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FFCP PHASE1:Mm9::chr7:5008484..5008508,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232821
|EntrezGene=232821
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3YWL5
|UniProt=D3YWL5
|association_with_transcript=-9bp_to_ENSMUST00000123956_5end
|association_with_transcript=-9bp_to_ENSMUST00000123956_5end
|cluster_id=chr7:5008484..5008508,+
|description=CAGE_peak_2_at_Ccdc106_5end
|description=CAGE_peak_2_at_Ccdc106_5end
|id=chr7:5008484..5008508,+
|id=chr7:5008484..5008508,+
|ontology_enrichment_celltype=CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000540!1.92e-11!33;CL:0000047!1.92e-11!33;CL:0000031!1.92e-11!33;CL:0000404!1.92e-11!33;CL:0000221!5.43e-11!44;CL:0000133!5.43e-11!44;CL:0002319!7.38e-11!43;CL:0000393!1.49e-07!39;CL:0000211!1.49e-07!39;CL:0000055!3.73e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-20,23;CL:0000337,3.51e-20,23;CL:0000540,9.56e-16,33;CL:0000047,9.56e-16,33;CL:0000031,9.56e-16,33;CL:0000404,9.56e-16,33;CL:0002319,1.24e-12,43;CL:0000221,4.06e-12,44;CL:0000133,4.06e-12,44;CL:0000393,7.27e-12,39;CL:0000211,7.27e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.17e-30!71;UBERON:0003075!6.17e-30!71;UBERON:0007284!6.17e-30!71;UBERON:0001017!3.58e-29!73;UBERON:0005743!3.58e-29!73;UBERON:0000073!6.72e-28!75;UBERON:0001016!6.72e-28!75;UBERON:0001049!8.94e-28!52;UBERON:0005068!8.94e-28!52;UBERON:0006241!8.94e-28!52;UBERON:0007135!8.94e-28!52;UBERON:0000033!9.36e-28!63;UBERON:0000955!2.78e-26!50;UBERON:0006238!2.78e-26!50;UBERON:0002616!1.27e-25!49;UBERON:0004121!1.31e-25!102;UBERON:0000924!1.31e-25!102;UBERON:0006601!1.31e-25!102;UBERON:0003056!9.23e-24!49;UBERON:0002020!2.49e-22!34;UBERON:0003080!1.47e-21!40;UBERON:0002780!4.81e-21!39;UBERON:0001890!4.81e-21!39;UBERON:0006240!4.81e-21!39;UBERON:0002791!5.49e-19!29;UBERON:0003528!5.49e-19!29;UBERON:0001893!5.49e-19!29;UBERON:0000153!1.26e-14!94;UBERON:0000956!4.11e-14!21;UBERON:0001869!4.11e-14!21;UBERON:0000203!4.11e-14!21;UBERON:0007811!5.33e-13!86;UBERON:0002619!7.45e-12!17;UBERON:0002021!7.67e-09!10;UBERON:0000411!7.67e-09!10;UBERON:0001950!7.67e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.88e-39,64;UBERON:0003075,1.88e-39,64;UBERON:0007284,1.88e-39,64;UBERON:0000073,1.90e-38,54;UBERON:0001017,1.75e-37,73;UBERON:0001049,2.01e-36,52;UBERON:0005068,2.01e-36,52;UBERON:0006241,2.01e-36,52;UBERON:0007135,2.01e-36,52;UBERON:0001016,6.76e-36,75;UBERON:0010371,5.38e-32,73;UBERON:0000955,1.09e-31,47;UBERON:0006238,1.09e-31,47;UBERON:0004121,3.14e-31,95;UBERON:0000924,3.14e-31,95;UBERON:0006601,3.14e-31,95;UBERON:0002616,9.08e-31,46;UBERON:0002020,4.81e-30,34;UBERON:0003056,8.04e-30,49;UBERON:0003080,1.56e-28,40;UBERON:0002780,8.56e-28,39;UBERON:0001890,8.56e-28,39;UBERON:0006240,8.56e-28,39;UBERON:0003528,3.01e-25,29;UBERON:0002791,3.01e-25,29;UBERON:0001893,3.01e-25,29;UBERON:0010314,3.43e-21,92;UBERON:0000956,2.99e-18,21;UBERON:0001869,2.99e-18,21;UBERON:0000203,2.99e-18,21;UBERON:0002619,5.27e-15,17;UBERON:0002021,5.02e-12,10;UBERON:0000411,5.02e-12,10;UBERON:0001950,5.02e-12,10;UBERON:0000025,4.00e-08,114;UBERON:0002420,4.59e-08,8;UBERON:0007245,4.59e-08,8;UBERON:0010009,4.59e-08,8;UBERON:0010011,4.59e-08,8;UBERON:0000454,4.59e-08,8;UBERON:0003076,4.60e-08,12;UBERON:0003057,4.60e-08,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,1.09843091367236,0.972149495371417,0.279972843250725,0,0,0,0,0,0,0,5.26022798234954,8.46385566835253,7.60597684207415,0,0,0,0,0,0.898800331555214,1.53687322128622,2.17748185847803,2.97013064329719,3.36519938162211,7.42692559449889,7.50953039235486,3.42974237801871,2.87536413054709,5.51531271966013,3.30347642998166,4.21368215681119,2.4577045320999,5.01167893374737,4.84884511092771,6.77187381723788,1.95428099300967,2.8138130501584,3.81995619442025,6.48182888042069,4.8406371471695,6.52398060388552,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,2.04946557908083,2.09446706813455,0,0,0,0,2.09706895166752,11.8950156732843,8.41884