FFCP PHASE1:Mm9::chr5:87233385..87233392,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231386 | |EntrezGene=231386 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PW44,Q8C4W4,D6RG95 | |UniProt=E9PW44,Q8C4W4,D6RG95 | ||
|association_with_transcript=-122bp_to_NM_177680,uc008xxw.1_5end | |association_with_transcript=-122bp_to_NM_177680,uc008xxw.1_5end | ||
|cluster_id=chr5:87233385..87233392,+ | |||
|description=CAGE_peak_7_at_Ythdc1_5end | |description=CAGE_peak_7_at_Ythdc1_5end | ||
|id=chr5:87233385..87233392,+ | |id=chr5:87233385..87233392,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.11e-08,32;CL:0002032,2.11e-08,32;CL:0000037,2.11e-08,32;CL:0000837,2.11e-08,32;CL:0000034,2.20e-07,97;CL:0002320,5.12e-07,46;CL:0000134,5.12e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.62e-07,3;DOID:4045,3.62e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.12e-07,46 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0.60492842261366,1.50268718983904,0.33575854382378,0,0.387369970324729,2.111830832275,0.468129052643987,0,0,0,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0,0,0.17008658030214,0.297872853602656,0.522399578277871,0.159992422793407,0,0.57423196411502,0.86152399231815,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0,0.612508068787107,0.837063261473815,3.1253413780952,1.0470474879476,1.17646297606203,0,1.94204141212461,0.125896817975577,0,0,0,0,0,0,0,0,0.838913030288682,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.151452386666368,0.0755715601067855,1.44932244350839,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,1.43778149407104,2.39961092397363,1.14363204365758,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0.278047249225598,0,0.61734640922383,0,0.702213187313235,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0.697601834251224,0.804820204198858,0.116765342367169,0.493679549740441,0,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0.264450566663544,0.426576501070468,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0.784993639206874,0,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0,0,0.938686832254841,0.21183207086382,0,1.6488625294148,0.484393280087717,0.301564624640779,0.119372344003136,0,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,2.71965487990169,4.05859211738608,1.65839968565309,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0,0.381034033274999,0.100826185136841,0.0974578807397524,0,0.350630706544707,0.680191150845634,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,0,0,0,0.237270036248348,0.197008964751127,0,0.619747364743864,0.192906610981141,0,0,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0.640595388419176,0,0.454999239389536,0.60492842261366,1.50268718983904,0.33575854382378,0,0.387369970324729,2.111830832275,0.468129052643987,0,0,0,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0,0,0.17008658030214,0.297872853602656,0.522399578277871,0.159992422793407,0,0.57423196411502,0.86152399231815,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0,0.612508068787107,0.837063261473815,3.1253413780952,1.0470474879476,1.17646297606203,0,1.94204141212461,0.125896817975577,0,0,0,0,0,0,0,0,0.838913030288682,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.151452386666368,0.0755715601067855,1.44932244350839,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,1.43778149407104,2.39961092397363,1.14363204365758,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0.278047249225598,0,0.61734640922383,0,0.702213187313235,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0.697601834251224,0.804820204198858,0.116765342367169,0.493679549740441,0,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0.264450566663544,0.426576501070468,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0.784993639206874,0,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0,0,0.938686832254841,0.21183207086382,0,1.6488625294148,0.484393280087717,0.301564624640779,0.119372344003136,0,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,2.71965487990169,4.05859211738608,1.65839968565309,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0,0.381034033274999,0.100826185136841,0.0974578807397524,0,0.350630706544707,0.680191150845634,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,0,0,0,0.237270036248348,0.197008964751127,0,0.619747364743864,0.192906610981141,0,0,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p7@Ythdc1 | |short_description=p7@Ythdc1 | ||
}} | }} |
Latest revision as of 06:34, 26 September 2015
Short description: | p7@Ythdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ythdc1_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_NM_177680, uc008xxw.1_5end |
EntrezGene: | Ythdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.11e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.11e-08 | 32 |
hematopoietic stem cell | 2.11e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.11e-08 | 32 |
stem cell | 2.20e-07 | 97 |
connective tissue cell | 5.12e-07 | 46 |
mesenchymal cell | 5.12e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.12e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.62e-07 | 3 |
muscle cancer | 3.62e-07 | 3 |