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FFCP PHASE1:Mm9::chr5:34631024..34631048,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231125
|EntrezGene=231125
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=D3Z3F0
|UniProt=D3Z3F0
|association_with_transcript=37bp_to_ENSMUST00000114368_5end
|association_with_transcript=37bp_to_ENSMUST00000114368_5end
|cluster_id=chr5:34631024..34631048,-
|description=CAGE_peak_3_at_Zfyve28_5end
|description=CAGE_peak_3_at_Zfyve28_5end
|id=chr5:34631024..34631048,-
|id=chr5:34631024..34631048,-
|ontology_enrichment_celltype=CL:0000221!1.74e-16!44;CL:0000133!1.74e-16!44;CL:0002319!5.17e-16!43;CL:0000055!9.31e-13!50;CL:0000540!1.96e-12!33;CL:0000047!1.96e-12!33;CL:0000031!1.96e-12!33;CL:0000404!1.96e-12!33;CL:0000393!6.30e-10!39;CL:0000211!6.30e-10!39;CL:0000117!1.06e-09!23;CL:0000337!1.06e-09!23
|ontology_enrichment_celltype=CL:0000221!1.74e-16!44;CL:0000133!1.74e-16!44;CL:0002319!5.17e-16!43;CL:0000055!9.31e-13!50;CL:0000540!1.96e-12!33;CL:0000047!1.96e-12!33;CL:0000031!1.96e-12!33;CL:0000404!1.96e-12!33;CL:0000393!6.30e-10!39;CL:0000211!6.30e-10!39;CL:0000117!1.06e-09!23;CL:0000337!1.06e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000221,5.54e-18,44;CL:0000133,5.54e-18,44;CL:0002319,3.65e-17,43;CL:0000117,1.30e-11,23;CL:0000337,1.30e-11,23;CL:0000540,3.52e-11,33;CL:0000047,3.52e-11,33;CL:0000031,3.52e-11,33;CL:0000404,3.52e-11,33;CL:0002321,3.64e-09,70;CL:0000393,1.16e-08,39;CL:0000211,1.16e-08,39;CL:0002453,1.31e-07,8;CL:0000333,2.24e-07,10;CL:0000095,2.24e-07,10;CL:0000243,2.24e-07,10;CL:0000123,2.24e-07,10;CL:0000125,2.24e-07,10;CL:0000030,2.24e-07,10;CL:0000339,2.24e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.71e-33!75;UBERON:0001016!9.71e-33!75;UBERON:0001017!4.71e-32!73;UBERON:0005743!4.71e-32!73;UBERON:0004121!2.88e-30!102;UBERON:0000924!2.88e-30!102;UBERON:0006601!2.88e-30!102;UBERON:0002346!1.66e-23!71;UBERON:0003075!1.66e-23!71;UBERON:0007284!1.66e-23!71;UBERON:0001049!3.13e-23!52;UBERON:0005068!3.13e-23!52;UBERON:0006241!3.13e-23!52;UBERON:0007135!3.13e-23!52;UBERON:0000033!6.67e-23!63;UBERON:0000955!1.12e-22!50;UBERON:0006238!1.12e-22!50;UBERON:0002616!6.73e-22!49;UBERON:0002020!2.11e-19!34;UBERON:0003056!1.39e-18!49;UBERON:0003080!2.54e-17!40;UBERON:0002791!6.08e-17!29;UBERON:0003528!6.08e-17!29;UBERON:0001893!6.08e-17!29;UBERON:0002780!9.67e-17!39;UBERON:0001890!9.67e-17!39;UBERON:0006240!9.67e-17!39;UBERON:0000956!3.06e-13!21;UBERON:0001869!3.06e-13!21;UBERON:0000203!3.06e-13!21;UBERON:0007811!2.24e-12!86;UBERON:0002619!2.89e-11!17;UBERON:0000153!8.93e-11!94;UBERON:0002021!1.56e-08!10;UBERON:0000411!1.56e-08!10;UBERON:0001950!1.56e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.74e-42,75;UBERON:0001017,1.39e-41,73;UBERON:0004121,4.65e-38,95;UBERON:0000924,4.65e-38,95;UBERON:0006601,4.65e-38,95;UBERON:0000073,9.63e-36,54;UBERON:0002346,3.54e-35,64;UBERON:0003075,3.54e-35,64;UBERON:0007284,3.54e-35,64;UBERON:0001049,2.99e-33,52;UBERON:0005068,2.99e-33,52;UBERON:0006241,2.99e-33,52;UBERON:0007135,2.99e-33,52;UBERON:0010371,9.32e-31,73;UBERON:0002020,3.20e-30,34;UBERON:0000955,1.99e-28,47;UBERON:0006238,1.99e-28,47;UBERON:0002616,4.75e-27,46;UBERON:0003528,2.39e-25,29;UBERON:0002791,2.39e-25,29;UBERON:0001893,2.39e-25,29;UBERON:0003056,2.29e-22,49;UBERON:0010314,1.02e-21,92;UBERON:0003080,1.54e-21,40;UBERON:0002780,1.69e-20,39;UBERON:0001890,1.69e-20,39;UBERON:0006240,1.69e-20,39;UBERON:0000956,1.74e-19,21;UBERON:0001869,1.74e-19,21;UBERON:0000203,1.74e-19,21;UBERON:0002619,1.47e-15,17;UBERON:0002021,1.69e-15,10;UBERON:0000411,1.69e-15,10;UBERON:0001950,1.69e-15,10;UBERON:0003076,2.