516856586336442,0,0,0.316036757935816,0,0,5.44703369206061,0.18006109403131,0.258717367565509,1.07168517515796,1.24138163549592,0.891844088010353,0.987294123612726,0,0.23467170806371,0,0.661585194164886,32.647478082413,15.8235138161987,8.44380948994182,10.8628833042854,10.3408766839389,0.874442509889552,11.8672193286726,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.690999869022119,0.954670618015114,0.316335993581135,0.609958401380546,4.53622431451565,12.3362094648537,12.4466661335321,16.9929076444874,11.571483801547,10.2084817373772,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,6.00421129193539,0,0,0.129920822977795,0,1.19208812868759,2.16351809135944,1.9199638532695,3.33189284828887,1.67654974641,2.82313318383153,3.60594158737084,2.88635524920988,2.68816875017609,94.0931092003127,0,0,0,0.19318959403219,0.93841237725591,0.549454872801795,4.50173596066038,0,33.885110557024,30.3814656094737,41.2484769676366,23.5438859810852,29.4585483501376,27.9495742034189,36.4512150125175,39.6282658837314,41.2359592175626,39.3497836931383,0.207574695168353,4.38927360741134,2.56100408631201,3.40349403895612,2.51535795153579,3.49302666055027,6.88964856185007,6.59312183164461,6.4183841918363,5.81203587056734,6.08350319736575,7.1678009726709,6.08669798554236,6.27446493567719,6.4902079919843,4.28664322154766,6.14186927507734,5.40145817298374,6.59337441285291,7.06554816645107,5.82877729055206,6.03417740941747,6.43777712857767,6.24989591519013,7.52875043322645,6.76916863133412,5.67076715905595,6.31367307450823,5.70377278152619,3.92799590160417,5.57584585183618,4.53120618927592,5.72923460437565,6.35241048862461,6.55882477335881,7.74412791607632,7.95367468714389,8.59484216193193,1.91288332068843,2.20591419119516,0.695603506861264
|short_description=p1@Chl1
|short_description=p1@Chl1
}}
}}

Latest revision as of 10:28, 26 September 2015

Short description:p1@Chl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chl1_5end
Coexpression cluster:MCL_coexpression_mm9:1203
Association with transcript: 26bp_to_uc009dcm.1_5end
EntrezGene:Chl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.45
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F636.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F95.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B253.58
cerebellum, neonate N30.CNhs11135.1395-42I239.38
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F127.27
cortex, adult.CNhs10473.12-14D522.60
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B214.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B513.79
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E818.08
hippocampus, neonate N00.CNhs11228.627-43G119.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.88
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C332.65
skin, neonate N00.CNhs11124.650-25G415.82
skin, neonate N03.CNhs11215.662-22H38.44
skin, neonate N06.CNhs11097.693-20I510.86
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C911.87
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D512.34
stomach, embryo E18.CNhs10999.1286-20C612.45
stomach, neonate N03.CNhs11193.1340-24B816.99
stomach, neonate N07.CNhs11210.718-18A911.57
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A23.61
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B494.09
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.54
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A636.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A841.24
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.11e-1833
neuronal stem cell6.11e-1833
neuroblast6.11e-1833
electrically signaling cell6.11e-1833
CNS neuron (sensu Vertebrata)6.78e-1523
neuroblast (sensu Vertebrata)6.78e-1523
electrically responsive cell2.88e-1339
electrically active cell2.88e-1339
neural cell1.79e-1243
ectodermal cell6.52e-1244
neurectodermal cell6.52e-1244

Uber anatomy
Ontology termp-valuen
central nervous system3.31e-2873
nervous system6.73e-2875
ectoderm-derived structure9.83e-2895
ectoderm9.83e-2895
presumptive ectoderm9.83e-2895
regional part of nervous system2.51e-2354
neural tube1.45e-2152
neural rod1.45e-2152
future spinal cord1.45e-2152
neural keel1.45e-2152
ecto-epithelium2.11e-2173
gray matter2.75e-2134
neurectoderm1.33e-2064
neural plate1.33e-2064
presumptive neural plate1.33e-2064
brain grey matter1.10e-1729
regional part of telencephalon1.10e-1729
telencephalon1.10e-1729
brain1.49e-1747
future brain1.49e-1747
regional part of brain2.04e-1746
anterior neural tube6.85e-1640
regional part of forebrain3.89e-1539
forebrain3.89e-1539
future forebrain3.89e-1539
pre-chordal neural plate4.88e-1449
cerebral cortex1.80e-1221
cerebral hemisphere1.80e-1221
pallium1.80e-1221
regional part of cerebral cortex1.94e-1017
occipital lobe3.10e-1010
visual cortex3.10e-1010
neocortex3.10e-1010
structure with developmental contribution from neural crest1.09e-0992
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