159156192,9.73416193076748,8.95004100656157,3.53239675751252,7.78758062725237,0.305518091550949,0.497627882440372,0.252722758433675,0.631325567659422,1.69156575851515,2.75882525320168,1.44049703844279,0.753524089178575,1.08858398642125,1.15302348256365,1.03071897015702,1.29351685369508,1.5089759505299,1.13463648100692,2.11141348996739,1.97276159184817,1.66828349535359,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,9.67333763394985,6.79170441703277,0,0,1.06644125267617,0.696710015581316,0.77320476793256,0.403367049246685,0.667134131534611,0.760902504450237,0,0.823494773620054,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,1.89667900953082,1.37098215131675,1.1270773567308,1.62921062276251,1.35766741017338,1.26244475802573,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.678980343100753,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.17211686592203,0,0,1.57754109708128,1.17131623288992,1.07711698866399,0,0,0,0,0.584511715822624,1.18586333383957,4.81981974632711,0.99358059645788,2.31485284767432,0.488660878060728,1.31976098378028,0,0.971122544619926,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,1.98067203434441,1.03486947026204,0.643011105094777,2.48276327099183,1.60531935841864,1.15184314421485,1.522324745573,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,1.26534397432454,0.813277868507395,1.18805874903981,1.46361807210128,1.09181281873089,1.07891477107857,1.1571483801547,0.26175594198403,0,0.621339313086926,1.12738587736838,0.299033092087958,0.330916980914195,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0.39061315453185,0.524296722128554,0.483168241652012,0.576060012515731,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0.19318959403219,0,1.09890974560359,0.214368379079066,0.501572104035363,20.8958181768315,14.7304075682297,16.0410743763031,17.3571714167124,10.2762377965596,12.8416962556249,15.5255175053315,9.90706647093285,13.1411298605419,9.83744592328458,0.62272408550506,0.798049746802062,1.53660245178721,0.243106717068294,1.25767897576789,1.83843508450014,2.22246727801615,1.03017528619447,0.962757628775446,1.01078884705519,2.02783439912192,1.50901073108861,0.842773567228942,0.704276676453562,0.918967503289812,1.42888107384922,0.811190281613988,1.15745532278223,0.412085900803307,0.883193520806384,1.71434626192708,0.887379030796687,0.476872379894642,0.726732083161643,0.376437521661322,1.18460451048347,1.09756783723664,1.57841826862706,0.950628796921032,1.12228454331548,1.54225523561426,0.788035859004508,0,0.154936841185966,0.578719832943424,1.99848462350357,0.467863216890817,1.71896843238639,0,0.220591419119515,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,1.09843091367236,0.972149495371417,0.279972843250725,0,0,0,0,0,0,0,5.26022798234954,8.46385566835253,7.60597684207415,0,0,0,0,0,0.898800331555214,1.53687322128622,2.17748185847803,2.97013064329719,3.36519938162211,7.42692559449889,7.50953039235486,3.42974237801871,2.87536413054709,5.51531271966013,3.30347642998166,4.21368215681119,2.4577045320999,5.01167893374737,4.84884511092771,6.77187381723788,1.95428099300967,2.8138130501584,3.81995619442025,6.48182888042069,4.8406371471695,6.52398060388552,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,2.04946557908083,2.09446706813455,0,0,0,0,2.09706895166752,11.8950156732843,8.41884159156192,9.73416193076748,8.95004100656157,3.53239675751252,7.78758062725237,0.305518091550949,0.497627882440372,0.252722758433675,0.631325567659422,1.69156575851515,2.75882525320168,1.44049703844279,0.753524089178575,1.08858398642125,1.15302348256365,1.03071897015702,1.29351685369508,1.5089759505299,1.13463648100692,2.11141348996739,1.97276159184817,1.66828349535359,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,9.67333763394985,6.79170441703277,0,0,1.06644125267617,0.696710015581316,0.77320476793256,0.403367049246685,0.667134131534611,0.760902504450237,0,0.823494773620054,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,1.89667900953082,1.37098215131675,1.1270773567