37e-12,12;UBERON:0003057,2.37e-12,12;UBERON:0000025,8.13e-10,114;UBERON:0004111,3.86e-09,122;UBERON:0011216,1.10e-08,194;UBERON:0002240,3.49e-07,6;UBERON:0005174,3.49e-07,6;UBERON:0001137,3.49e-07,6;UBERON:0002420,5.45e-07,8;UBERON:0007245,5.45e-07,8;UBERON:0010009,5.45e-07,8;UBERON:0010011,5.45e-07,8;UBERON:0000454,5.45e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,4.36050312760893,3.07560655828261,2.52758868796568,1.67983705950435,2.87505128729943,0,0,0,0.257259436035947,0,0,0.809265843438391,0,1.26766280701236,0,0,0,0,0,2.69640099466564,3.07374644257244,1.45165457231869,1.35005938331691,1.26194976810829,3.42781181284564,1.10434270475807,0.489963196859816,0.766763768145891,0.919218786610021,5.50579404996943,4.21368215681119,3.37934373163736,0.527545150920775,1.00636407962651,1.04182674111352,4.4669279840221,1.68828783009504,2.29197371665215,1.17851434189467,1.70846016958924,1.86399445825301,0.37863096666592,1.20914496170857,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0.578397427679647,0,0.647067399789637,0,0,0,16.1029438356351,15.9179497178226,0,0,0,0,2.99581278809645,10.5225138648284,1.25654352112864,9.38651329038293,10.7400492078739,3.74018480207208,6.65189178577806,0,0.373220911830279,0,6.73413938836717,0,0.459804208866946,0,0.30140963567143,0.95251098811859,1.66547836370305,1.68663104207512,10.3481348295606,0.215567992932842,0.378212160335639,0.527853372491847,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0,0.493679549740441,0.492502392237286,0,0.438599962275997,0,0.134206418760372,4.6263788684108,2.16099685996497,0.330418782983798,0.264450566663544,0.213288250535234,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0,3.53211297973142,4.10240903072711,0,0.504941854408746,1.26203287766503,1.56175497718655,0.215423397732799,0.716906393857656,0.891194696329576,0.849229592366497,0.404810701674894,1.75353514746787,1.18586333383957,10.2822821254978,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0,0.21183207086382,0.220528398054962,0.49465875882444,0.484393280087717,0.844380948994182,0.238744688006273,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.324016022465404,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.299033092087958,0,2.33341426012857,2.45403664607689,3.21016638432478,8.9191501370773,3.3853140059427,0.629156066554265,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,6.21227026878773,9.20650473014354,9.73922372846974,12.0297227640581,14.3867329151835,10.5755145634558,8.10027000278167,6.30449684513909,5.89085131679466,9.31968561153276,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,1.02860775715625,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0.818462086339379,0.619747364743864,0.192906610981141,0.499621155875892,0.935726433781634,0.429742108096597,0.191288332068843,0.220591419119515,1.39120701372253
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,4.36050312760893,3.07560655828261,2.52758868796568,1.67983705950435,2.87505128729943,0,0,0,0.257259436035947,0,0,0.809265843438391,0,1.26766280701236,0,0,0,0,0,2.69640099466564,3.07374644257244,1.45165457231869,1.35005938331691,1.26194976810829,3.42781181284564,1.10434270475807,0.489963196859816,0.766763768145891,0.919218786610021,5.50579404996943,4.21368215681119,3.37934373163736,0.527545150920775,1.00636407962651,1.04182674111352,4.4669279840221,1.68828783009504,2.29197371665215,1.17851434189467,1.70846016958924,1.86399445825301,0.37863096666592,1.20914496170857,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0.578397427679647,0,0.647067399789637,0,0,0,16.1029438356351,15.9179497178226,0,0,0,0,2.99581278809645,10.5225138648284,1.25654352112864