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FFCP PHASE1:Mm9::chr5:22251998..22252086,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269629
|EntrezGene=269629
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=D3Z3S3,E9QN56,Q9CTN8
|UniProt=D3Z3S3,E9QN56,Q9CTN8
|association_with_transcript=0bp_to_ENSMUST00000073678,ENSMUST00000115141,NM_001081231,NM_029990,uc008wpv.2,uc012dst.1_5end
|association_with_transcript=0bp_to_ENSMUST00000073678,ENSMUST00000115141,NM_001081231,NM_029990,uc008wpv.2,uc012dst.1_5end
|cluster_id=chr5:22251998..22252086,+
|description=CAGE_peak_2_at_Lhfpl3_5end
|description=CAGE_peak_2_at_Lhfpl3_5end
|id=chr5:22251998..22252086,+
|id=chr5:22251998..22252086,+
|ontology_enrichment_celltype=CL:0000117!2.90e-13!23;CL:0000337!2.90e-13!23;CL:0000540!2.71e-12!33;CL:0000047!2.71e-12!33;CL:0000031!2.71e-12!33;CL:0000404!2.71e-12!33;CL:0000221!1.73e-11!44;CL:0000133!1.73e-11!44;CL:0002319!3.23e-11!43;CL:0000393!1.25e-08!39;CL:0000211!1.25e-08!39;CL:0000055!7.23e-08!50
|ontology_enrichment_celltype=CL:0000117!2.90e-13!23;CL:0000337!2.90e-13!23;CL:0000540!2.71e-12!33;CL:0000047!2.71e-12!33;CL:0000031!2.71e-12!33;CL:0000404!2.71e-12!33;CL:0000221!1.73e-11!44;CL:0000133!1.73e-11!44;CL:0002319!3.23e-11!43;CL:0000393!1.25e-08!39;CL:0000211!1.25e-08!39;CL:0000055!7.23e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.23e-13,23;CL:0000337,7.23e-13,23;CL:0000540,3.73e-10,33;CL:0000047,3.73e-10,33;CL:0000031,3.73e-10,33;CL:0000404,3.73e-10,33;CL:0000221,6.78e-09,44;CL:0000133,6.78e-09,44;CL:0002319,1.43e-08,43;CL:0000393,1.55e-07,39;CL:0000211,1.55e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.15e-33!102;UBERON:0000924!2.15e-33!102;UBERON:0006601!2.15e-33!102;UBERON:0002346!7.81e-31!71;UBERON:0003075!7.81e-31!71;UBERON:0007284!7.81e-31!71;UBERON:0000073!1.08e-29!75;UBERON:0001016!1.08e-29!75;UBERON:0001017!1.31e-29!73;UBERON:0005743!1.31e-29!73;UBERON:0000033!3.87e-26!63;UBERON:0001049!3.19e-24!52;UBERON:0005068!3.19e-24!52;UBERON:0006241!3.19e-24!52;UBERON:0007135!3.19e-24!52;UBERON:0000955!7.31e-23!50;UBERON:0006238!7.31e-23!50;UBERON:0003056!2.01e-22!49;UBERON:0002616!5.46e-22!49;UBERON:0002020!2.20e-18!34;UBERON:0003080!3.59e-18!40;UBERON:0002780!2.54e-17!39;UBERON:0001890!2.54e-17!39;UBERON:0006240!2.54e-17!39;UBERON:0002791!1.17e-14!29;UBERON:0003528!1.17e-14!29;UBERON:0001893!1.17e-14!29;UBERON:0000153!2.02e-13!94;UBERON:0007811!3.03e-13!86;UBERON:0000956!1.56e-09!21;UBERON:0001869!1.56e-09!21;UBERON:0000203!1.56e-09!21;UBERON:0002619!1.16e-08!17;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.80e-30,73;UBERON:0001016,1.56e-28,75;UBERON:0000073,4.17e-27,54;UBERON:0004121,8.42e-27,95;UBERON:0000924,8.42e-27,95;UBERON:0006601,8.42e-27,95;UBERON:0002346,8.35e-26,64;UBERON:0003075,8.35e-26,64;UBERON:0007284,8.35e-26,64;UBERON:0001049,5.64e-25,52;UBERON:0005068,5.64e-25,52;UBERON:0006241,5.64e-25,52;UBERON:0007135,5.64e-25,52;UBERON:0010371,1.67e-21,73;UBERON:0000955,3.27e-20,47;UBERON:0006238,3.27e-20,47;UBERON:0003056,1.54e-19,49;UBERON:0002616,3.54e-19,46;UBERON:0002020,7.65e-19,34;UBERON:0003080,7.94e-17,40;UBERON:0010314,1.19e-16,92;UBERON:0002780,8.17e-16,39;UBERON:0001890,8.17e-16,39;UBERON:0006240,8.17e-16,39;UBERON:0003528,3.53e-14,29;UBERON:0002791,3.53e-14,29;UBERON:0001893,3.53e-14,29;UBERON:0002021,1.34e-09,10;UBERON:0000411,1.34e-09,10;UBERON:0001950,1.34e-09,10;UBERON:0002619,3.23e-09,17;UBERON:0003076,6.38e-09,12;UBERON:0003057,6.38e-09,12;UBERON:0002420,2.66e-08,8;UBERON:0007245,2.66e-08,8;UBERON:0010009,2.66e-08,8;UBERON:0010011,2.66e-08,8;UBERON:0000454,2.66e-08,8;UBERON:0000956,6.32e-08,21;UBERON:0001869,6.32e-08,21;UBERON:0000203,6.32e-08,21;UBERON:0002240,2.06e-07,6;UBERON:0005174,2.06e-07,6;UBERON:0001137,2.06e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,4.7609188134483,1.90149421051854,0,0,0,0,0,3.89480143673926,3.45796474