308,1.62921062276251,1.35766741017338,1.26244475802573,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.678980343100753,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.17211686592203,0,0,1.57754109708128,1.17131623288992,1.07711698866399,0,0,0,0,0.584511715822624,1.18586333383957,4.81981974632711,0.99358059645788,2.31485284767432,0.488660878060728,1.31976098378028,0,0.971122544619926,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,1.98067203434441,1.03486947026204,0.643011105094777,2.48276327099183,1.60531935841864,1.15184314421485,1.522324745573,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,1.26534397432454,0.813277868507395,1.18805874903981,1.46361807210128,1.09181281873089,1.07891477107857,1.1571483801547,0.26175594198403,0,0.621339313086926,1.12738587736838,0.299033092087958,0.330916980914195,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0.39061315453185,0.524296722128554,0.483168241652012,0.576060012515731,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0.19318959403219,0,1.09890974560359,0.214368379079066,0.501572104035363,20.8958181768315,14.7304075682297,16.0410743763031,17.3571714167124,10.2762377965596,12.8416962556249,15.5255175053315,9.90706647093285,13.1411298605419,9.83744592328458,0.62272408550506,0.798049746802062,1.53660245178721,0.243106717068294,1.25767897576789,1.83843508450014,2.22246727801615,1.03017528619447,0.962757628775446,1.01078884705519,2.02783439912192,1.50901073108861,0.842773567228942,0.704276676453562,0.918967503289812,1.42888107384922,0.811190281613988,1.15745532278223,0.412085900803307,0.883193520806384,1.71434626192708,0.887379030796687,0.476872379894642,0.726732083161643,0.376437521661322,1.18460451048347,1.09756783723664,1.57841826862706,0.950628796921032,1.12228454331548,1.54225523561426,0.788035859004508,0,0.154936841185966,0.578719832943424,1.99848462350357,0.467863216890817,1.71896843238639,0,0.220591419119515,0.463735671240843
|short_description=p2@Ccdc106
|short_description=p2@Ccdc106
}}
}}

Latest revision as of 18:17, 26 September 2015

Short description:p2@Ccdc106
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ccdc106_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -9bp_to_ENSMUST00000123956_5end
EntrezGene:Ccdc106
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ccdc106

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.51e-2023
neuroblast (sensu Vertebrata)3.51e-2023
neuron9.56e-1633
neuronal stem cell9.56e-1633
neuroblast9.56e-1633
electrically signaling cell9.56e-1633
neural cell1.24e-1243
ectodermal cell4.06e-1244
neurectodermal cell4.06e-1244
electrically responsive cell7.27e-1239
electrically active cell7.27e-1239

Uber anatomy
Ontology termp-valuen
neurectoderm1.88e-3964
neural plate1.88e-3964
presumptive neural plate1.88e-3964
regional part of nervous system1.90e-3854
central nervous system1.75e-3773
neural tube2.01e-3652
neural rod2.01e-3652
future spinal cord2.01e-3652
neural keel2.01e-3652
nervous system6.76e-3675
ecto-epithelium5.38e-3273
brain1.09e-3147
future brain1.09e-3147
ectoderm-derived structure3.14e-3195
ectoderm3.14e-3195
presumptive ectoderm3.14e-3195
regional part of brain9.08e-3146
gray matter4.81e-3034
pre-chordal neural plate8.04e-3049
anterior neural tube1.56e-2840
regional part of forebrain8.56e-2839
forebrain8.56e-2839
future forebrain8.56e-2839
brain grey matter3.01e-2529
regional part of telencephalon3.01e-2529
telencephalon3.01e-2529
structure with developmental contribution from neural crest3.43e-2192
cerebral cortex2.99e-1821
cerebral hemisphere2.99e-1821
pallium2.99e-1821
regional part of cerebral cortex5.27e-1517
occipital lobe5.02e-1210
visual cortex5.02e-1210
neocortex5.02e-1210
tube4.00e-08114
basal ganglion4.59e-088
nuclear complex of neuraxis4.59e-088
aggregate regional part of brain4.59e-088
collection of basal ganglia4.59e-088
cerebral subcortex4.59e-088
posterior neural tube4.60e-0812
chordal neural plate4.60e-0812
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