,9.38651329038293,10.7400492078739,3.74018480207208,6.65189178577806,0,0.373220911830279,0,6.73413938836717,0,0.459804208866946,0,0.30140963567143,0.95251098811859,1.66547836370305,1.68663104207512,10.3481348295606,0.215567992932842,0.378212160335639,0.527853372491847,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0,0.493679549740441,0.492502392237286,0,0.438599962275997,0,0.134206418760372,4.6263788684108,2.16099685996497,0.330418782983798,0.264450566663544,0.213288250535234,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0,3.53211297973142,4.10240903072711,0,0.504941854408746,1.26203287766503,1.56175497718655,0.215423397732799,0.716906393857656,0.891194696329576,0.849229592366497,0.404810701674894,1.75353514746787,1.18586333383957,10.2822821254978,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0,0.21183207086382,0.220528398054962,0.49465875882444,0.484393280087717,0.844380948994182,0.238744688006273,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.324016022465404,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.299033092087958,0,2.33341426012857,2.45403664607689,3.21016638432478,8.9191501370773,3.3853140059427,0.629156066554265,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,6.21227026878773,9.20650473014354,9.73922372846974,12.0297227640581,14.3867329151835,10.5755145634558,8.10027000278167,6.30449684513909,5.89085131679466,9.31968561153276,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,1.02860775715625,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0.818462086339379,0.619747364743864,0.192906610981141,0.499621155875892,0.935726433781634,0.429742108096597,0.191288332068843,0.220591419119515,1.39120701372253
|short_description=p3@Zfyve28
|short_description=p3@Zfyve28
}}
}}

Latest revision as of 23:26, 25 September 2015

Short description:p3@Zfyve28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zfyve28_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 37bp_to_ENSMUST00000114368_5end
EntrezGene:Zfyve28
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Zfyve28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I215.92
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B78.92
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system8.74e-4275
central nervous system1.39e-4173
ectoderm-derived structure4.65e-3895
ectoderm4.65e-3895
presumptive ectoderm4.65e-3895
regional part of nervous system9.63e-3654
neurectoderm3.54e-3564
neural plate3.54e-3564
presumptive neural plate3.54e-3564
neural tube2.99e-3352
neural rod2.99e-3352
future spinal cord2.99e-3352
neural keel2.99e-3352
ecto-epithelium9.32e-3173
gray matter3.20e-3034
brain1.99e-2847
future brain1.99e-2847
regional part of brain4.75e-2746
brain grey matter2.39e-2529
regional part of telencephalon2.39e-2529
telencephalon2.39e-2529
pre-chordal neural plate2.29e-2249
structure with developmental contribution from neural crest1.02e-2192
anterior neural tube1.54e-2140
regional part of forebrain1.69e-2039
forebrain1.69e-2039
future forebrain1.69e-2039
cerebral cortex1.74e-1921
cerebral hemisphere1.74e-1921
pallium1.74e-1921
regional part of cerebral cortex1.47e-1517
occipital lobe1.69e-1510
visual cortex1.69e-1510
neocortex1.69e-1510
posterior neural tube2.37e-1212
chordal neural plate2.37e-1212
tube8.13e-10114
anatomical conduit3.86e-09122
organ system subdivision1.10e-08194
spinal cord3.49e-076
dorsal region element3.49e-076
dorsum3.49e-076
basal ganglion5.45e-078
nuclear complex of neuraxis5.45e-078
aggregate regional part of brain5.45e-078
collection of basal ganglia5.45e-078
cerebral subcortex5.45e-078
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