789399,0.622137673850866,0.540023753326763,0.420649922702764,16.2821061110168,13.0312439161452,3.42974237801871,1.82106394934649,0.919218786610021,29.731287869835,26.8143409978894,21.3513081226178,4.74790635828698,2.92760459527711,3.12548022334056,19.5428099300967,20.2594539611405,16.1966142643419,18.8562294703147,19.0778052270798,8.76077395378913,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0,0,0.68510327831436,0,2.22663208597237,1.04091196059682,0.304465478312141,1.15307748628029,0.60289056221049,1.29347577849275,0.502666365318702,0,0,0,0,0,0,0,10.5401086924157,9.21565509979202,0,0,0,0,46.1355169366854,16.0125210986519,10.178002521142,8.16974304903699,7.92717917724025,28.4669621046597,30.9880812459417,0.407357455401265,0,0,9.89076722666428,0.260240885925407,0.689706313300419,0.900310649026746,3.46621081022145,4.55844544313897,4.35586648968489,3.46696380870997,30.2682943764648,0,0.378212160335639,0.703804496655795,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,8.41159794256509,4.11618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.420814919341911,0.632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5046120976805,26.8414762296145,0,0,0.315508219416257,0.390438744296638,0.646270193198397,1.91175038362042,6.90675889655422,7.07691326972081,0,0.292255857911312,0,30.8468463764935,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,11.5749465956288,0.36012218806262,0.129358683782755,0,0.532020700926821,1.42695054081656,2.79733335023606,3.04464949114599,0,0,0.220528398054962,0,0.322928853391811,0.422190474497091,0,0.164140899745061,0,26.8866687915239,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,5.64751842617067,11.0478056761722,8.02053718815155,9.45192502890282,6.16574267793578,4.5323633843382,6.07520250208625,4.95353323546643,7.25027854374727,7.7664046762773,0.103787347584177,1.19707462020309,0.682934423016537,0.972426868273176,1.25767897576789,0.919217542250071,2.66696073361938,1.23621034343337,3.85103051510178,2.02157769411038,3.04175159868288,1.50901073108861,1.68554713445788,2.43295579138503,2.12511235135769,2.38146845641537,2.43357084484197,2.12200142510076,2.88460130562315,2.64958056241915,2.40008476669791,1.95223386775271,1.1921809497366,2.76158191601424,2.1645157495526,2.11536519729191,1.64635175585495,1.31534855718921,2.98769050460896,1.68342681497322,2.84724043498018,2.06859412988683,3.27384834535751,2.16911577660352,0.964533054905707,2.74791635731741,2.33931608445408,1.28922632428979,1.72159498861959,1.10295709559758,1.39120701372253
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,4.7609188134483,1.90149421051854,0,0,0,0,0,3.89480143673926,3.45796474789399,0.622137673850866,0.540023753326763,0.420649922702764,16.2821061110168,13.0312439161452,3.42974237801871,1.82106394934649,0.919218786610021,29.731287869835,26.8143409978894,21.3513081226178,4.74790635828698,2.92760459527711,3.12548022334056,19.5428099300967,20.2594539611405,16.1966142643419,18.8562294703147,19.0778052270798,8.76077395378913,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0,0,0.68510327831436,0,2.22663208597237,1.04091196059682,0.304465478312141,1.15307748628029,0.60289056221049,1.29347577849275,0.502666365318702,0,0,0,0,0,0,0,10.5401086924157,9.21565509979202,0,0,0,0,46.1355169366854,16.0125210986519,10.178002521142,8.16974304903699,7.92717917724025,28.4669621046597,30.9880812459417,0.407357455401265,0,0,9.89076722666428,0.260240885925407,0.689706313300419,0.900310649026746,3.46621081022145,4.55844544313897,4.35586648968489,3.46696380870997,30.2682943764648,0,0.378212160335639,0.703804496655795,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,8.41159794256509,4.11618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.420814919341911,0.632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5046120976805,26.8414762296145,0,0,0.315508219416257,0.390438744296638,0.646