FFCP PHASE1:Mm9::chr16:36277231..36277268,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20861 | |EntrezGene=20861 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1695 | |||
|TSSclassifier=NA | |||
|UniProt=P35175,Q497J0 | |UniProt=P35175,Q497J0 | ||
|association_with_transcript=0bp_to_NM_001082543,uc007zck.1_5end | |association_with_transcript=0bp_to_NM_001082543,uc007zck.1_5end | ||
|cluster_id=chr16:36277231..36277268,+ | |||
|description=CAGE_peak_1_at_Stfa1_5end | |description=CAGE_peak_1_at_Stfa1_5end | ||
|id=chr16:36277231..36277268,+ | |id=chr16:36277231..36277268,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.33e-10,3;DOID:4045,2.33e-10,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.85e-09,22;UBERON:0007499,4.85e-09,22;UBERON:0006925,4.85e-09,22;UBERON:0009497,4.85e-09,22;UBERON:0000015,4.85e-09,22;UBERON:0002423,4.85e-09,22;UBERON:0006235,4.85e-09,22;UBERON:0008835,4.85e-09,22;UBERON:0003894,4.85e-09,22;UBERON:0004161,4.85e-09,22;UBERON:0008836,4.85e-09,22;UBERON:0009854,1.36e-08,23;UBERON:0009856,1.36e-08,23;UBERON:0002365,8.31e-08,25;UBERON:0002330,8.31e-08,25;UBERON:0005256,3.11e-07,45;UBERON:0005172,9.48e-07,49;UBERON:0005173,9.48e-07,49;UBERON:0002417,9.48e-07,49;UBERON:0000916,9.48e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,2.09409497589519,2.35292595212406,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.691846491768175,0,0.23517741427141,0,0,0,0,1.61766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,4.52720700097476,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.449724224769707,2.23146133527353,4.3411888755435,6.11102044275408,4.31544206176216,9.07957269940198,1.09824565275233,11.5014565221884,2.23284568601102,0.624075346229121,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.162886959353576,0,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13025098687134,1.56813604813205,0.954978752025092,0.328281799490123,0,0,0,5.15967169908056,14.6303676622072,7.15800136617826,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.743881101528023,0,0,0,0,0,0,0,0.258319646955462,0.675824501963113,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.735374033800057,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0.842773567228942,0.704276676453562,0.34461281373368,0,0.231768651889711,0,0.824171801606613,0.294397840268795,1.02860775715625,1.24233064311536,1.43061713968393,0.436039249896986,0.376437521661322,0.423073039458382,0,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,1.54936841185966,1.15743966588685,0.249810577937946,0.935726433781634,0.429742108096597,0.382576664137687,1.32354851471709,1.62307484934295 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,2.09409497589519,2.35292595212406,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.691846491768175,0,0.23517741427141,0,0,0,0,1.61766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,4.52720700097476,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.449724224769707,2.23146133527353,4.3411888755435,6.11102044275408,4.31544206176216,9.07957269940198,1.09824565275233,11.5014565221884,2.23284568601102,0.624075346229121,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.162886959353576,0,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13025098687134,1.56813604813205,0.954978752025092,0.328281799490123,0,0,0,5.15967169908056,14.6303676622072,7.15800136617826,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.743881101528023,0,0,0,0,0,0,0,0.258319646955462,0.675824501963113,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.735374033800057,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0.842773567228942,0.704276676453562,0.34461281373368,0,0.231768651889711,0,0.824171801606613,0.294397840268795,1.02860775715625,1.24233064311536,1.43061713968393,0.436039249896986,0.376437521661322,0.423073039458382,0,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,1.54936841185966,1.15743966588685,0.249810577937946,0.935726433781634,0.429742108096597,0.382576664137687,1.32354851471709,1.62307484934295 | ||
|short_description=p1@Stfa1 | |short_description=p1@Stfa1 | ||
}} | }} |
Latest revision as of 23:09, 1 October 2015
Short description: | p1@Stfa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stfa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1695 |
Association with transcript: | 0bp_to_NM_001082543, uc007zck.1_5end |
EntrezGene: | Stfa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 4.85e-09 | 22 |
epithelial sac | 4.85e-09 | 22 |
digestive gland | 4.85e-09 | 22 |
epithelium of foregut-midgut junction | 4.85e-09 | 22 |
anatomical boundary | 4.85e-09 | 22 |
hepatobiliary system | 4.85e-09 | 22 |
foregut-midgut junction | 4.85e-09 | 22 |
hepatic diverticulum | 4.85e-09 | 22 |
liver primordium | 4.85e-09 | 22 |
septum transversum | 4.85e-09 | 22 |
liver bud | 4.85e-09 | 22 |
digestive tract diverticulum | 1.36e-08 | 23 |
sac | 1.36e-08 | 23 |
exocrine gland | 8.31e-08 | 25 |
exocrine system | 8.31e-08 | 25 |
trunk mesenchyme | 3.11e-07 | 45 |
abdomen element | 9.48e-07 | 49 |
abdominal segment element | 9.48e-07 | 49 |
abdominal segment of trunk | 9.48e-07 | 49 |
abdomen | 9.48e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.33e-10 | 3 |
muscle cancer | 2.33e-10 | 3 |