270193198397,1.91175038362042,6.90675889655422,7.07691326972081,0,0.292255857911312,0,30.8468463764935,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,11.5749465956288,0.36012218806262,0.129358683782755,0,0.532020700926821,1.42695054081656,2.79733335023606,3.04464949114599,0,0,0.220528398054962,0,0.322928853391811,0.422190474497091,0,0.164140899745061,0,26.8866687915239,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,5.64751842617067,11.0478056761722,8.02053718815155,9.45192502890282,6.16574267793578,4.5323633843382,6.07520250208625,4.95353323546643,7.25027854374727,7.7664046762773,0.103787347584177,1.19707462020309,0.682934423016537,0.972426868273176,1.25767897576789,0.919217542250071,2.66696073361938,1.23621034343337,3.85103051510178,2.02157769411038,3.04175159868288,1.50901073108861,1.68554713445788,2.43295579138503,2.12511235135769,2.38146845641537,2.43357084484197,2.12200142510076,2.88460130562315,2.64958056241915,2.40008476669791,1.95223386775271,1.1921809497366,2.76158191601424,2.1645157495526,2.11536519729191,1.64635175585495,1.31534855718921,2.98769050460896,1.68342681497322,2.84724043498018,2.06859412988683,3.27384834535751,2.16911577660352,0.964533054905707,2.74791635731741,2.33931608445408,1.28922632428979,1.72159498861959,1.10295709559758,1.39120701372253
|short_description=p2@Lhfpl3
|short_description=p2@Lhfpl3
}}
}}

Latest revision as of 20:08, 25 September 2015

Short description:p2@Lhfpl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lhfpl3_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_ENSMUST00000073678, ENSMUST00000115141, NM_001081231, NM_029990, uc008wpv.2, uc012dst.1_5end
EntrezGene:Lhfpl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lhfpl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A446.14
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F228.47
diencephalon, neonate N30.CNhs11201.1388-42B230.99
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A230.27
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C230.50
medulla oblongata, neonate N30.CNhs11200.1396-42A326.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I930.85
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.23e-1323
neuroblast (sensu Vertebrata)7.23e-1323
neuron3.73e-1033
neuronal stem cell3.73e-1033
neuroblast3.73e-1033
electrically signaling cell3.73e-1033
ectodermal cell6.78e-0944
neurectodermal cell6.78e-0944
neural cell1.43e-0843
electrically responsive cell1.55e-0739
electrically active cell1.55e-0739

Uber anatomy
Ontology termp-valuen
central nervous system7.80e-3073
nervous system1.56e-2875
regional part of nervous system4.17e-2754
ectoderm-derived structure8.42e-2795
ectoderm8.42e-2795
presumptive ectoderm8.42e-2795
neurectoderm8.35e-2664
neural plate8.35e-2664
presumptive neural plate8.35e-2664
neural tube5.64e-2552
neural rod5.64e-2552
future spinal cord5.64e-2552
neural keel5.64e-2552
ecto-epithelium1.67e-2173
brain3.27e-2047
future brain3.27e-2047
pre-chordal neural plate1.54e-1949
regional part of brain3.54e-1946
gray matter7.65e-1934
anterior neural tube7.94e-1740
structure with developmental contribution from neural crest1.19e-1692
regional part of forebrain8.17e-1639
forebrain8.17e-1639
future forebrain8.17e-1639
brain grey matter3.53e-1429
regional part of telencephalon3.53e-1429
telencephalon3.53e-1429
occipital lobe1.34e-0910
visual cortex1.34e-0910
neocortex1.34e-0910
regional part of cerebral cortex3.23e-0917
posterior neural tube6.38e-0912
chordal neural plate6.38e-0912
basal ganglion2.66e-088
nuclear complex of neuraxis2.66e-088
aggregate regional part of brain2.66e-088
collection of basal ganglia2.66e-088
cerebral subcortex2.66e-088
cerebral cortex6.32e-0821
cerebral hemisphere6.32e-0821
pallium6.32e-0821
spinal cord2.06e-076
dorsal region element2.06e-076
dorsum2.06e-076
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